Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2258 ATGGGCAACTGCGGTACTAGAGAAGAGTCTGCAGTTGTTTCCAATGCTCAAGTTCAACAGCTGCATACTTCATCGTCTTCCTTGGCTGTGAAAAACGCCAGCAACAATGCTACAGATAAAAGGCATGTTCATAACCGGTCCATATCAGATCTAAGCGATCCTTCGACCCCTCGTAACCTCGAGGACTTTAGAAAGAATTCGGTGCTTTACACCCATATTATTGCCTTCACATTATACGAGCTGGAAACTATCACCAAGAGTTTCCGTTCCGATTACATTCTCGGAGAGGGCGGGTTTGGAACTGTTTATAAAGGCTACATTGACGAGAACGTCAGGGTTGGCCTCAAATCTCTTCCTGTTGCTGTAAAGGTTCTCAATAAGGAAGGCCTCCAGGGTCACCGAGAATGGCTTACAGAAGTCAACTTTCTTGGTCAGCTAAGACATCCAAACCTTGTAAAGTTGATTGGTTACTGCTGCGAGGACGATCACAGATTACTTGTCTACGAGTTCATGTTTAGAGGAAGCCTTGAAAACCACCTCTTTCGAAAGACATCTGTTCCATTGCCATGGGCAAGAAGAATGATGATAGCTCTTGGAGCGGCCAAGGGACTTGCTTTCCTACACAATGCTGAAAGGCCCGTTATCTATCGGGATTTTAAAACCTCTAATATACTGTTGGACTCTGACTATACAGCCAAGCTTTCTGATTTTGGGCTTGCAAAAGCTGGACCTCAAGGTGATGAGACACATGTTTCAACTCGAGTAATGGGTACTTATGGTTATGCTGCCCCTGAATATGTCATGACTGGGCACTTGACAGCAAGGAGTGATGTATACAGCTTCGGTGTTGTTCTTCTGGAGCTTTTGACAGGAAGAAAGTCTGTTGACAAGACAAAACCAAGCAAGGAGCAGAATTTGGTAGATTGGGCTCGACCTAAACTAAATGACAAGAGGAAGTTGCTACAAATAATTGACCCCAGATTAGAAAACCAATACTCGATAAGGGCAGCACAGAAGGCCTGCAGCCTGGCGTACTATTGCCTGAGCCAGAATCCCAAAGCAAGACCATTAATGAGTGATGTGGTCGAAACTTTGGAACCATTACAGAGCAGTAACGGTGCAACTGAATACTCATCAGCAGGAACTAGTCCATTTGTTAGGGGAGGCATCCCTGATTACAGGATGCGGCAAAGGTTTACGGACAACGTCGGTCCGGGGTCTAGTTGCCGGTCTCCTAACTCCAACTGTTCTCCGACCGGCCCTGCAGCATGTAGGGTTAGATAA 1284 45.87 MGNCGTREESAVVSNAQVQQLHTSSSSLAVKNASNNATDKRHVHNRSISDLSDPSTPRNLEDFRKNSVLYTHIIAFTLYELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKTSVPLPWARRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTKPSKEQNLVDWARPKLNDKRKLLQIIDPRLENQYSIRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSNGATEYSSAGTSPFVRGGIPDYRMRQRFTDNVGPGSSCRSPNSNCSPTGPAACRVR 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 74036737 74052296 + Tan0001532.1 Tan08g2258 762150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2258 427 Gene3D Phosphorylase Kinase; domain 1 51 170 - -
Tan08g2258 427 Gene3D Transferase(Phosphotransferase) domain 1 171 383 - -
Tan08g2258 427 MobiDBLite consensus disorder prediction 402 427 - -
Tan08g2258 427 MobiDBLite consensus disorder prediction 402 420 - -
Tan08g2258 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2258 427 MobiDBLite consensus disorder prediction 34 56 - -
Tan08g2258 427 CDD STKc_IRAK 94 368 - -
Tan08g2258 427 ProSiteProfiles Protein kinase domain profile. 88 369 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2258 427 SUPERFAMILY Protein kinase-like (PK-like) 63 366 IPR011009 -
Tan08g2258 427 ProSitePatterns Protein kinases ATP-binding region signature. 94 123 IPR017441 GO:0005524(InterPro)
Tan08g2258 427 Pfam Protein kinase domain 92 363 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2258 427 FunFam Probable serine/threonine-protein kinase PBL8 171 383 - -
Tan08g2258 427 PANTHER OS01G0588500 PROTEIN-RELATED 65 370 IPR050823 -
Tan08g2258 427 FunFam Serine/threonine-protein kinase BIK1 54 170 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0127 Tan-Chr6:1179314 Tan08g2258 Tan-Chr8:74036737 1.70E-108 dispersed
Tan08g0927 Tan-Chr8:13205069 Tan08g2258 Tan-Chr8:74036737 2.50E-126 dispersed
Tan08g0928 Tan-Chr8:13206568 Tan08g2258 Tan-Chr8:74036737 1.10E-83 dispersed
Tan08g2258 Tan-Chr8:74036737 Tan09g1010 Tan-Chr9:62192749 2.40E-125 dispersed
Tan08g2258 Tan-Chr8:74036737 Tan08g0013 Tan-Chr8:412776 2.50E-127 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67998 PF00069 Pkinase 5.50E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2258 - - - 0.0