Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2424 ATGGATTCAATATTGTGGTGGAAATTGTGGTGTGTTTTGGCGTTTGGTTGTTCATTGATAAGTGTGAGCTCTGGTAGTTTATCCGCAAACTATTACGAGAGCTCATGCCCGAAGCTACTCTCCACCGTTCGACGTGAGGTGGTGAAAGCAGTGAGCAAAGAGTATAGAATGGGAGCTTCGTTGCTTCGCCTCCATTTTCACGACTGCTTTGTCAATGGATGTGATGCGTCGGTGCTGCTTGATGACACATCGAACTTCACAGGAGAAAAAACGGCAATCCCAAATAAAGATTCGTTGAGAGGTTTTGAAGTGATCGACAATATTAAAACGCTGGTGGAGGCGATTTGCCCTTCTGTGGTTTCCTGTGCTGATATTCTGTCGATTGCAGCCCGAGAGTCGGTGGTTGCGCTTGGTGGGCCTTCGTGGGGTGTTGGGCTTGGGAGGAGGGACTCCACCACAGCCAGCTTCGACAGCGCAAACAATGATCTTCCTTCTCCCTTCCTCGACCTTCCCGATCTCATCTCCGCCTTCTCCAACAAAGGCTTCAACACCAAAGAATTGGTAGCCCTTTCAGGGTCTCACACAATAGGCCAAGCCAGATGTTCCATGTTCCGAGTAAGGGCCCATAACGAAACCACCACCATTGATTCAGAGTTTGCTGCTTCTTTGAGATCCAACTGCCCTTTCTCCGGCGGCGACGACAACCTTTCCTCTTTGGACGTACAAACCACTTCCCTCTTCGACAACGCTTATTTCAACAATTTGATACAAAACAAAGGCCTTCTTCATTCCGACCAAGCCCTCTTCAACAACGACTCTCAGTCTCATGTCACCTCTTACTCCTCCGACTCCTCTGCTTTCTTCTCCGACTTCGCCGCCGCCATGCTCAAGATGTCTAACCTCACCCCACTCACCGGAACCGCCGGCCAAATTCGTTCCGACTGCCGGAAAGTTAATTAA 960 49.58 MDSILWWKLWCVLAFGCSLISVSSGSLSANYYESSCPKLLSTVRREVVKAVSKEYRMGASLLRLHFHDCFVNGCDASVLLDDTSNFTGEKTAIPNKDSLRGFEVIDNIKTLVEAICPSVVSCADILSIAARESVVALGGPSWGVGLGRRDSTTASFDSANNDLPSPFLDLPDLISAFSNKGFNTKELVALSGSHTIGQARCSMFRVRAHNETTTIDSEFAASLRSNCPFSGGDDNLSSLDVQTTSLFDNAYFNNLIQNKGLLHSDQALFNNDSQSHVTSYSSDSSAFFSDFAAAMLKMSNLTPLTGTAGQIRSDCRKVN 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 75472120 75473495 + Tan0015527.1 Tan08g2424 762316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2424 319 Gene3D Peroxidase, domain 2 164 298 - -
Tan08g2424 319 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601(InterPro)
Tan08g2424 319 Pfam Peroxidase 43 281 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 FunFam Peroxidase 164 298 - -
Tan08g2424 319 SUPERFAMILY Heme-dependent peroxidases 27 319 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 CDD secretory_peroxidase 27 318 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan08g2424 319 ProSiteProfiles Plant heme peroxidase family profile. 26 319 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 PANTHER PEROXIDASE 72-RELATED 19 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan08g2424 319 FunFam Peroxidase 30 166 - -
Tan08g2424 319 Gene3D - 30 319 - -
Tan08g2424 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1935 Tan-Chr7:71119881 Tan08g2424 Tan-Chr8:75472120 3.80E-78 dispersed
Tan07g1936 Tan-Chr7:71119881 Tan08g2424 Tan-Chr8:75472120 1.60E-64 dispersed
Tan08g2424 Tan-Chr8:75472120 Tan11g0318 Tan-Chr11:2494991 6.40E-99 dispersed
Tan02g0179 Tan-Chr2:1577427 Tan08g2424 Tan-Chr8:75472120 1.60E-91 transposed
Tan03g2100 Tan-Chr3:75872337 Tan08g2424 Tan-Chr8:75472120 7.30E-12 transposed
Tan05g0532 Tan-Chr5:3697142 Tan08g2424 Tan-Chr8:75472120 1.70E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2424 K00430 - csv:101221157 502.671