Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2259 ATGTTGTTGTCGTCAGCTCTGCAAACGCTGCTGCTTTTGGCTTTCGTCTACGCGGGAATCGATATCGCTGCTTCTTTTACTGATCCTCGCGATTATGTGGCGCTGGAGTCCTTGAGAAACGAATGGCAAAATACACCACCAAGCTGGGGAACATCAAATGATCCTTGTGGAACTCCCTGGGAAGGAGTGACTTGCAACAATTCGAGAGTAACTGCACTGAGATTATCAACTATGGGCCTAAAAGGTCAACTTGGTGGTGACATTGGAGGCCTGACTGAACTAATATCATTGGACCTTTCGTTCAATAAAGATCTCACTGGTTCAATCTCTCCAGCATTAGGGGATCTACAGAATTTGAATATCTTGATCCTAGCTGGGTGTGGCTTCAGTGGCAAGATTCCTGAAGAACTGGGCAATCTTTCTCAGCTATCCTTCTTGGCTTTAAATTCTAACAACTTCACTGATACCATACCACCATCTCTGGGTAAACTCTCCCATCTCTATTGGCTGGACCTGGCAGATAATCAATTAACAGGTAGTCTCCCAGTCTCAACTTCCCAATCTCCTGGCTTGGACCTCCTTCTGAAGGCTAAACATTTTCATTTCAACAAAAACCAGCTATCAGGTTCCATTCCACCTAAACTTTTTAGCTCTGAAATGGTGTTAATACACATATTATTTGATGGAAATAAATTGTCTGGGAGTATCCCGCCAACATTGGGACTTGTTAAGACCCTTGAGGTTCTTCGACTTGATCGGAATTCTCTAACAGGACCTGTCCCATCAAATCTGAACAACCTAACAAAAGTCAATGAATTGAATTTAGCCAACAATAAGTTGACTGGTCCAATACCAAACTTAACTGAAATGAATTCCCTAAATTATGTGGACCTTAGTAACAACTCATTTGATTCATCAGCAGCTCCGGAATGGTTCTCAAATCTACCATTGCTCACCACTCTGGTTTTTGAACATGGGTCAATACAAGGATCTGTGCCAGAAGGAGTCTTTAGCTTACCACAAATACAACAAATAAAACTCAAGAACAACGCATTCAATGGGACATTAGATATGGGGAACAAAATTAGCCAACAGTTGCAGCTCGTTGATTTGCAAAGTAACAATATTTCCCAATTTACCTTTGGTTCAGGATATTCCAAAATTTTGATGCTGATAGGGAATCCTGTGTGTATCACTGATAGTACCCTCTCAAATACGGACTATTGCCAGCTTCAAAATCATCCGGTGAAACCCTATTCTACCAGCCTTTTGACGTGTGGAAATAAGTTGTGTCCTCCTGACGAGGAGTTAAACCCTCAGAGTTGTGAATGTGCCTATCCATTTGAAGGGACTTTATACTTCAGAGCACCCTCGTTCAGGGGATTGTCCAATGCAACTTTGTTTAACTCATTGGAACGGACTCTTTGGGAAAAACTAAAGCTTACGCCTGGTTCAGTTTCTCTTCAAAACCTTTTCTTTAATGTTGACGATTATCTTCAGATGCAGCTTGCACTTTTTCCACCCAATGGAAAGTATTTTAATAGGTCAGAGATTCAGAGGATTGGGTTTGACTTGAGTAATCAAACTTACAAACCTCCCCCAGAATTTGGGCCATATTATTTCATTGCATCTCCCTATGGTTTTTCAGACACGGCTAGGGGAAGTTCAATCAGCCATGGAGTGATAATTGGGGTAGCTATTGGTTGTGCCTTTCTCGTTCTAGGCCTCGTTGGAGTCGGAATATATGCGATTCGGCAAAAGAAACGTGCAGAAAAGGCCATTGGATTGAGTCGTCCATTTGCTTCTTGGGCTCCAAGTGGAAATGATAGTGGAGGTGCACCACAATTGAAGGGAGCCAGATGGTTTTCTTATGATGAGCTTAAAAAAAGCACAAATAATTTCTCCATGAGCAATGAAATAGGATCTGGAGGATATGGCAAGGTATACAGAGGACTGCTTGTGGATGGACTAGTAGTTGCGATCAAAAGAGCTCAACAAGGATCAATGCAGGGTGGCCTTGAGTTCAAGACGGAAATCGAACTGCTTTCACGAGTTCATCACAAGAACCTTCTTGGCCTCGTGGGATTTTGTTTTGAACAAGGAGAACAGATGCTTGTTTATGAATTTATGCCTAATGGAACACTTAGAGATAGCCTATCTGGAAAATCTGGTATCAATCTTGATTGGAAGAGAAGACTTCGCATTGCACTTGGGTCTGCCAGAGGATTGACTTACTTACATGAACTTGCTAATCCTCCCATAATCCATAGAGACATTAAGTCCACCAACATTCTGTTGGATGAACATTTAAATGCAAAAGTTGCAGACTTTGGTTTGTCAAAGCTTGTCTCAGACAGTGAAAAGGGACATGTTTCTACTCAAGTTAAAGGAACACTGGGCTATTTGGATCCTGAATATTACATGACTCAACAATTGACTGAGAAAAGTGATGTATATAGCTTTGGAGTAGTCATGCTTGAACTGCTCACTGCTAAGCTGCCTATTGAAAAAGGAAAGTATGTAGTTCGTGAGGTGCGTATGCTGATGAACAAAAATGAAGAAGAATATTACGGTCTGAAGCAGATAATGGATGCAAACATAGTAAACAACAATACAACGACTATTATTGGGCTTGGAAGGTTCTTGGAGTTGGCAATGCAATGCGTTGAAGAATCAGCTGAAGAGCGTCCCACGATGAGTGAAGTGGTGAAGATAATTGAGAGTATTTTGCAGAGTGATGGAATAAACACGAACACGACATCGGCATCCTCGTCTGCAACCGAGTTTGGGACTTCCAAAACTGCTCCTAGGCATCCTTATAATGATCCTATAACAAAAAAGGACACTAATGACAGTAATGCTTTTGATTACAGTGGTGGATACACTCTTTCAACAAAAGTGGAGCCCAAATAG 2913 41.57 MLLSSALQTLLLLAFVYAGIDIAASFTDPRDYVALESLRNEWQNTPPSWGTSNDPCGTPWEGVTCNNSRVTALRLSTMGLKGQLGGDIGGLTELISLDLSFNKDLTGSISPALGDLQNLNILILAGCGFSGKIPEELGNLSQLSFLALNSNNFTDTIPPSLGKLSHLYWLDLADNQLTGSLPVSTSQSPGLDLLLKAKHFHFNKNQLSGSIPPKLFSSEMVLIHILFDGNKLSGSIPPTLGLVKTLEVLRLDRNSLTGPVPSNLNNLTKVNELNLANNKLTGPIPNLTEMNSLNYVDLSNNSFDSSAAPEWFSNLPLLTTLVFEHGSIQGSVPEGVFSLPQIQQIKLKNNAFNGTLDMGNKISQQLQLVDLQSNNISQFTFGSGYSKILMLIGNPVCITDSTLSNTDYCQLQNHPVKPYSTSLLTCGNKLCPPDEELNPQSCECAYPFEGTLYFRAPSFRGLSNATLFNSLERTLWEKLKLTPGSVSLQNLFFNVDDYLQMQLALFPPNGKYFNRSEIQRIGFDLSNQTYKPPPEFGPYYFIASPYGFSDTARGSSISHGVIIGVAIGCAFLVLGLVGVGIYAIRQKKRAEKAIGLSRPFASWAPSGNDSGGAPQLKGARWFSYDELKKSTNNFSMSNEIGSGGYGKVYRGLLVDGLVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLLGLVGFCFEQGEQMLVYEFMPNGTLRDSLSGKSGINLDWKRRLRIALGSARGLTYLHELANPPIIHRDIKSTNILLDEHLNAKVADFGLSKLVSDSEKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELLTAKLPIEKGKYVVREVRMLMNKNEEEYYGLKQIMDANIVNNNTTTIIGLGRFLELAMQCVEESAEERPTMSEVVKIIESILQSDGINTNTTSASSSATEFGTSKTAPRHPYNDPITKKDTNDSNAFDYSGGYTLSTKVEPK 970
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 74060821 74069064 + Tan0021763.1 Tan08g2259 762151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2259 970 Gene3D Phosphorylase Kinase; domain 1 608 709 - -
Tan08g2259 970 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 710 922 - -
Tan08g2259 970 Pfam Protein tyrosine and serine/threonine kinase 635 904 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2259 970 SUPERFAMILY Protein kinase-like (PK-like) 619 920 IPR011009 -
Tan08g2259 970 SUPERFAMILY L domain-like 289 403 - -
Tan08g2259 970 CDD STKc_IRAK 640 909 - -
Tan08g2259 970 ProSitePatterns Protein kinases ATP-binding region signature. 640 662 IPR017441 GO:0005524(InterPro)
Tan08g2259 970 MobiDBLite consensus disorder prediction 916 970 - -
Tan08g2259 970 PANTHER RECEPTOR-LIKE PROTEIN 55 47 907 - -
Tan08g2259 970 Gene3D Transferase(Phosphotransferase) domain 1 710 931 - -
Tan08g2259 970 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Tan08g2259 970 MobiDBLite consensus disorder prediction 916 934 - -
Tan08g2259 970 FunFam Leucine-rich repeat family protein 30 186 - -
Tan08g2259 970 SUPERFAMILY L domain-like 38 303 - -
Tan08g2259 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 754 766 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2259 970 ProSiteProfiles Protein kinase domain profile. 634 910 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2259 970 SMART serkin_6 634 910 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2259 970 Gene3D Ribonuclease Inhibitor 190 412 IPR032675 -
Tan08g2259 970 Gene3D Ribonuclease Inhibitor 31 189 IPR032675 -
Tan08g2259 970 Pfam Leucine Rich Repeat 246 267 IPR001611 GO:0005515(InterPro)
Tan08g2259 970 Pfam Leucine Rich Repeat 118 140 IPR001611 GO:0005515(InterPro)
Tan08g2259 970 Pfam Leucine Rich Repeat 292 315 IPR001611 GO:0005515(InterPro)
Tan08g2259 970 Pfam Leucine Rich Repeat 143 164 IPR001611 GO:0005515(InterPro)
Tan08g2259 970 FunFam Leucine-rich repeat protein kinase family protein 603 709 - -
Tan08g2259 970 MobiDBLite consensus disorder prediction 946 960 - -
Tan08g2259 970 FunFam Predicted protein 189 432 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g2259 Tan-Chr8:74060821 Tan10g1504 Tan-Chr10:23066185 0.00E+00 dispersed
Tan08g2259 Tan-Chr8:74060821 Tan03g0690 Tan-Chr3:62368830 1.80E-96 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67999 PF07714 PK_Tyr_Ser-Thr 5.10E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2259 - - - 0.0