Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2269 ATGTCGTCGCAGCATTCGGATTTGGATTCTTCAGCTTTTGATACTCAAACTTCGTCTAATCCGATTCCCACGGATGCTACTCCGGCTCCCTTGGATCCCCCTTCCGCCTCCTCCACCATCTCTGAATCTGAAGAAAATCCCTGCACATCTTCTTCACCTTCCTCCATTCCACCTCCGATTCACTTACCTCTCTCTTGGCCTACTGACGCCACCCTTTCCCTCCAATGGATTCACCATCTCATCGCCGCCTTCGACTGGTCTTCCAAAAACTTACCTCCATCCGAATTTCCTTCCGTCCTTCCCGTCTCCGTTTTCGATTCCCTAATCCTCACTGCTTCTAAAATCCTCCACAAAGAACCCAATTGCCTCAGAATCCTCGAAGACTCAGTCACCAGCAGCGACTCCACTGTAGTCGTCGTCGGAGACATCCACGGTCAGTTTCATGATCTCCTCTTTCTCCTTCAGGATGCTGGGTTTCCATCTGAAAATCGTTTCTTTGTCTTCAATGGGGATTACGTCGACAGAGGGGCTTGGGGTCTTGAAACATTTTTGCTCTTATTGGCTTGGAAGGTGTTCATGCCACATCGAGTATTTCTTCTTCGTGGAAACCACGAGTCCAAGTACTGCACATCCGTTTATGGTTTTGAGAAGGAAGTGCTAACCAAGTACGGAGACAAAGGTAAGCATGTCTATCGGAAGTGTTTGGGATGTTTCGAAGGGCTGCCTTTGGCATCAATTATTGCTGGATGTGTATATACGGCTCATGGGGGACTTTTCCGCAGCGTATCGGTTCCTTCATCTAAAAGATCAAAAGGGAAAAAAAATCGTAGAATAAGCTTAAATCCCGAAGCCAACGGGTTGTCTCTTGGTTCTTTGGAGGAACTATCCAAAGCTAGAAGATCGGTTCTTGATCCCCCATGGGAAGGCTTGAATTTAATTCCTGGTGATGTGTTGTGGTCTGATCCCTCGATGAATCCTGGTCTTTCACCAAATAGAGAGAGAGGCATAGGTCTCTTGTGGGGTCCTGATTGCACTGAAGAATTCTTGAAAAAACTTGATCTGAAGTTAATTATCAGATCCCATGAAGGTCCTGATGCTAGAGAAAAAAGGCCCGGCCTTGCAGGAATGGATCAAGGGTACACAATAGATCATGTTGTAGATTCTGGGAAGCTGATTACTTTGTTTAGTGCTCCAGACTATCCACAATTTCAGGCTACTGAGGAGAGGTACAAAAACAAAGGTGCATATATTGTTCTAGAACCTCCGAATTTTGATGTTCCAATCATACATAGTTTTGAAGCCATTACTCCGCGACCGAAGGTCAATGCATATTATGACTTTGAAGATGTAATTGATTCTGACGAAGAATTAGATTTGGCAACAATGGCAACCGATGATCCATGA 1404 45.37 MSSQHSDLDSSAFDTQTSSNPIPTDATPAPLDPPSASSTISESEENPCTSSSPSSIPPPIHLPLSWPTDATLSLQWIHHLIAAFDWSSKNLPPSEFPSVLPVSVFDSLILTASKILHKEPNCLRILEDSVTSSDSTVVVVGDIHGQFHDLLFLLQDAGFPSENRFFVFNGDYVDRGAWGLETFLLLLAWKVFMPHRVFLLRGNHESKYCTSVYGFEKEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVSVPSSKRSKGKKNRRISLNPEANGLSLGSLEELSKARRSVLDPPWEGLNLIPGDVLWSDPSMNPGLSPNRERGIGLLWGPDCTEEFLKKLDLKLIIRSHEGPDAREKRPGLAGMDQGYTIDHVVDSGKLITLFSAPDYPQFQATEERYKNKGAYIVLEPPNFDVPIIHSFEAITPRPKVNAYYDFEDVIDSDEELDLATMATDDP 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 74164590 74175383 - Tan0002160.1 Tan08g2269 762161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2269 467 PRINTS Serine/threonine phosphatase family signature 296 323 IPR006186 GO:0016787(InterPro)
Tan08g2269 467 PRINTS Serine/threonine phosphatase family signature 390 406 IPR006186 GO:0016787(InterPro)
Tan08g2269 467 PRINTS Serine/threonine phosphatase family signature 136 163 IPR006186 GO:0016787(InterPro)
Tan08g2269 467 PRINTS Serine/threonine phosphatase family signature 199 223 IPR006186 GO:0016787(InterPro)
Tan08g2269 467 PRINTS Serine/threonine phosphatase family signature 166 193 IPR006186 GO:0016787(InterPro)
Tan08g2269 467 PRINTS Serine/threonine phosphatase family signature 236 262 IPR006186 GO:0016787(InterPro)
Tan08g2269 467 Gene3D - 96 459 IPR029052 -
Tan08g2269 467 FunFam Serine/threonine-protein phosphatase 84 460 - -
Tan08g2269 467 ProSitePatterns Serine/threonine specific protein phosphatases signature. 200 205 IPR006186 GO:0016787(InterPro)
Tan08g2269 467 CDD MPP_PP7 66 446 IPR041754 -
Tan08g2269 467 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 48 458 IPR051134 -
Tan08g2269 467 Pfam Calcineurin-like phosphoesterase 136 362 IPR004843 GO:0016787(InterPro)
Tan08g2269 467 SMART pp2a_7 100 436 IPR006186 GO:0016787(InterPro)
Tan08g2269 467 MobiDBLite consensus disorder prediction 1 51 - -
Tan08g2269 467 SUPERFAMILY Metallo-dependent phosphatases 95 437 IPR029052 -
Tan08g2269 467 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g2269 Tan-Chr8:74164590 Tan11g0739 Tan-Chr11:6304711 6.00E-114 dispersed
Tan08g2269 Tan-Chr8:74164590 Tan05g0643 Tan-Chr5:4788390 7.50E-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2269 K04460 - csv:116402510 805.053