Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g2259 | ATGTTGTTGTCGTCAGCTCTGCAAACGCTGCTGCTTTTGGCTTTCGTCTACGCGGGAATCGATATCGCTGCTTCTTTTACTGATCCTCGCGATTATGTGGCGCTGGAGTCCTTGAGAAACGAATGGCAAAATACACCACCAAGCTGGGGAACATCAAATGATCCTTGTGGAACTCCCTGGGAAGGAGTGACTTGCAACAATTCGAGAGTAACTGCACTGAGATTATCAACTATGGGCCTAAAAGGTCAACTTGGTGGTGACATTGGAGGCCTGACTGAACTAATATCATTGGACCTTTCGTTCAATAAAGATCTCACTGGTTCAATCTCTCCAGCATTAGGGGATCTACAGAATTTGAATATCTTGATCCTAGCTGGGTGTGGCTTCAGTGGCAAGATTCCTGAAGAACTGGGCAATCTTTCTCAGCTATCCTTCTTGGCTTTAAATTCTAACAACTTCACTGATACCATACCACCATCTCTGGGTAAACTCTCCCATCTCTATTGGCTGGACCTGGCAGATAATCAATTAACAGGTAGTCTCCCAGTCTCAACTTCCCAATCTCCTGGCTTGGACCTCCTTCTGAAGGCTAAACATTTTCATTTCAACAAAAACCAGCTATCAGGTTCCATTCCACCTAAACTTTTTAGCTCTGAAATGGTGTTAATACACATATTATTTGATGGAAATAAATTGTCTGGGAGTATCCCGCCAACATTGGGACTTGTTAAGACCCTTGAGGTTCTTCGACTTGATCGGAATTCTCTAACAGGACCTGTCCCATCAAATCTGAACAACCTAACAAAAGTCAATGAATTGAATTTAGCCAACAATAAGTTGACTGGTCCAATACCAAACTTAACTGAAATGAATTCCCTAAATTATGTGGACCTTAGTAACAACTCATTTGATTCATCAGCAGCTCCGGAATGGTTCTCAAATCTACCATTGCTCACCACTCTGGTTTTTGAACATGGGTCAATACAAGGATCTGTGCCAGAAGGAGTCTTTAGCTTACCACAAATACAACAAATAAAACTCAAGAACAACGCATTCAATGGGACATTAGATATGGGGAACAAAATTAGCCAACAGTTGCAGCTCGTTGATTTGCAAAGTAACAATATTTCCCAATTTACCTTTGGTTCAGGATATTCCAAAATTTTGATGCTGATAGGGAATCCTGTGTGTATCACTGATAGTACCCTCTCAAATACGGACTATTGCCAGCTTCAAAATCATCCGGTGAAACCCTATTCTACCAGCCTTTTGACGTGTGGAAATAAGTTGTGTCCTCCTGACGAGGAGTTAAACCCTCAGAGTTGTGAATGTGCCTATCCATTTGAAGGGACTTTATACTTCAGAGCACCCTCGTTCAGGGGATTGTCCAATGCAACTTTGTTTAACTCATTGGAACGGACTCTTTGGGAAAAACTAAAGCTTACGCCTGGTTCAGTTTCTCTTCAAAACCTTTTCTTTAATGTTGACGATTATCTTCAGATGCAGCTTGCACTTTTTCCACCCAATGGAAAGTATTTTAATAGGTCAGAGATTCAGAGGATTGGGTTTGACTTGAGTAATCAAACTTACAAACCTCCCCCAGAATTTGGGCCATATTATTTCATTGCATCTCCCTATGGTTTTTCAGACACGGCTAGGGGAAGTTCAATCAGCCATGGAGTGATAATTGGGGTAGCTATTGGTTGTGCCTTTCTCGTTCTAGGCCTCGTTGGAGTCGGAATATATGCGATTCGGCAAAAGAAACGTGCAGAAAAGGCCATTGGATTGAGTCGTCCATTTGCTTCTTGGGCTCCAAGTGGAAATGATAGTGGAGGTGCACCACAATTGAAGGGAGCCAGATGGTTTTCTTATGATGAGCTTAAAAAAAGCACAAATAATTTCTCCATGAGCAATGAAATAGGATCTGGAGGATATGGCAAGGTATACAGAGGACTGCTTGTGGATGGACTAGTAGTTGCGATCAAAAGAGCTCAACAAGGATCAATGCAGGGTGGCCTTGAGTTCAAGACGGAAATCGAACTGCTTTCACGAGTTCATCACAAGAACCTTCTTGGCCTCGTGGGATTTTGTTTTGAACAAGGAGAACAGATGCTTGTTTATGAATTTATGCCTAATGGAACACTTAGAGATAGCCTATCTGGAAAATCTGGTATCAATCTTGATTGGAAGAGAAGACTTCGCATTGCACTTGGGTCTGCCAGAGGATTGACTTACTTACATGAACTTGCTAATCCTCCCATAATCCATAGAGACATTAAGTCCACCAACATTCTGTTGGATGAACATTTAAATGCAAAAGTTGCAGACTTTGGTTTGTCAAAGCTTGTCTCAGACAGTGAAAAGGGACATGTTTCTACTCAAGTTAAAGGAACACTGGGCTATTTGGATCCTGAATATTACATGACTCAACAATTGACTGAGAAAAGTGATGTATATAGCTTTGGAGTAGTCATGCTTGAACTGCTCACTGCTAAGCTGCCTATTGAAAAAGGAAAGTATGTAGTTCGTGAGGTGCGTATGCTGATGAACAAAAATGAAGAAGAATATTACGGTCTGAAGCAGATAATGGATGCAAACATAGTAAACAACAATACAACGACTATTATTGGGCTTGGAAGGTTCTTGGAGTTGGCAATGCAATGCGTTGAAGAATCAGCTGAAGAGCGTCCCACGATGAGTGAAGTGGTGAAGATAATTGAGAGTATTTTGCAGAGTGATGGAATAAACACGAACACGACATCGGCATCCTCGTCTGCAACCGAGTTTGGGACTTCCAAAACTGCTCCTAGGCATCCTTATAATGATCCTATAACAAAAAAGGACACTAATGACAGTAATGCTTTTGATTACAGTGGTGGATACACTCTTTCAACAAAAGTGGAGCCCAAATAG | 2913 | 41.57 | MLLSSALQTLLLLAFVYAGIDIAASFTDPRDYVALESLRNEWQNTPPSWGTSNDPCGTPWEGVTCNNSRVTALRLSTMGLKGQLGGDIGGLTELISLDLSFNKDLTGSISPALGDLQNLNILILAGCGFSGKIPEELGNLSQLSFLALNSNNFTDTIPPSLGKLSHLYWLDLADNQLTGSLPVSTSQSPGLDLLLKAKHFHFNKNQLSGSIPPKLFSSEMVLIHILFDGNKLSGSIPPTLGLVKTLEVLRLDRNSLTGPVPSNLNNLTKVNELNLANNKLTGPIPNLTEMNSLNYVDLSNNSFDSSAAPEWFSNLPLLTTLVFEHGSIQGSVPEGVFSLPQIQQIKLKNNAFNGTLDMGNKISQQLQLVDLQSNNISQFTFGSGYSKILMLIGNPVCITDSTLSNTDYCQLQNHPVKPYSTSLLTCGNKLCPPDEELNPQSCECAYPFEGTLYFRAPSFRGLSNATLFNSLERTLWEKLKLTPGSVSLQNLFFNVDDYLQMQLALFPPNGKYFNRSEIQRIGFDLSNQTYKPPPEFGPYYFIASPYGFSDTARGSSISHGVIIGVAIGCAFLVLGLVGVGIYAIRQKKRAEKAIGLSRPFASWAPSGNDSGGAPQLKGARWFSYDELKKSTNNFSMSNEIGSGGYGKVYRGLLVDGLVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLLGLVGFCFEQGEQMLVYEFMPNGTLRDSLSGKSGINLDWKRRLRIALGSARGLTYLHELANPPIIHRDIKSTNILLDEHLNAKVADFGLSKLVSDSEKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELLTAKLPIEKGKYVVREVRMLMNKNEEEYYGLKQIMDANIVNNNTTTIIGLGRFLELAMQCVEESAEERPTMSEVVKIIESILQSDGINTNTTSASSSATEFGTSKTAPRHPYNDPITKKDTNDSNAFDYSGGYTLSTKVEPK | 970 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 74060821 | 74069064 | + | Tan0021763.1 | Tan08g2259 | 762151 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g2259 | 970 | Gene3D | Phosphorylase Kinase; domain 1 | 608 | 709 | - | - | |
Tan08g2259 | 970 | FunFam | LRR receptor-like serine/threonine-protein kinase HSL2 | 710 | 922 | - | - | |
Tan08g2259 | 970 | Pfam | Protein tyrosine and serine/threonine kinase | 635 | 904 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan08g2259 | 970 | SUPERFAMILY | Protein kinase-like (PK-like) | 619 | 920 | IPR011009 | - | |
Tan08g2259 | 970 | SUPERFAMILY | L domain-like | 289 | 403 | - | - | |
Tan08g2259 | 970 | CDD | STKc_IRAK | 640 | 909 | - | - | |
Tan08g2259 | 970 | ProSitePatterns | Protein kinases ATP-binding region signature. | 640 | 662 | IPR017441 | GO:0005524(InterPro) | |
Tan08g2259 | 970 | MobiDBLite | consensus disorder prediction | 916 | 970 | - | - | |
Tan08g2259 | 970 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 47 | 907 | - | - | |
Tan08g2259 | 970 | Gene3D | Transferase(Phosphotransferase) domain 1 | 710 | 931 | - | - | |
Tan08g2259 | 970 | Pfam | Leucine rich repeat N-terminal domain | 30 | 66 | IPR013210 | - | |
Tan08g2259 | 970 | MobiDBLite | consensus disorder prediction | 916 | 934 | - | - | |
Tan08g2259 | 970 | FunFam | Leucine-rich repeat family protein | 30 | 186 | - | - | |
Tan08g2259 | 970 | SUPERFAMILY | L domain-like | 38 | 303 | - | - | |
Tan08g2259 | 970 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 754 | 766 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan08g2259 | 970 | ProSiteProfiles | Protein kinase domain profile. | 634 | 910 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan08g2259 | 970 | SMART | serkin_6 | 634 | 910 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan08g2259 | 970 | Gene3D | Ribonuclease Inhibitor | 190 | 412 | IPR032675 | - | |
Tan08g2259 | 970 | Gene3D | Ribonuclease Inhibitor | 31 | 189 | IPR032675 | - | |
Tan08g2259 | 970 | Pfam | Leucine Rich Repeat | 246 | 267 | IPR001611 | GO:0005515(InterPro) | |
Tan08g2259 | 970 | Pfam | Leucine Rich Repeat | 118 | 140 | IPR001611 | GO:0005515(InterPro) | |
Tan08g2259 | 970 | Pfam | Leucine Rich Repeat | 292 | 315 | IPR001611 | GO:0005515(InterPro) | |
Tan08g2259 | 970 | Pfam | Leucine Rich Repeat | 143 | 164 | IPR001611 | GO:0005515(InterPro) | |
Tan08g2259 | 970 | FunFam | Leucine-rich repeat protein kinase family protein | 603 | 709 | - | - | |
Tan08g2259 | 970 | MobiDBLite | consensus disorder prediction | 946 | 960 | - | - | |
Tan08g2259 | 970 | FunFam | Predicted protein | 189 | 432 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan08g2259 | Tan-Chr8:74060821 | Tan10g1504 | Tan-Chr10:23066185 | 0.00E+00 | dispersed | |
Tan08g2259 | Tan-Chr8:74060821 | Tan03g0690 | Tan-Chr3:62368830 | 1.80E-96 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67999 | PF07714 | PK_Tyr_Ser-Thr | 5.10E-48 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g2259 | - | - | - | 0.0 |