Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2370 ATGAACAACCCATCAGAGGAAAATGTTGAAACAGAAGGCATTTCTTCAAAGAATGCGAAGAATGAGTCCTACAGAAGTGTGCTTATATTGGCTTACCAAAGTCTAGGAGTTGTTTATGGCGACCTCAGCACCTCCCCTCTATATGTTTACAAAACTACTTTCTCTGGGAAATTGAGCCTCCATGAGAATGATGAAGAAATTTATGGGGTTCTATCATTCATCTTCTGGACATTTACACTCATTGCTCTCTTCAAATACGTTTTAATTGTCATGTCAGCCGACGATAATGGTGAAGGGGGTACCTTTGCACTGTACTCTCTTCTCTGCAGGCATGCTAGATTATGCATTCTACCGAATCAAGAGCCTGTTGATGAAAAGTTATCTGCGTATGACATGAAGGGAATCTCGGAGACAAGACCAAGTGCTGCTCTAAAGTCTTTTTTTCAGCTGCATCCGTCTTTTCGAAAAGGTTTTTTGGTGTTTGTGCTCTTTGGAACCTCCATGGCTATTGGTGATGGAGTACTCACTCCTGCAATATCAGTTCTTTCAGCAGTCTCAGGAGTCAAACATAAGATCACTGGACTCCATGAGAATTATGTGGTATTAATCTCGTGCGTCATCTTAGTTGGACTGTTCTCCCTTCAGCATCGTGGAACACACAAAGTTGCTTTCATGTTTGCTCCAATCATCACGGCATGGCTTGTCTGTATCAGCGTTATCGGAATGTATAATATTATCAAGTGGAATCCACATATATATCACGCACTCTCTCCAGTTTATATGCTGAAGTTCCTTAGAAGCACAGGCATCGAAGGTTGGGTTTCATTAGGCGGAGTTGTTCTCTCAATAACAGGTGTGGAGGCAATGTTTGCTGATTTAGGCCATTTCTCTTCGCTTTCGATCAAGATTGCCTTCACATTTCTTGTCTATCCTTCTTTGATTCTTGCTTATCTGGGTGAGGCTGCATTCCTCTCCAAGCACCATGAAGATATTCAGAGAAGCTTCTACAAAGCAATACCTGAAGCGGTGTTTTGGCCGGTGTTCATCGTGGCCACTTTTGCTACTGTTGTAGGAAGTCAGGCCGTGATTTCAGCTACATTCTCCCTCGTAAACCAGTGCTGTGCTCTGAATTGCTTCCCCCATGTGAAAACTATGCACACTTCAAACCAGATATATGGGCAGATTTATATCCCAGAAGTTAATTGGATGCTAATGTGCCTTTGTTTAGCTGTGACAATTGGCTTGAGAGATACAAACATGATAGGCCATGCATATGGGCTGGCTGTCACCATTGTTATGTTTGTCTCAACTTGCTTGATGGCACTTGTGATAATAATTGTTTGGAAGCAGAGGTTGGTCAACGCCATAGCATTTTTCATGTTTTTCGGGTTGATCGAACTACTTTACATCTCGGCATCAATAAGCAAAGTTCACGAAGGTGGATGGATCCCCATCGTGCTTTCTATGCTCTTTATGTGTTCAATGTATACGTGGTACTATGGGACAATGAAGAAACACGAATACGATGACGAGAACAAAGTGTCGATGAATCGGATACTTTCTTCAGGGCCTAGCCTCGGCATAGTACGGGTGCCAGGAATTGGACTCATATACACTAATCTGGCCTCTGGTGTGCCTGCTGTTTTTGGTCACTTTGTAACTACTTTGCCTGCATTTCATCAAGTGCTGGTTTTTGTTTGTATAAAGTATGTTCAAGTTCCCCATGTCGAGGAAGAAGATCGTTTGCACATTACAAGGGTGGGGCCAAAAGAATGCAACATGTTTCGGTGCATCGTGAGGTACGGATATCGGGATTTGCTACAAGAAAACTACAATTTCGAGAATCGATTGGTGTTTTCTCTAGTGCATTATGTAGAAACAGAAGATCAGTTTTGGGAACCAATGACACAAGTCTCTAGAGGGTGTGAAAATTCAGAAGAAGAATCTTGTGAATATGAACCAATGGAGCAGGCTTTTACAAGCTCAAATGTTTTGCAGTCTTCCTACAAATATCAAGCAACGGATACCGCAGACGACGATCGGGAGAAGTCTATACATAGTGAGGAAGCGATGCAGATATCGAGAGCGAAAGAATCAGGAATCACTTACATTTTCGGACATTGCTCGGTCAAGGCCAAGAAATCATCCTCCATTTTAAAGAAGTTGGTCATTGATATTGTGTATGCTTTTTTGAACCAGAATTGCAGAGAGCCTGAGGCTATACTGAATGTGCCTCACACTTCTCTCTTGGAAGTTGGAATGGTATATTATGTATAG 2277 42.2 MNNPSEENVETEGISSKNAKNESYRSVLILAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLHENDEEIYGVLSFIFWTFTLIALFKYVLIVMSADDNGEGGTFALYSLLCRHARLCILPNQEPVDEKLSAYDMKGISETRPSAALKSFFQLHPSFRKGFLVFVLFGTSMAIGDGVLTPAISVLSAVSGVKHKITGLHENYVVLISCVILVGLFSLQHRGTHKVAFMFAPIITAWLVCISVIGMYNIIKWNPHIYHALSPVYMLKFLRSTGIEGWVSLGGVVLSITGVEAMFADLGHFSSLSIKIAFTFLVYPSLILAYLGEAAFLSKHHEDIQRSFYKAIPEAVFWPVFIVATFATVVGSQAVISATFSLVNQCCALNCFPHVKTMHTSNQIYGQIYIPEVNWMLMCLCLAVTIGLRDTNMIGHAYGLAVTIVMFVSTCLMALVIIIVWKQRLVNAIAFFMFFGLIELLYISASISKVHEGGWIPIVLSMLFMCSMYTWYYGTMKKHEYDDENKVSMNRILSSGPSLGIVRVPGIGLIYTNLASGVPAVFGHFVTTLPAFHQVLVFVCIKYVQVPHVEEEDRLHITRVGPKECNMFRCIVRYGYRDLLQENYNFENRLVFSLVHYVETEDQFWEPMTQVSRGCENSEEESCEYEPMEQAFTSSNVLQSSYKYQATDTADDDREKSIHSEEAMQISRAKESGITYIFGHCSVKAKKSSSILKKLVIDIVYAFLNQNCREPEAILNVPHTSLLEVGMVYYV 758
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 75053506 75058104 + Tan0008568.1 Tan08g2370 762262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2370 758 Pfam K+ potassium transporter integral membrane domain 30 521 IPR053951 -
Tan08g2370 758 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 17 758 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan08g2370 758 Pfam K+ potassium transporter C-terminal domain 532 756 IPR053952 -
Tan08g2370 758 NCBIfam potassium uptake protein 30 758 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g2370 Tan-Chr8:75053506 Tan11g0608 Tan-Chr11:5393187 1.30E-222 dispersed
Tan08g2369 Tan-Chr8:75050395 Tan08g2370 Tan-Chr8:75053506 0.00E+00 tandem
Tan08g2370 Tan-Chr8:75053506 Tan08g2371 Tan-Chr8:75055197 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2370 K03549 - csv:101222845 1360.9