Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2409 ATGGTTGACAACGGTGAGGAGAAGCTTCTGGCCATGGCTCGCCACATAGCCAAGACTATGGGTCGCAACGAGTCCATGGCTGATGATATTCTTCAGATTTTTTCCAATTTCGATGCTAGGTTTTCCCTCGATAAACTGTCTGATAAAGCCGATGAGGTTGATCCCAGAAGCTCCGCCGCTTTGCAGCGTTCTCTCAAGTCTTTGGACCGCCGGATCTCTCAATATTTGGCCGCCGACCACCCGATTTGGGCGGATTCCGCCGATTCCTCTGCTTTTCTTGATGCTATCGATGAGTTGATGGCTACCATTAGAGACTGGACGCCGATGGCTAGGGATAAGACTGTTGGCACCTACCTTGCTCGCGCCGACGATCTGATGCAGCAGGCGATGTTCCGTGTAGATGAAGAGTTTCGGTCGTTGATGGAACGTGGAGGTGAGTCTTTTGAACTGACTCGCCATTTCAGGAACGGTGAGTCAACGGGCGATTTTTCCTTTGATTCTGAGGAAGATGAGGATGGTGCGGAAGGAATTCTTGGCGACGGCCTCCGGATCCCTGTGGCCCAGCCGGTGACGGACTACAACATCGTAATCGACGCGCTGCCGTCCGGGACTATCAGCGATCTCCATGAGATAGCGAAGCGCATGGTGGCGGCTGGGTTCGAGAAGGAGTGTTCTCACGCTTACAGTAGCTGCAGGAGGGAGTTCTTAGAGGAGAGTCTTTCTAGGTTGGGGTTACAGAAGCTGAGCATCGATGAAGTTCAAAAGATGCAATGGCAAGACATGGAAGAGGAGATTGAGCGCTGGATGAAAGCGATTACCGTCTCCCTTCGAATCCTCTTCCCAAGCGAACGACGGCTCTGCGAACGCGTATTCGTCGGCCTCTCCTCCGCCGCTGACCTCTCTTTCATGGAGGTCTGCCGAGGATCCACGATTCAGCTACTGAATTTTGCAGATGCGGTCGCAATTGGCTCGCGAGCACCGGAACGACTGTTCAAAATCCTCGATATGTTCGAGACCTTGAGAGACTTAATGCCAGAGTTCGATTCCGTATTTTCGGACCAGTACTGCTTGTTGCTTAGAAATGAAGCAATTACAATCTGGAAAAGGTTAGGCGGAACAATCAAGGGGATCTTCATGGAGCTTGAGAATTTGATCCGTCGTGATCCGGCTAAAACTCCGGTGCCGGGTGGCGGGCTTCATCCAATTACTCGATATGTGATGAATTACCTTAAAGCCGCCTGTAAATCGCGACAGACTCTGGAGCAAGTTTTCGAAGAAGCCGCTCTTCCCTCTCAGGATTACACCAAGCTCGAGGACAGAGCTGCAGCATCATCTTCGTTATCAGTTCAAATGGACTGGATCATGGAGCTTTTAGAGAGCAATTTAGAAGCAAAGTCGAAGATATACAAGGATCTTTCCTTAAGCTCTGTGTTTCTGATGAACAATGGCCGATACATTGTTCAGAAAGTGAAAGACAGTGAATTAGGATCAGTTTTAGGCGACAATTGGATTCGAAAGCACTCGGTTAAAAGCCGCCAATACCTCGGGAATTACCTGAAAAGCTCATGGAGCAAGGTGGTCGGAGTATTGAAAATGGACAGTGGCTCTTTAGCTCCGGCTGTAATGAAAGAGAAGCTCAAATCATTCAATGCGCAGTTCGAAGAAATCTGCCAATCGCAATCTACATGGGTGATATTCGAGCATCAGCTTAGAGAAGAAGCAAGAATCTCAGTTGCCAAAATCCTCCTGCCGGCATATCAAAATTTCATCGGAAGGTACCAGAGTTTGCCGGAGCTAGCAAAGCGTACAGACCGGTATTTGAAGTACACGGCGGAGGATGTGGAGGCTCAGATCACCGAGCTGTTCGAAGGCAGTGGCAGCGGCGGAAGGAGGTAA 1896 49.84 MVDNGEEKLLAMARHIAKTMGRNESMADDILQIFSNFDARFSLDKLSDKADEVDPRSSAALQRSLKSLDRRISQYLAADHPIWADSADSSAFLDAIDELMATIRDWTPMARDKTVGTYLARADDLMQQAMFRVDEEFRSLMERGGESFELTRHFRNGESTGDFSFDSEEDEDGAEGILGDGLRIPVAQPVTDYNIVIDALPSGTISDLHEIAKRMVAAGFEKECSHAYSSCRREFLEESLSRLGLQKLSIDEVQKMQWQDMEEEIERWMKAITVSLRILFPSERRLCERVFVGLSSAADLSFMEVCRGSTIQLLNFADAVAIGSRAPERLFKILDMFETLRDLMPEFDSVFSDQYCLLLRNEAITIWKRLGGTIKGIFMELENLIRRDPAKTPVPGGGLHPITRYVMNYLKAACKSRQTLEQVFEEAALPSQDYTKLEDRAAASSSLSVQMDWIMELLESNLEAKSKIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGDNWIRKHSVKSRQYLGNYLKSSWSKVVGVLKMDSGSLAPAVMKEKLKSFNAQFEEICQSQSTWVIFEHQLREEARISVAKILLPAYQNFIGRYQSLPELAKRTDRYLKYTAEDVEAQITELFEGSGSGGRR 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 75341689 75344180 + Tan0003371.1 Tan08g2409 762301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2409 631 PANTHER EXOCYST COMPLEX PROTEIN EXO70 63 625 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Tan08g2409 631 Pfam Exo70 exocyst complex subunit C-terminal 267 620 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Tan08g2409 631 Gene3D Exocyst complex component Exo70 82 630 - -
Tan08g2409 631 FunFam Exocyst subunit Exo70 family protein 76 629 - -
Tan08g2409 631 Pfam Exocyst complex component Exo70 N-terminal 86 142 - -
Tan08g2409 631 SUPERFAMILY Cullin repeat-like 83 623 IPR016159 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2361 Tan-Chr5:74963276 Tan08g2409 Tan-Chr8:75341689 7.30E-69 dispersed
Tan08g2409 Tan-Chr8:75341689 Tan09g2370 Tan-Chr9:73415933 1.40E-110 dispersed
Tan08g2409 Tan-Chr8:75341689 Tan05g2961 Tan-Chr5:81690153 4.80E-114 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2409 K07195 - csv:101204511 1124.0