Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g2441 | ATGGCCTCCAACCGCTGCATGAACACTTCTTGCGGAGCCGCCACGCCGCACGACTGGACCAAAGGATGGCCCCTGGGATCCGCCGGATTCGCACATCTCTGCCTCAACTGCGGATCTGCTTATGAAAATTTAGTCTTCTGTGATACGTATCACTTAGAGGAAACTGGTTGGAGGGATTGCAGTTTTTGTGGCAAGAGAATCCACTGTGGATGTATAGCCTCTAAGTCTATGTTCGAGTGTCTGGATTATGGAGGTATTGGGTGTACTAGCTGCGTGAAAAGAATTCAACTTGATGGGATCCGGAGAGATGAAATTTCTAATGGCTTTGATGCAGTGACAGTTGGTAATGTTGGCCTTCTACAACCTGCTTTGGTTGAGGATCGGCTAGTTCGAAATGGCATTAATGAGGAAAAGCTTTTACAGTTGTGTAACATCATGGAGGCAAATGAAAGCGACCATTTTCAGCAATCTCAAAGAGTTGATAGAAGTACATCTCCTGCACAAAAGAAAGGAGAAAATCTCAGGAGCCCATTTGGGGAAGTTGGAACAAGCTTCTTTAATATGACTAAACTACCTGTTAAATGCCAGCCATCTGTTGGTTCAATAACGTATTCCAAACTAGATACTAGCAGATCACACTTAGAACTGAAAGATATGCAAGAATCTCTAAGTCACCCATCGTTAAATATAACTTTGGGAGTTCCATTAGGTACACCGAACTTTGTGGTACCCTTTTCAGGAAGTGCAGCTGAAGAGGATGAAAAGAGTATTCTTCCATTTCAACAGGGCCAAAGATCTCGTCCAATTTTTCCCAAGCCCTTAAAAACCGGGACCACAGTTAATTCAGAAACAAGAAAGGGAATGGCTCCTCTGGTGCGTATTGCTCGTCCACCTGCTGAAGGTCGGGGCAAGAACCAACTTCTTCCGAGGTACTGGCCAAGGATTACTGACCAAGAGCTAGAACAATTATCTGGAGATTTGAATTCTACTATTGTTCCACTCTTTGAAAAGGTGTTGAGTGCTAGTGACGCTGGTCGAATTGGTCGTTTGGTTCTGCCAAAAGCATGCGCTGAAGCATATTTCCCCCCTATCTCTCAATCAGAGGGTCTTCCTGTTAGGATTCAAGATGTGAAGGGGAATGAATGGACATTTCAGTTCAGATTTTGGCCTAACAACAACAGCAGAATGTATGTTTTGGAGGGTGTTACCCCTTGCATACAGTCCATGCAATTACGAGCTGGTGATACTGTCACTTTTAGTCGGATAGATCCTGGAGGTCAATTAGTCATGGGATTTCGAAAAGCAACAAATTCCACGAATATACAGGATGCCAAGATCCCTACACTTTCTAATGGCTCTCATTTGGGTGATGCCTCATTCTCTGGGGTCTTTCAGAATTTGCCTTTAGGAGCTGAAGGAGATATTAGTTTGCATAAAATTGAAAATTTTGGGGGGAGGACAAATGATGCTTCAGGACAACAACCAGTGTTAACCATGGAGAAGAAAGGGGCTCGAAACATTGGGTCTAAAAATAAGAGGTTGCTCATGCACAGTGAAGATGCTTTGGAGTTAAGACTCACATGGGAAGAAGCTCAAGATCTACTCCGGCCTCCGCCAAGTGCAAACCCCACCATCGTCACTATCGACGACCATGAATTTGAAGAGTATGATGAACCTCCAGTTTTTGGCAAGAGGACTATATTCACTGTCCGACCAACTGGGGAACAGAAACAATGGGTCCAGTGTGATGATTGCTCAAAATGGCGGAGGTTGCCTGTGGATGTTCTTCTCCCTCCAAAGTGGACTTGTTCGGATAATGTTTGGGATTTGAGCAGGTGTACATGTTCCGCACCAGAAGAGATCAGCACAAAGGAACAGGAGAATCTTCTAAGAGCGAGTAAAGATTTTAAGAAACGTAAAATCATGAAGAGCCCGAAGTCTGCTCAAGAACTCGAGCCTTCTGGTTTGGATGCGCTGGCCAGTGCTGCCGTTCTGGGTGATGGTATGGCCGACTTGCAGGAATCGGGTACAACAACTAGACATCCTCGACACAGACCAGGATGCACTTGCATTGTGTGCATTCAGCCTCCAAGTGGGAAGGGAAAGCACAAATCCACATGCACATGCAATGTCTGCTTGACTGTAAAACGCCGTTTTAAAACACTCATGCTGCGCAAGAAGAAACGCCAATCAGAACGTGAGGTGGGGACTCTGCTCAAGGATGCAAATCCACAATTTGATGAATCAGGAACGAGTGGAACACTGAGGGGTACATCTCTGCAAACAAACCATTCAGAGAATGAAGGAAGTCAGAGCAGGATAAAAGATGAGGAGGCTGCAAATAGCAGTGGGCAAATTGACTTGAACTGCCACCCGGACCGTGTGGACATGCAACTGGAGGTAGCAGGGTTGAGCATGATGAGTCTTGTCGAGGCTGCCAGCCAACCTTTAGAGAGCTATTCAAAGCAAGTCTCCAGCGTCACGAGTGAACAGCACTCCAGTCAACCAAGTAGTGTGGAGTGA | 2523 | 45.66 | MASNRCMNTSCGAATPHDWTKGWPLGSAGFAHLCLNCGSAYENLVFCDTYHLEETGWRDCSFCGKRIHCGCIASKSMFECLDYGGIGCTSCVKRIQLDGIRRDEISNGFDAVTVGNVGLLQPALVEDRLVRNGINEEKLLQLCNIMEANESDHFQQSQRVDRSTSPAQKKGENLRSPFGEVGTSFFNMTKLPVKCQPSVGSITYSKLDTSRSHLELKDMQESLSHPSLNITLGVPLGTPNFVVPFSGSAAEEDEKSILPFQQGQRSRPIFPKPLKTGTTVNSETRKGMAPLVRIARPPAEGRGKNQLLPRYWPRITDQELEQLSGDLNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPVRIQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLRAGDTVTFSRIDPGGQLVMGFRKATNSTNIQDAKIPTLSNGSHLGDASFSGVFQNLPLGAEGDISLHKIENFGGRTNDASGQQPVLTMEKKGARNIGSKNKRLLMHSEDALELRLTWEEAQDLLRPPPSANPTIVTIDDHEFEEYDEPPVFGKRTIFTVRPTGEQKQWVQCDDCSKWRRLPVDVLLPPKWTCSDNVWDLSRCTCSAPEEISTKEQENLLRASKDFKKRKIMKSPKSAQELEPSGLDALASAAVLGDGMADLQESGTTTRHPRHRPGCTCIVCIQPPSGKGKHKSTCTCNVCLTVKRRFKTLMLRKKKRQSEREVGTLLKDANPQFDESGTSGTLRGTSLQTNHSENEGSQSRIKDEEAANSSGQIDLNCHPDRVDMQLEVAGLSMMSLVEAASQPLESYSKQVSSVTSEQHSSQPSSVE | 840 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 75585057 | 75600119 | - | Tan0014424.2 | Tan08g2441 | 762333 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g2441 | 840 | ProSiteProfiles | B3 DNA-binding domain profile. | 335 | 436 | IPR003340 | GO:0003677(InterPro) | |
Tan08g2441 | 840 | MobiDBLite | consensus disorder prediction | 725 | 792 | - | - | |
Tan08g2441 | 840 | MobiDBLite | consensus disorder prediction | 744 | 768 | - | - | |
Tan08g2441 | 840 | MobiDBLite | consensus disorder prediction | 153 | 175 | - | - | |
Tan08g2441 | 840 | SMART | B3_2 | 335 | 435 | IPR003340 | GO:0003677(InterPro) | |
Tan08g2441 | 840 | Pfam | CW-type Zinc Finger | 578 | 621 | IPR011124 | GO:0008270(InterPro) | |
Tan08g2441 | 840 | CDD | B3_DNA | 333 | 434 | IPR003340 | GO:0003677(InterPro) | |
Tan08g2441 | 840 | PANTHER | B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 | 1 | 833 | - | - | |
Tan08g2441 | 840 | Pfam | B3 DNA binding domain | 335 | 434 | IPR003340 | GO:0003677(InterPro) | |
Tan08g2441 | 840 | SUPERFAMILY | DNA-binding pseudobarrel domain | 332 | 436 | IPR015300 | - | |
Tan08g2441 | 840 | Gene3D | - | 313 | 440 | IPR015300 | - | |
Tan08g2441 | 840 | MobiDBLite | consensus disorder prediction | 815 | 840 | - | - | |
Tan08g2441 | 840 | MobiDBLite | consensus disorder prediction | 153 | 171 | - | - | |
Tan08g2441 | 840 | ProSiteProfiles | Zinc finger CW-type profile. | 573 | 623 | IPR011124 | GO:0008270(InterPro) | |
Tan08g2441 | 840 | Gene3D | - | 570 | 622 | - | - | |
Tan08g2441 | 840 | FunFam | B3 domain-containing transcription repressor VAL1 | 313 | 440 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g2425 | Tan-Chr3:77845309 | Tan08g2441 | Tan-Chr8:75585057 | 3.00E-162 | dispersed | |
Tan03g2426 | Tan-Chr3:77845309 | Tan08g2441 | Tan-Chr8:75585057 | 3.00E-162 | dispersed | |
Tan08g2237 | Tan-Chr8:73914355 | Tan08g2441 | Tan-Chr8:75585057 | 3.00E-182 | dispersed | |
Tan08g2238 | Tan-Chr8:73914355 | Tan08g2441 | Tan-Chr8:75585057 | 1.80E-193 | dispersed | |
Tan08g2441 | Tan-Chr8:75585057 | Tan11g1474 | Tan-Chr11:13450125 | 1.80E-15 | dispersed | |
Tan08g2440 | Tan-Chr8:75585057 | Tan08g2441 | Tan-Chr8:75585057 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28264 | PF02362 | B3 | 3.40E-16 | CL0405 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g2441 | K09287 | - | csv:101214226 | 1396.72 |