Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2223 ATGAATTGTAACGAGAAGAACAGCGGGGGAGATGATAGGGAAACTGAGCAGCAGCCAGTTAAGAGAAACTCTGTTGAGGCAGAACGGAAAACGGTCATCCAAAATGGATCCATAACGGCCCAACAGTTGACGATAGATGATAATCTTCTTGTTGACCCGAAATTACTATTCATTGGATCGAAGATTGGCGAGGGTGCTCATGGGAAAGTTTATGAAGGCAGGTACCGGAACCAAATTGTGGCCATTAAAGTTCTCCATCGTGGGAGTACTCCAGAAGAAAGGGCAGCGCTTGAGAATCGTTTTGCCCGTGAAGTTAATATGATGTCCCGAGTAAAACATGAAAATCTTGTCAAGTTTATTGGAGCTTGTAAAGAACCTCTAATGGTGATAGTTACAGAGCTATTACCAGGAATGTCACTCAGGAAGTATCTGATGAATAATCGTAAGCAACAGCTGGATCCTCGGATGGCCATTAACTTTGCTTTGGATGTTGCTCGTGCTATGGATTGTCTTCATGCGAACGGGATTATACATAGAGATCTTAAACCTGACAATTTGTTGCTTACGGCAAATCAAAGATCTGTGAAGCTTGCAGACTTTGGACTTGCTAGAGAGGAATCTGTCACTGAGATGATGACTGCAGAAACAGGGACTTACCGCTGGATGGCTCCTGAGTTGTACAGCACTGTGACATTGCGCCAGGGAGAGAAGAAGCATTATAACAACAAGGTTGATGTATACAGCTTTGGAATCGTCTTATGGGAACTCTTGACCAACCGAATGCCATTTGAAGGGATGTCCAATTTGCAAGCTGCATATGCTGCCGCTTTCAAGCAAGAGAGACCTAGTATTCCAGGCGACATACCTCCCGATCTAGCGTTTATAGTTCAGTCGTGTTGGGTTGAAGATCCTAACATGAGACCCAGCTTCAGCCAGATCATCCGCATGCTTAATGAATATCTATTTACACTCCCACCTCCTTCACCATCTTCACCGGCATCTGATACAACCGAGACAGCAACGACTAGCAATGGTGCTATTACCGAGTTCTCTGCTCGTGCAAGAGGAAAGTTTGGATTCCTTCGCCAACTGTTTGCTGCTAAGAAGGCTAAGAACTCGCAATAA 1125 44.71 MNCNEKNSGGDDRETEQQPVKRNSVEAERKTVIQNGSITAQQLTIDDNLLVDPKLLFIGSKIGEGAHGKVYEGRYRNQIVAIKVLHRGSTPEERAALENRFAREVNMMSRVKHENLVKFIGACKEPLMVIVTELLPGMSLRKYLMNNRKQQLDPRMAINFALDVARAMDCLHANGIIHRDLKPDNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPSPSSPASDTTETATTSNGAITEFSARARGKFGFLRQLFAAKKAKNSQ 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 73840664 73844826 + Tan0013471.1 Tan08g2223 762115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2223 374 ProSitePatterns Protein kinases ATP-binding region signature. 62 83 IPR017441 GO:0005524(InterPro)
Tan08g2223 374 MobiDBLite consensus disorder prediction 333 347 - -
Tan08g2223 374 MobiDBLite consensus disorder prediction 7 28 - -
Tan08g2223 374 CDD STKc_MAP3K-like 62 317 - -
Tan08g2223 374 SMART serkin_6 56 321 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2223 374 PANTHER SERINE-THREONINE PROTEIN KINASE 43 319 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan08g2223 374 ProSiteProfiles Protein kinase domain profile. 56 321 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2223 374 Gene3D Transferase(Phosphotransferase) domain 1 139 344 - -
Tan08g2223 374 MobiDBLite consensus disorder prediction 1 28 - -
Tan08g2223 374 MobiDBLite consensus disorder prediction 327 347 - -
Tan08g2223 374 FunFam Kinase suppressor of Ras 1 45 135 - -
Tan08g2223 374 Pfam Protein tyrosine and serine/threonine kinase 58 317 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2223 374 SUPERFAMILY Protein kinase-like (PK-like) 55 336 IPR011009 -
Tan08g2223 374 PRINTS Tyrosine kinase catalytic domain signature 244 266 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2223 374 PRINTS Tyrosine kinase catalytic domain signature 132 145 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2223 374 PRINTS Tyrosine kinase catalytic domain signature 170 188 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2223 374 PRINTS Tyrosine kinase catalytic domain signature 288 310 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2223 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2223 374 Gene3D Phosphorylase Kinase; domain 1 44 135 - -
Tan08g2223 374 FunFam serine/threonine-protein kinase HT1 137 338 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1408 Tan-Chr7:65124226 Tan08g2223 Tan-Chr8:73840664 1.50E-117 dispersed
Tan08g2223 Tan-Chr8:73840664 Tan09g2306 Tan-Chr9:72970771 5.70E-115 dispersed
Tan08g2223 Tan-Chr8:73840664 Tan08g2224 Tan-Chr8:73840664 2.50E-211 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67991 PF07714 PK_Tyr_Ser-Thr 6.20E-62 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2223 - - - 0.0