Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2181 ATGGAAAATTTAGCAAATGGTGTGGTCCCAGAGCAAGAGCATCTTCCTGACAATTATCATTTTCAAGTCTACATCTCACTATTTATTAGAGTTTCTTTCACAGCTTCTTTTGTCTACCATGGATTCAATAATTCAGATCTGGTCCTTGATCAAGCTGCTATGATAACATCTTCTGGCTTGTTAATGCTAACCGACAGCTCCCCGTATGTTATAGGCCATGCCTTCAATCCCAATGCCCACCAGATGTTTGATAAAAGTTCTGAACTAGTTTCAGATGTTTCTTCTTTCAGCGCAACTTTTGTTTTTGCAATAGTTCCATCAACCTCTGGTCCACCCGTTGGTTACGGCCTAGCCTTTGTTATAGCTCCATCAACCAAATTTCCAGGTGCTCAAAGTGAACACTACTTGGGATTATTCAACTCCTCCAATAATGGAGACGCTTCAAATCATATCTTTTCAGTTGAATTTGATACTGTTAATGGCCTCGATGACCCTAAAAATTCAAAAGGCAACCACGTCGGGATCAACAAGAATGGTGTTCGATCAAATGCGTCTGAAACAGCTGAATATTCTGAAGTCTCTGATGTGAAGAAGGAGGTGTATTTGGATAGTGGTGAGCCAATCCAAGCCTGGATTGAATATGATCGCTTTAGTAAGTTTGTGAATGTCACAATTGCTCCCACAAATGTGAACAAACCAACTGAGCCATTGATTTCTTATGAGATAAATCTGACTTCAGTCTTAAAAGAGACGATGTTCGTTGGCTTCTCTGCATCAACAGGAAAAGAAACAAGCTTCCATTACATTTCAGGTTGGAGTTTTGCAATCAATAAACCAGCACCTCCGTTAAATCTTTCTCGACTTCCAATACCACCAAAAGCGGAAATTCCTTTGCCTTCATCGCCAACATTCAATCCTCTGGTCACCATTCTTGTGCCAATATTATCTGCTATGATATTTATGGGAATTTTGTTCTTAGCCTCTATATTCAGAAGAAGATTACAAGGTGAGAACCTTGAAGAATGGGAAAGAGATTGTCCTCACAGATTTAGTTATAAAGATCTTTGCAAAGCAACAAAGGGATTTAGAGACTCCGAGCTCGTTGGATCAGGGGGCTTTGGCTCGGTATACAGGGGTGTCTTACTTTCCACTGGAAGTGCAGTTGCTGTAAAGAAGGTAACACGAAATTCGAGCCAGGGAATGAGGGAATTCGCTGCCGAGATCGAAAGTTTGGGTCGACTACGACATAAGAACTTGGTCAATCTCCAAGGATGGTGCAAGAAAAAAAACGATCTTCTCTTGGTTTATGACTATGTTCCAAATGGAAGCTTGGATTCTCTCCTCTACCATCCAAAAGACAACTTTGTTCTGAATTGGGAACAAAGAATCAACATCCTCAAAGGCATTGCTGGTGGATTGCTATACCTACATGAAGAATGGGAGCGAGTAGTGATCCATCGAGATATTAAGCCAAGTAATGTCTTGATAGACATCGACATGAACGCTCGACTAAGTGACTTCGGTCTCGCAAGGTTATACGACCACGGCCAAATATCACATACAACCAGCGTTGTTGGCACGATTGGCTACATCTCGCCCGAGTTGGCACGCACAGGAAAAGCATCGAAAACTACCGACGTCTTTGCCTATGGAGTTCTAATCCTCGAAGTGGTTTGTGGAAGAAGACCTCTAGAATCAGATATATTCATATTGGTAGATTGGGTAATGGAATGCCATGAAAGAGGTTGTATTATTGATGCAGCTGATCCAAAGTTGAATGGAGTTTATGACATGGTTGAGATGGAGATGGCGTTGCAGCTTGGCCTTCTTTGTTCCCATCATAACCCTGAAGCTAGGCCAACTATGAGGCAAGTTACGAGATATCTTAATGGAGAAGACCAAATTCTTTCTATTGATCCTTCAACTTATTCTCAAGTTACCTTCCAATCTAACTCAGGATTCACTCAATTTATTCCACCTTCTTCGCATACTTCATCTACTAGTTTTATCTCTTCAAATTCCATAGATGTAGGTAGGTAA 2040 41.13 MENLANGVVPEQEHLPDNYHFQVYISLFIRVSFTASFVYHGFNNSDLVLDQAAMITSSGLLMLTDSSPYVIGHAFNPNAHQMFDKSSELVSDVSSFSATFVFAIVPSTSGPPVGYGLAFVIAPSTKFPGAQSEHYLGLFNSSNNGDASNHIFSVEFDTVNGLDDPKNSKGNHVGINKNGVRSNASETAEYSEVSDVKKEVYLDSGEPIQAWIEYDRFSKFVNVTIAPTNVNKPTEPLISYEINLTSVLKETMFVGFSASTGKETSFHYISGWSFAINKPAPPLNLSRLPIPPKAEIPLPSSPTFNPLVTILVPILSAMIFMGILFLASIFRRRLQGENLEEWERDCPHRFSYKDLCKATKGFRDSELVGSGGFGSVYRGVLLSTGSAVAVKKVTRNSSQGMREFAAEIESLGRLRHKNLVNLQGWCKKKNDLLLVYDYVPNGSLDSLLYHPKDNFVLNWEQRINILKGIAGGLLYLHEEWERVVIHRDIKPSNVLIDIDMNARLSDFGLARLYDHGQISHTTSVVGTIGYISPELARTGKASKTTDVFAYGVLILEVVCGRRPLESDIFILVDWVMECHERGCIIDAADPKLNGVYDMVEMEMALQLGLLCSHHNPEARPTMRQVTRYLNGEDQILSIDPSTYSQVTFQSNSGFTQFIPPSSHTSSTSFISSNSIDVGR 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 73536120 73538908 - Tan0015499.1 Tan08g2181 762073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2181 679 CDD STKc_IRAK 368 631 - -
Tan08g2181 679 ProSitePatterns Protein kinases ATP-binding region signature. 368 392 IPR017441 GO:0005524(InterPro)
Tan08g2181 679 Pfam Protein kinase domain 363 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2181 679 SUPERFAMILY Protein kinase-like (PK-like) 346 667 IPR011009 -
Tan08g2181 679 Gene3D Phosphorylase Kinase; domain 1 347 438 - -
Tan08g2181 679 FunFam L-type lectin-domain containing receptor kinase V.9 34 279 - -
Tan08g2181 679 Pfam Legume lectin domain 35 288 IPR001220 GO:0030246(InterPro)
Tan08g2181 679 ProSiteProfiles Protein kinase domain profile. 362 636 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2181 679 FunFam serine/threonine-protein kinase PBS1-like 331 438 - -
Tan08g2181 679 CDD lectin_legume_LecRK_Arcelin_ConA 36 277 IPR001220 GO:0030246(InterPro)
Tan08g2181 679 PANTHER - 42 636 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Tan08g2181 679 Gene3D - 33 281 - -
Tan08g2181 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2181 679 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 293 IPR013320 -
Tan08g2181 679 SMART serkin_6 362 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2181 679 FunFam L-type lectin-domain containing receptor kinase S.4 439 642 - -
Tan08g2181 679 Gene3D Transferase(Phosphotransferase) domain 1 439 642 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g2021 Tan-Chr8:72294741 Tan08g2181 Tan-Chr8:73536120 1.00E-162 dispersed
Tan08g2181 Tan-Chr8:73536120 Tan10g1894 Tan-Chr10:60525283 2.70E-208 dispersed
Tan08g2180 Tan-Chr8:73530101 Tan08g2181 Tan-Chr8:73536120 3.20E-241 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67988 PF00069 Pkinase 1.10E-50 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2181 - - - 0.0