Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2390 ATGTCGACGATCGAGAAGAAGCCCGAACTGGTCTGCGTCACCGGCGCCAGTGGCTGTATCGGATCCTGGCTCGTTCACCTCCTCCTCCTCCGCGGCTACTCCGTTCACGCCACCGTCCAAAATCTCAAGGATGACAAAGAAACGAAGCATTTGGAAGATTTAGAAGGAGCCGATGCTCGTCTTCATCTATTCCAAATCGATCTCCTCGATTATGACTCCATTGTCCCCGCCGTCACTGGTTGCGCCGGCGTCTTCCACCTTGCGTCTCCCTGCATCGTTGATCCTGTAGAAAATCCTGAGAGGGATTTGTTGGATCCAGCTATCAAAGGAACCATCAACGTCCTGACGGCGGCTAAGGAGGCTGGGGTACAACGCGTGGTGGTAACTTCTTCTATCTCCGCCATGATTCCGAATCCTAACTGGCCGGCGAATGTTGTAATCAATGAAGAATGCTGGGCCGATATTGATTACTGCAAGCAAAAGGGGCTGTGGTATTCGGTTTCAAAAACTCTAGCAGAAAAGGCTGCTTGGGATCTTGCCAAGGAGAAAGGATTGGATGTGGTGGTGATTAACCCAGGCACAGTGATGGGCCCTGTGTTTCCTCCCAGAATTAATGCAAGCATGCACATGCTTTTAGAACTTCTCGAGGGGTGCAGTGAGACATTCGCGGATGTCTTTATCGGAGTAGTGCACTTTAAAGATGTTGCATTAGCACACATTTTGGTCTATGAAAACAAATCAGCTACTGGAAGGCACTTTTGTGCTGAGGCCATATCTCGTTACTCTGACTATGTCGCAAAGGTTGCTGAACTCTTCCCTCAATATAAGGTGCCCAGGTCGATAGAAGATACACAGCCTGATTTGGTGAGAGCAAAAGATGGAGCTAAGAAGTTGATGAACATGGGGCTGGAGTTCATCCCAATAGAAGAAATCCTCAAGGAGGCTGTTGAGGATCTGAAGAAGAAGGGATATATTTCCTGA 981 48.83 MSTIEKKPELVCVTGASGCIGSWLVHLLLLRGYSVHATVQNLKDDKETKHLEDLEGADARLHLFQIDLLDYDSIVPAVTGCAGVFHLASPCIVDPVENPERDLLDPAIKGTINVLTAAKEAGVQRVVVTSSISAMIPNPNWPANVVINEECWADIDYCKQKGLWYSVSKTLAEKAAWDLAKEKGLDVVVINPGTVMGPVFPPRINASMHMLLELLEGCSETFADVFIGVVHFKDVALAHILVYENKSATGRHFCAEAISRYSDYVAKVAELFPQYKVPRSIEDTQPDLVRAKDGAKKLMNMGLEFIPIEEILKEAVEDLKKKGYIS 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 75228979 75233487 - Tan0014567.2 Tan08g2390 762282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2390 326 Pfam NAD dependent epimerase/dehydratase family 11 252 IPR001509 -
Tan08g2390 326 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 317 IPR050425 GO:0016616(PANTHER)
Tan08g2390 326 Gene3D - 2 326 - -
Tan08g2390 326 FunFam Cinnamoyl-CoA reductase 1 4 326 - -
Tan08g2390 326 CDD FR_SDR_e 11 303 - -
Tan08g2390 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 320 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1490 Tan-Chr1:15138572 Tan08g2390 Tan-Chr8:75228979 2.60E-87 dispersed
Tan06g0468 Tan-Chr6:3411935 Tan08g2390 Tan-Chr8:75228979 1.00E-75 dispersed
Tan07g0758 Tan-Chr7:12217134 Tan08g2390 Tan-Chr8:75228979 5.50E-74 dispersed
Tan08g2389 Tan-Chr8:75228485 Tan08g2390 Tan-Chr8:75228979 8.90E-165 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2390 - - - 0.0