Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2389 ATGGCTTCCAATTCTGGAGATGGATCTTCACACGATCCCGCGAGCTCGAGCGAATCAGAGAAGCCGCCAATCGAGCCCATAAGGATGCCTACAGTCGAAGAGATTCGCGGCCAAGATATTTGGAACAACTGTGCAGTTCGCAGTGTTGTTAGTGGAGTCATGGGCGGTGGTCTTGGATTGTTCATGGGTTTATTTTTGGGGGCATTGGATAATCCATTGATGCAAGACGAGATGACTGCTAGACAGCAATTTGTTTATACTGCAAAACAGATGGGACGGCGTAGTTGGGGTTCTGCAAAAGCGTTTGCAGTCATGGGCTTTGTTTTCTCAGCAGCAGAATGTGTTGTAGAAAAGGCTCGAGCCAAACATGATACAACTAATACAGTAGTCGCTGGTTGTGTAACTGGTGGTGCAATATCAGCTAAAGAGGATGACAAAGAAACGAAGCATTTGGAAGATTTAGAAGGAGCCGATGCTCGTCTTCATCTATTCCAAATCGATCTCCTCGATTATGACTCCATTGTCCCCGCCGTCACTGGTTGCGCCGGCGTCTTCCACCTTGCGTCTCCCTGCATCGTTGATCCTGTAGAAAATCCTGAGAGGGATTTGTTGGATCCAGCTATCAAAGGAACCATCAACGTCCTGACGGCGGCTAAGGAGGCTGGGGTACAACGCGTGGTGGTAACTTCTTCTATCTCCGCCATGATTCCGAATCCTAACTGGCCGGCGAATGTTGTAATCAATGAAGAATGCTGGGCCGATATTGATTACTGCAAGCAAAAGGGGCTGTGGTATTCGGTTTCAAAAACTCTAGCAGAAAAGGCTGCTTGGGATCTTGCCAAGGAGAAAGGATTGGATGTGGTGGTGATTAACCCAGGCACAGTGATGGGCCCTGTGTTTCCTCCCAGAATTAATGCAAGCATGCACATGCTTTTAGAACTTCTCGAGGGGTGCAGTGAGACATTCGCGGATGTCTTTATCGGAGTAGTGCACTTTAAAGATGTTGCATTAGCACACATTTTGGTCTATGAAAACAAATCAGCTACTGGAAGGCACTTTTGTGCTGAGGCCATATCTCGTTACTCTGACTATGTCGCAAAGGTTGCTGAACTCTTCCCTCAATATAAGGTGCCCAGGTCGATAGAAGATACACAGCCTGATTTGGTGAGAGCAAAAGATGGAGCTAAGAAGTTGATGAACATGGGGCTGGAGTTCATCCCAATAGAAGAAATCCTCAAGGAGGCTGTTGAGGATCTGAAGAAGAAGGGATATATTTCCTGA 1281 47.07 MASNSGDGSSHDPASSSESEKPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTARQQFVYTAKQMGRRSWGSAKAFAVMGFVFSAAECVVEKARAKHDTTNTVVAGCVTGGAISAKEDDKETKHLEDLEGADARLHLFQIDLLDYDSIVPAVTGCAGVFHLASPCIVDPVENPERDLLDPAIKGTINVLTAAKEAGVQRVVVTSSISAMIPNPNWPANVVINEECWADIDYCKQKGLWYSVSKTLAEKAAWDLAKEKGLDVVVINPGTVMGPVFPPRINASMHMLLELLEGCSETFADVFIGVVHFKDVALAHILVYENKSATGRHFCAEAISRYSDYVAKVAELFPQYKVPRSIEDTQPDLVRAKDGAKKLMNMGLEFIPIEEILKEAVEDLKKKGYIS 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 75228485 75241525 - Tan0014567.1 Tan08g2389 762281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2389 426 Pfam NAD dependent epimerase/dehydratase family 148 351 IPR001509 -
Tan08g2389 426 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 144 420 IPR036291 -
Tan08g2389 426 MobiDBLite consensus disorder prediction 1 26 - -
Tan08g2389 426 CDD FR_SDR_e 133 403 - -
Tan08g2389 426 MobiDBLite consensus disorder prediction 1 17 - -
Tan08g2389 426 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 114 417 IPR050425 GO:0016616(PANTHER)
Tan08g2389 426 FunFam Dihydroflavonol reductase 126 426 - -
Tan08g2389 426 Gene3D - 121 426 - -
Tan08g2389 426 Pfam Tim17/Tim22/Tim23/Pmp24 family 44 140 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g2389 Tan-Chr8:75228485 Tan08g2390 Tan-Chr8:75228979 8.90E-165 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2389 - - - 0.0