Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2446 ATGGCGGACGACGTTCAGAATGATGTGAACGATCAGGTAGCAGATATTGCCCCCTTTGATCCTACTAAGAAGAAGAAGAAGAAGAAGGTTGTACTTCAGGATCCGGGTGATGAGTCTGTTGACAAGTTAGCAGAGAAAACTGAAAGTTTGTTAGTTTCTGATGGTTTAGAGACTACCACATTTTCTGGACTTAAAAAGAAGAAGAAAAAACCAGTAGAGGCCTGCTCCTTGAATGACGATGGTGCAGAAGCCACAGAGGATTTGGAAGATCAAGCGGGGGAGAATGAGAAACGAGAGGGAATTGTTCTTCAGTATCGTTATCCTTGGGAGGGAAGTGATCGTGATTATGAATACGAGGAGCTTCTTGGACGGGTATTCAACATTCTTAGAGAGAATAACCCAGAGCTTGCAGGTGATAGGCGTAGAACAGTTATGAGACCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTCAATTTCATGGATCTATGTAAAACGATGCATCGCCAGCCAGACCATGTTATGGCTTTCTTATTGGCCGAACTGGGAACCAGTGGATCTCTTGATGGGCAGCAGAGATTAGTTGTTAAGGGAAGGTTTGCACCAAAGAACTTTGAAGGAATTTTGCGTCGATATGTCAATGAATATGTGATTTGCATTGGGTGCAAGAGTCCAGACACTATCCTTTCAAAGGAGAATCGACTCTTCTTTCTCAGATGCGAGAAGTGTGGTTCTGGACGATCGGTTGCTCCAATTAAAGCTGGTTTTGTTGCTCGTGTTGGCCGGAGGAACACAGGGACATGA 813 44.03 MADDVQNDVNDQVADIAPFDPTKKKKKKKVVLQDPGDESVDKLAEKTESLLVSDGLETTTFSGLKKKKKKPVEACSLNDDGAEATEDLEDQAGENEKREGIVLQYRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 75610801 75646587 - Tan0019301.1 Tan08g2446 762338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2446 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 25 256 IPR045196 GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005850(PANTHER)|GO:0006413(InterPro)|GO:0031369(PANTHER)
Tan08g2446 270 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 219 254 IPR016190 GO:0003743(InterPro)|GO:0006413(InterPro)
Tan08g2446 270 Gene3D - 113 255 - -
Tan08g2446 270 Pfam Domain found in IF2B/IF5 139 248 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Tan08g2446 270 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 115 222 IPR016189 GO:0003743(InterPro)|GO:0006413(InterPro)
Tan08g2446 270 FunFam Eukaryotic translation initiation factor 2 subunit 113 255 - -
Tan08g2446 270 SMART eIF2Bneu4 140 249 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Tan08g2446 270 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1569 Tan-Chr6:24650086 Tan08g2446 Tan-Chr8:75610801 8.50E-145 dispersed
Tan06g1570 Tan-Chr6:24650086 Tan08g2446 Tan-Chr8:75610801 4.40E-130 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2446 K03238 - csv:101220978 511.916