Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2366 ATGGCGAAAACGACCACGCCTTCGTGGACAAGAACTAACTGTGTCATCGGAAAGGGCTCCTTCGGAACAGTCAGTGTCGGAATCAGAAAATCGGACGGTCGGATCTTCGCGGTGAAGTCTGTGGAACAGAGTGTTGAATTCCGGCGGCAAATTGAGTGTTTAGAGAATGAAATTCGGGTTCTCCGATCCTTGAATTCGCCGTACGTGGTGGGGTTTCTCGGAGACGACGTTTCCGGGGTGTCTACGACGACGTCGTTTCGGAATCTGCACATGGAGTATTTGCCAGGTGGCACCGTCGCCGATGACCCAATTGTCGCCGGCGACGAGAAGGTTTTACGGGCGAGGACACGGTGTATTGTTTCGGCTCTGAGTTATATTCATTCGAAAGGAATTGTCCATTGTGATGTTAAAGGGGGGAATATTTTGATCGGATTGGATCCGAGTTTTGTGAAATTGGCCGATTTCGGCTCTGCACTTAGTGCCGGCGACACGTGTCAAGGACGGGTGGCGCCACGTGGGAGTCCGCTATGGATGGCGCCGGAGGTGGTTCGAGGGGAATACCAGGGGCCGGAATCGGATGTTTGGTCCGTCGGGTGTACGGTCATAGAAATGGTCACCGGGAAACCGGCGTGGGAAGATTTCGGGGCCGATACGCTGAGTCGAATCGGATTTTCCGACAAGGTTCCGGAGTTTCCGACGAGGTTGTCGGAACTCGGACGGGATTTTCTCCGGAAGTGTCTCAGAAGAGATCCGAGTGAGCGGTGGAGCTGTGATCGTCTGCTGCAGCATCCATTTCTGGCGGCGGCGGCGGCCTTGCCGGATTTCTCCGACGATAATTCCCCCCGGTGCGTGCTCGATTGGGTCAACGTCAATTTTGAGGACGACGAAGATGATGAAATCCCATTCTCCGGCGCAACCTCCGGTGACGGAGGCTGGGAAAGTGAGATCTCAGGCAACGGCAGAATTGGGAAATTGAGTACGAGTGAATGGCCGAATTGGGAATCGGATGGTTGGTCGTCGGTGAGAAGGTTCTGCAGTGAAGCGGCAGCGGCGCCGGCAAGCTGTGAAGAAGAAGAAGGGGTGGGGGTAGAATCGGAATATGGGAGTTTGAGAGGGGTAGAAGGGGTAATGGAGGGGACAAGTTCGGAATATTCGGAGTTTGTAAAGGACAGCCACGGAAAATTGGGAGGTGAATATTCAAATCCTGACGGTCTGGAAATTCCGGAGCGGCCACGTAATAATTGCGGCGGCGGCGGCAGAAGCGGCTGTGGCGGTGGCGGTGACGGTGGATTAAATTTCCGACGGTGGGGGTCTGAAAGATGTGAAATTATAACGATAACCTCGTGGATATATTCAATAGAATTGATATTATGTTATTATTGGAAAATATTAATGAAGCAATTGGTGTTATTTGGGAATTATAATTTATTACCTTTCTTTTGTGCCTAA 1449 52.04 MAKTTTPSWTRTNCVIGKGSFGTVSVGIRKSDGRIFAVKSVEQSVEFRRQIECLENEIRVLRSLNSPYVVGFLGDDVSGVSTTTSFRNLHMEYLPGGTVADDPIVAGDEKVLRARTRCIVSALSYIHSKGIVHCDVKGGNILIGLDPSFVKLADFGSALSAGDTCQGRVAPRGSPLWMAPEVVRGEYQGPESDVWSVGCTVIEMVTGKPAWEDFGADTLSRIGFSDKVPEFPTRLSELGRDFLRKCLRRDPSERWSCDRLLQHPFLAAAAALPDFSDDNSPRCVLDWVNVNFEDDEDDEIPFSGATSGDGGWESEISGNGRIGKLSTSEWPNWESDGWSSVRRFCSEAAAAPASCEEEEGVGVESEYGSLRGVEGVMEGTSSEYSEFVKDSHGKLGGEYSNPDGLEIPERPRNNCGGGGRSGCGGGGDGGLNFRRWGSERCEIITITSWIYSIELILCYYWKILMKQLVLFGNYNLLPFFCA 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 75028267 75029855 + Tan0007830.1 Tan08g2366 762258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2366 482 MobiDBLite consensus disorder prediction 296 329 - -
Tan08g2366 482 Coils Coil 44 64 - -
Tan08g2366 482 Gene3D Transferase(Phosphotransferase) domain 1 8 294 - -
Tan08g2366 482 SUPERFAMILY Protein kinase-like (PK-like) 14 280 IPR011009 -
Tan08g2366 482 ProSiteProfiles Protein kinase domain profile. 10 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2366 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2366 482 CDD STKc_MAPKKK 8 265 - -
Tan08g2366 482 Pfam Protein kinase domain 15 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2366 482 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524(InterPro)
Tan08g2366 482 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 267 IPR052751 GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Tan08g2366 482 SMART serkin_6 10 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2290 Tan-Chr3:77105204 Tan08g2366 Tan-Chr8:75028267 2.50E-56 dispersed
Tan08g2366 Tan-Chr8:75028267 Tan11g1341 Tan-Chr11:11645114 1.60E-29 dispersed
Tan08g2366 Tan-Chr8:75028267 Tan05g0893 Tan-Chr5:7131630 5.90E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68003 PF00069 Pkinase 9.60E-53 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2366 - - - 0.0