Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2186 ATGGGAAAAAGCCACAACTCTCTGAGTGAATTTCAGGCGAACCCATTTCAGTTCATGCAGATTCCTGTACCAAAAACAGTTGATTGGTGCTTTAAATCACCCAATAAGAACAGAAAATGGAGGATCCAACAATGGAGAAACTGTTCTTCCTACCTCATTGCTCTGTTTTTTGCTCATCTTTTGGCTTTTTCTCTTCAACCGGTCACCGGCCAGATGTGGGATGGAGTGGCTGTTACACAGGGAGATTTTCAAGCTCTTCAGGCTATAAAGCATGAACTTATTGATCTAAAAGGAGCTTTACATAGCTGGAATGGCAGTAATGGAGCTTGTTCCGGGCAGTGGGCAGGAATCAAGTGTGTGAAGGGGCAGGTCATTGCTATACAGCTTCCGTGGAAGGCACTCGCCGGCCGGATTTCCGACAGGATTGGGCAGCTCCGGGAACTTCGGAAGCTCAGCCTCCACGACAATGTGATCTCCGGTAACATCCCTCGGTCGCTCGGGTACCTTCCGAATCTCAGAGGAATTTATCTTTTCAACAACAGATTTTCAGGTTCTATTCCTCCTACAATTGGTAATCTTCCACTTCTTCAAACTCTTGATTTGAGCAACAATTTGCTTACTGGAGAAATTCCTTCTGGTCTTGCAAATTCTACCAAATTGATTAGAGTTAATCTGAGCTACAATTCATTGTCGGGTTCTATTCCGAGTAGTTTTACGCAGTCTTTTTCTCTTATAATTCTTGCCCTTGAGCACAATAATATTTCTGGGACTTTCCCAGATTCTTGGGGTGGTTCTGGAAACAGAACTTGCCCACTTGGGGTTTTAACACTTGATCATAATGTTATATCTGGAACAATCCCAGCTTCTTTGAGTAAATTGGAAAGGCTTCAAGAGATTTCCATTAGTGAAAATAAGATCTCTGGGGCTATACCAGGTGAAATCGGCAGGTTGAAGAGGCTTCGCCTTTTGGATTTGTCGAACAACGCCATTAATGGCAGCTTCCCTTCAAGCTTCCCAAATCTCTCCTCTCTTGAGTTATTGAATGTTGAAAACAATCGCCTTGAAAGCCAGATTCCTGGAGATATTGATAGATTGCAGAATCTCTCAGTGGTTAAGCTTGGGAAGAATCGTTTTAGTGGTGAGATTCCTGCAAGTTTTGGGAATATCTCTGCTATTAACCAACTAGATTTCTCAGAAAATAACTTCACGGGACAGATTCCAACTTCATTGACCCGTTTGTTGAATCTAACGTCTTTCAATGTCTCTTACAACAATCTCTCGGGCCCTGTCCCAATTCTCCTGTCAAATAAGTTCAATGCGAGCTCTTTCGTTGGGAACCTTCAACTGTGTGGTTTTAGTTCTTCAACTCCATGTCTACCCGCATCCTCCCCTCATAATATTACAACCCCATCAATCGAGATCCCGAAACCGCATCGCCACCGCAAACTTAGTGTAAAGGACATAATTCTGATAGCGGCTGGAGCTCTGTTGGTGCTTCTACTTCTCCTTTGCTCGATTTTGCTTTGTTGTTTGTTGTCAAAAAGAGCTGCTGCCAAAAAGAATGACAACACGACAGCCAAGCAAGCTGCTGCGAGGAGTATCGAGAAGGCAGCACCGGGCAGTACCGAAGTCGGGGCAGGTGAAGCTGGTGGAAAATTAGTTCATTTTGATGGGCCATTGGTTTTCACTGCTGATGATCTTCTGTGTGCAACTGCCGAGATCATGGGTAAGAGCACATATGGAACAGCATACAAAGCAACATTAGAAGATGGCCATGAAGTTGCAGTGAAAAGATTGAGGGAAAAGACAACAAAGGGGCAGAAAGAATTTGAAACTGAAGTTGCAGGACTCGGAAAAATTCGACACCCGAATCTACTTGCTCTCAGAGCTTATTACTTAGGCCCCAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGCCTAGAGGAAGCCTCTCTTCCTTCCTTCATGCTCGTGGGCCGGAAACCACTGTCGATTGGCCGACAAGAATGAAGATAGCAATCGGAATCACGCAAGGGTTGAACTACCTCCACACAGAGGAGAATCTAATTCATGGAAACCTCACGTCCAGCAACATTCTGCTGGATGATCAGACCAATGCTCGTATTGCAGATTTTGGGCTTCCTAAGCTCATGACTTCAGCTGCAGCCACAAATGTGATTGCCACTGCAGGAACACAGGGCTACAATGCACCAGAGCTAACAAAAACCAAAAAACCCACAGCAAAGACAGATGTTTACAGCCTTGGAGTCATAATATTGGAACTTTTGACAGGAAAATCTCCTGGAGAAGCCATGGATGGAATGGATTTACCTCAGTGGGTGGCCTCAATAGTAAAGGAGGAGTGGACAAATGAAGTGTTTGATTTGGAGCTTATGAAATATACACCAAATATTGGCGATGAACTGCTAAACACTTTAAAACTTGCCCTGCATTGTGTGGATCCCTCGCCGGCGGCTCGGCCCGATGTTCAGCAAATTCTCCAGCAACTGGAGGAAATTAAAGCTTCTACTTCTGGTGATGATGGCGCCAAAAATCAACCAGCAAATGAATAG 2574 44.41 MGKSHNSLSEFQANPFQFMQIPVPKTVDWCFKSPNKNRKWRIQQWRNCSSYLIALFFAHLLAFSLQPVTGQMWDGVAVTQGDFQALQAIKHELIDLKGALHSWNGSNGACSGQWAGIKCVKGQVIAIQLPWKALAGRISDRIGQLRELRKLSLHDNVISGNIPRSLGYLPNLRGIYLFNNRFSGSIPPTIGNLPLLQTLDLSNNLLTGEIPSGLANSTKLIRVNLSYNSLSGSIPSSFTQSFSLIILALEHNNISGTFPDSWGGSGNRTCPLGVLTLDHNVISGTIPASLSKLERLQEISISENKISGAIPGEIGRLKRLRLLDLSNNAINGSFPSSFPNLSSLELLNVENNRLESQIPGDIDRLQNLSVVKLGKNRFSGEIPASFGNISAINQLDFSENNFTGQIPTSLTRLLNLTSFNVSYNNLSGPVPILLSNKFNASSFVGNLQLCGFSSSTPCLPASSPHNITTPSIEIPKPHRHRKLSVKDIILIAAGALLVLLLLLCSILLCCLLSKRAAAKKNDNTTAKQAAARSIEKAAPGSTEVGAGEAGGKLVHFDGPLVFTADDLLCATAEIMGKSTYGTAYKATLEDGHEVAVKRLREKTTKGQKEFETEVAGLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPRGSLSSFLHARGPETTVDWPTRMKIAIGITQGLNYLHTEENLIHGNLTSSNILLDDQTNARIADFGLPKLMTSAAATNVIATAGTQGYNAPELTKTKKPTAKTDVYSLGVIILELLTGKSPGEAMDGMDLPQWVASIVKEEWTNEVFDLELMKYTPNIGDELLNTLKLALHCVDPSPAARPDVQQILQQLEEIKASTSGDDGAKNQPANE 857
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 73573738 73577117 - Tan0021351.1 Tan08g2186 762078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2186 857 SMART LRR_typ_2 341 365 IPR003591 -
Tan08g2186 857 SMART LRR_typ_2 145 169 IPR003591 -
Tan08g2186 857 SMART LRR_typ_2 317 340 IPR003591 -
Tan08g2186 857 SMART LRR_typ_2 193 217 IPR003591 -
Tan08g2186 857 SUPERFAMILY Protein kinase-like (PK-like) 573 841 IPR011009 -
Tan08g2186 857 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 296 844 IPR052451 -
Tan08g2186 857 Pfam Leucine rich repeat 274 330 IPR001611 GO:0005515(InterPro)
Tan08g2186 857 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 271 338 - -
Tan08g2186 857 CDD STKc_IRAK 575 840 - -
Tan08g2186 857 Gene3D Transferase(Phosphotransferase) domain 1 647 854 - -
Tan08g2186 857 Pfam Protein tyrosine and serine/threonine kinase 573 837 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2186 857 MobiDBLite consensus disorder prediction 838 857 - -
Tan08g2186 857 SUPERFAMILY L domain-like 106 450 - -
Tan08g2186 857 FunFam Pollen receptor-like kinase 1 646 851 - -
Tan08g2186 857 PRINTS Leucine-rich repeat signature 196 209 - -
Tan08g2186 857 PRINTS Leucine-rich repeat signature 317 330 - -
Tan08g2186 857 Gene3D Phosphorylase Kinase; domain 1 575 646 - -
Tan08g2186 857 FunFam Leucine-rich repeat receptor-like protein kinase 554 645 - -
Tan08g2186 857 Pfam Leucine rich repeat N-terminal domain 81 119 IPR013210 -
Tan08g2186 857 Gene3D Ribonuclease Inhibitor 79 271 IPR032675 -
Tan08g2186 857 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 339 458 - -
Tan08g2186 857 ProSiteProfiles Protein kinase domain profile. 569 840 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2186 857 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 80 233 - -
Tan08g2186 857 Gene3D Ribonuclease Inhibitor 272 462 IPR032675 -
Tan08g2186 857 Pfam Leucine Rich Repeat 220 239 IPR001611 GO:0005515(InterPro)
Tan08g2186 857 Pfam Leucine Rich Repeat 148 169 IPR001611 GO:0005515(InterPro)
Tan08g2186 857 Pfam Leucine Rich Repeat 415 436 IPR001611 GO:0005515(InterPro)
Tan08g2186 857 Pfam Leucine Rich Repeat 394 413 IPR001611 GO:0005515(InterPro)
Tan08g2186 857 Pfam Leucine Rich Repeat 196 216 IPR001611 GO:0005515(InterPro)
Tan08g2186 857 Pfam Leucine Rich Repeat 171 193 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1379 Tan-Chr4:15185544 Tan08g2186 Tan-Chr8:73573738 3.10E-169 dispersed
Tan06g1322 Tan-Chr6:16002114 Tan08g2186 Tan-Chr8:73573738 2.60E-65 dispersed
Tan08g2186 Tan-Chr8:73573738 Tan09g1335 Tan-Chr9:65636570 3.40E-70 dispersed
Tan08g2186 Tan-Chr8:73573738 Tan08g2187 Tan-Chr8:73573738 2.50E-182 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67989 PF07714 PK_Tyr_Ser-Thr 9.30E-41 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2186 - - - 0.0