Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2187 ATGGGAAAAAGCCACAACTCTCTGAGTGAATTTCAGGCGAACCCATTTCAGTTCATGCAGATTCCTGTACCAAAAACAGTTGATTGGTGCTTTAAATCACCCAATAAGAACAGAAAATGGAGGATCCAACAATGGAGAAACTGTTCTTCCTACCTCATTGCTCTGTTTTTTGCTCATCTTTTGGCTTTTTCTCTTCAACCGGTCACCGGCCAGATGTGGGATGGAGTGGCTGTTACACAGGGAGATTTTCAAGCTCTTCAGGCTATAAAGCATGAACTTATTGATCTAAAAGGAGCTTTACATAGCTGGAATGGCAGTAATGGAGCTTGTTCCGGGCAGTGGGCAGGAATCAAGTGTGTGAAGGGGCAGGTCATTGCTATACAGCTTCCGTGGAAGGCACTCGCCGGCCGGATTTCCGACAGGATTGGGCAGCTCCGGGAACTTCGGAAGCTCAGCCTCCACGACAATGTGATCTCCGGTAACATCCCTCGGTCGCTCGGGTACCTTCCGAATCTCAGAGGAATTTATCTTTTCAACAACAGATTTTCAGGTTCTATTCCTCCTACAATTGGTAATCTTCCACTTCTTCAAACTCTTGATTTGAGCAACAATTTGCTTACTGGAGAAATTCCTTCTGGTCTTGCAAATTCTACCAAATTGATTAGAGTTAATCTGAGCTACAATTCATTGTCGGGTTCTATTCCGAGTAGTTTTACGCAGTCTTTTTCTCTTATAATTCTTGCCCTTGAGCACAATAATATTTCTGGGACTTTCCCAGATTCTTGGGGTGGTTCTGGAAACAGAACTTGCCCACTTGGGGTTTTAACACTTGATCATAATGTTATATCTGGAACAATCCCAGCTTCTTTGAGTAAATTGGAAAGGCTTCAAGAGATTTCCATTAGTGAAAATAAGATCTCTGGGGCTATACCAGGTGAAATCGGCAGGTTGAAGAGGCTTCGCCTTTTGGATTTGTCGAACAACGCCATTAATGGCAGCTTCCCTTCAAGCTTCCCAAATCTCTCCTCTCTTGAGTTATTGAATGTTGAAAACAATCGCCTTGAAAGCCAGATTCCTGGAGATATTGATAGATTGCAGAATCTCTCAGTGGTTAAGCTTGGGAAGAATCGTTTTAGTGGTGAGATTCCTGCAAGTTTTGGGAATATCTCTGCTATTAACCAACTAGATTTCTCAGAAAATAACTTCACGGGACAGATTCCAACTTCATTGACCCGTTTGTTGAATCTAACGTCTTTCAATGTCTCTTACAACAATCTCTCGGGCCCTGTCCCAATTCTCCTGTCAAATAAGTTCAATGCGAGCTCTTTCGTTGGGAACCTTCAACTGTGTGGTTTTAGTTCTTCAACTCCATGTCTACCCGCATCCTCCCCTCATAATATTACAACCCCATCAATCGAGATCCCGAAACCGCATCGCCACCGCAAACTTAGTGTAAAGGACATAATTCTGATAGCGGCTGGAGCTCTGTTGGTGCTTCTACTTCTCCTTTGCTCGATTTTGCTTTGTTGTTTGTTGTCAAAAAGAGCTGCTGCCAAAAAGAATGACAACACGACAGCCAAGCAAGCTGCTGCGAGGAGTATCGAGAAGGCAGCACCGGGCAGTACCGAAGTCGGGGCAGGTGAAGCTGGTGGAAAATTAGTTCATTTTGATGGGCCATTGGTTTTCACTGCTGATGATCTTCTGTGTGCAACTGCCGAGATCATGGGTAAGAGCACATATGGAACAGCATACAAAGCAACATTAGAAGATGGCCATGAAGTTGCAGTGAAAAGATTGAGGGAAAAGACAACAAAGGGGCAGAAAGAATTTGAAACTGAAGTTGCAGGACTCGGAAAAATTCGACACCCGAATCTACTTGCTCTCAGAGCTTATTACTTAGGCCCCAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGCCTAGAGGAAGCCTCTCTTCCTTCCTTCATGGTAAGCAAAGTCAACAATTTGCTCAACAAATTTACTATCATGAATTTTTTTAA 2022 43.47 MGKSHNSLSEFQANPFQFMQIPVPKTVDWCFKSPNKNRKWRIQQWRNCSSYLIALFFAHLLAFSLQPVTGQMWDGVAVTQGDFQALQAIKHELIDLKGALHSWNGSNGACSGQWAGIKCVKGQVIAIQLPWKALAGRISDRIGQLRELRKLSLHDNVISGNIPRSLGYLPNLRGIYLFNNRFSGSIPPTIGNLPLLQTLDLSNNLLTGEIPSGLANSTKLIRVNLSYNSLSGSIPSSFTQSFSLIILALEHNNISGTFPDSWGGSGNRTCPLGVLTLDHNVISGTIPASLSKLERLQEISISENKISGAIPGEIGRLKRLRLLDLSNNAINGSFPSSFPNLSSLELLNVENNRLESQIPGDIDRLQNLSVVKLGKNRFSGEIPASFGNISAINQLDFSENNFTGQIPTSLTRLLNLTSFNVSYNNLSGPVPILLSNKFNASSFVGNLQLCGFSSSTPCLPASSPHNITTPSIEIPKPHRHRKLSVKDIILIAAGALLVLLLLLCSILLCCLLSKRAAAKKNDNTTAKQAAARSIEKAAPGSTEVGAGEAGGKLVHFDGPLVFTADDLLCATAEIMGKSTYGTAYKATLEDGHEVAVKRLREKTTKGQKEFETEVAGLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPRGSLSSFLHGKQSQQFAQQIYYHEFF 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 73573738 73577117 - Tan0021351.2 Tan08g2187 762079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2187 673 FunFam Leucine-rich repeat receptor-like protein kinase 554 645 - -
Tan08g2187 673 SMART LRR_typ_2 341 365 IPR003591 -
Tan08g2187 673 SMART LRR_typ_2 145 169 IPR003591 -
Tan08g2187 673 SMART LRR_typ_2 193 217 IPR003591 -
Tan08g2187 673 SMART LRR_typ_2 317 340 IPR003591 -
Tan08g2187 673 SUPERFAMILY Protein kinase-like (PK-like) 573 659 IPR011009 -
Tan08g2187 673 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 80 233 - -
Tan08g2187 673 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 271 338 - -
Tan08g2187 673 SUPERFAMILY L domain-like 106 450 - -
Tan08g2187 673 ProSiteProfiles Protein kinase domain profile. 569 673 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2187 673 Gene3D Ribonuclease Inhibitor 79 271 IPR032675 -
Tan08g2187 673 Gene3D Phosphorylase Kinase; domain 1 575 646 - -
Tan08g2187 673 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 339 458 - -
Tan08g2187 673 PRINTS Leucine-rich repeat signature 317 330 - -
Tan08g2187 673 PRINTS Leucine-rich repeat signature 196 209 - -
Tan08g2187 673 Gene3D Ribonuclease Inhibitor 272 462 IPR032675 -
Tan08g2187 673 Pfam Leucine rich repeat N-terminal domain 81 119 IPR013210 -
Tan08g2187 673 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 134 659 IPR050647 -
Tan08g2187 673 Pfam Leucine rich repeat 274 330 IPR001611 GO:0005515(InterPro)
Tan08g2187 673 Pfam Leucine Rich Repeat 394 413 IPR001611 GO:0005515(InterPro)
Tan08g2187 673 Pfam Leucine Rich Repeat 415 436 IPR001611 GO:0005515(InterPro)
Tan08g2187 673 Pfam Leucine Rich Repeat 220 239 IPR001611 GO:0005515(InterPro)
Tan08g2187 673 Pfam Leucine Rich Repeat 148 169 IPR001611 GO:0005515(InterPro)
Tan08g2187 673 Pfam Protein tyrosine and serine/threonine kinase 573 665 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2187 673 Pfam Leucine Rich repeats (2 copies) 170 207 IPR025875 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g2187 Tan-Chr8:73573738 Tan08g0198 Tan-Chr8:1771376 2.00E-25 dispersed
Tan08g2186 Tan-Chr8:73573738 Tan08g2187 Tan-Chr8:73573738 2.50E-182 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67990 PF07714 PK_Tyr_Ser-Thr 5.90E-12 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2187 - - - 0.0