Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan08g2334 | ATGGCCAACGACGTCGTTTTTCTATTCGCTCCTTTTTTTCTCACTCTCATTTTTACTTATTTGATTTGGTTTCATTTCCTCGCCCGGAAGCTGACCGGTCCAAGAGTCTGGCCGGTCATCGGCAGCCTACCGGCTCTCATCTCGAACCGGCATAGACTCCACGACTGGATGGCCGGAAACCTCCGCTCTACAGGCGGCGCCGCCACATACCAAACCTGCACGGTGGCGGTTCCATTCCTCGCTAGAAAACAAGGGTTCTACACGGTCACGTGCCACCCGAGAAACATCGAGCACGTGCTCCGAACCCGGTTCGAGAATTACCCGAAAGGACCGGACTGGCAAGCGGCTTTTCACGATCTATTGGGGCAGGGGATTTTCAACAGCGACGGCGAGATTTGGCTGATTCAGCGGAAGACGGCGGCGCTGGAGTTCACGACGAGAACGCTCCGGCAGGCGATGGATCGGTGGGTGAATCGGACGATAAGGACGCGACTTTGGTGCATTTTGGACAAGGCGGCGGAGTATAAAACGGCGGTGGATTTGCAGGATTTGTTGCTCCGATTGACATTCGATAATATTTGTGGGCTGACTTTTGGGAAAGATCCTCAAACTTTGTCGCCGGAATTGCCTGCAAATCCCTTCGCTCTGGCGTTTGACACCGCCACTGAAGCCACTCTCCAGCGCCTTCTTTACCCTGGTCTTTTATGGAGGCTGGAGAAGCTTCTGGGCATCGGAATGGAAAGAAGGTTAAAGAAGAGTTTAAAAGTAGTAGAAGAATACATAAACGACGCCGTTGCAGCTCGTAAAGAATCTCCCTCGGACGACTTATTATCCCGCTTCATGAAGAAGAAGCACGACGGCGACGGCGACGGCGACGGAAGCCGCTTCTCCGCCGCCGTGCTCCACCGCATCGCCTTAAACTTCGTCCTCGCCGGCCGTGACACGTCCTCCGTGGCACTCACGTGGTTCTTTTGGCTCGTAATGAACCACCCGCACGTGGAGGCCAAAATCCTCGCCGAAATCTCAACGGTCCTCCGCCAGACACGTGGCGAGGATCCACGGCGGTGGATCGAAGAGCCGTTGGTGTTCGACGAGGCCGACAAAATGGTGTATTTAAAAGCCGCGTTGGCCGAAACGCTGCGTTTATACCCGTCCGTACCGGAGGATTTCAAATACGTCGTGGCTGATGACGTGTTGCCAGATGGCACTTTCGTGCCGGCCGGTTCGACCGTGACGTATTCGATTTATTCGGTCGGGAGGATGAAGAGCATTTGGGGAGAGGATTGTGGGGAGTTTAAACCGGACCGGTGGCTCTCTTCGGCCGGAGACCGGTTCGAGGGGCCGAAGGATGGATATAAATTTGTGGCGTTTAATGCTGGACCGAGGACTTGTTTGGGGAAGGATTTGGCTTACTTGCAGATGAAATCCGTCGCCTCCGCCGTGCTCCTCCGGTACCGGCTGGCGCCGGTTCCCGGTCACCGAGTGGAACAGAAAATGTCTCTTACTCTTTTTATGAAGAATGGGCTTCGGGTTTATTTACATCCTCGCCGGCTCCGCTAG | 1560 | 54.81 | MANDVVFLFAPFFLTLIFTYLIWFHFLARKLTGPRVWPVIGSLPALISNRHRLHDWMAGNLRSTGGAATYQTCTVAVPFLARKQGFYTVTCHPRNIEHVLRTRFENYPKGPDWQAAFHDLLGQGIFNSDGEIWLIQRKTAALEFTTRTLRQAMDRWVNRTIRTRLWCILDKAAEYKTAVDLQDLLLRLTFDNICGLTFGKDPQTLSPELPANPFALAFDTATEATLQRLLYPGLLWRLEKLLGIGMERRLKKSLKVVEEYINDAVAARKESPSDDLLSRFMKKKHDGDGDGDGSRFSAAVLHRIALNFVLAGRDTSSVALTWFFWLVMNHPHVEAKILAEISTVLRQTRGEDPRRWIEEPLVFDEADKMVYLKAALAETLRLYPSVPEDFKYVVADDVLPDGTFVPAGSTVTYSIYSVGRMKSIWGEDCGEFKPDRWLSSAGDRFEGPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLAPVPGHRVEQKMSLTLFMKNGLRVYLHPRRLR | 519 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 74643695 | 74647705 | + | Tan0019194.1 | Tan08g2334 | 762226 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan08g2334 | 519 | PANTHER | CYTOCHROME P450 | 21 | 509 | - | - | |
| Tan08g2334 | 519 | CDD | CYP86A | 73 | 509 | - | - | |
| Tan08g2334 | 519 | SUPERFAMILY | Cytochrome P450 | 23 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g2334 | 519 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 457 | 466 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan08g2334 | 519 | PRINTS | P450 superfamily signature | 455 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g2334 | 519 | PRINTS | P450 superfamily signature | 464 | 475 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g2334 | 519 | PRINTS | P450 superfamily signature | 374 | 385 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g2334 | 519 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g2334 | 519 | FunFam | Cytochrome P450 | 25 | 519 | - | - | |
| Tan08g2334 | 519 | Pfam | Cytochrome P450 | 87 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g2334 | 519 | Gene3D | Cytochrome P450 | 27 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g2334 | 519 | PRINTS | E-class P450 group I signature | 454 | 464 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g2334 | 519 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g2334 | 519 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g2334 | 519 | PRINTS | E-class P450 group I signature | 464 | 487 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan08g2334 | 519 | PRINTS | E-class P450 group I signature | 373 | 391 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan06g2027 | Tan-Chr6:65700183 | Tan08g2334 | Tan-Chr8:74643695 | 4.20E-191 | dispersed | |
| Tan08g1741 | Tan-Chr8:69185725 | Tan08g2334 | Tan-Chr8:74643695 | 2.90E-82 | dispersed | |
| Tan08g2334 | Tan-Chr8:74643695 | Tan09g2367 | Tan-Chr9:73398559 | 2.80E-88 | dispersed | |
| Tan08g2334 | Tan-Chr8:74643695 | Tan07g1627 | Tan-Chr7:67732911 | 1.80E-196 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan08g2334 | K15401 | - | csv:101214516 | 964.911 |