Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g2449 ATGTACAAAATAATGATTATTTGGTCAGTTTCACATGGCAGGTCAATTGCAAATAATTCATTGAACGGCTCTGTTCCATCCACCATATGGCAAAGCAGGACACTCAATTCTTTGGAAAGCCTTACAGTAGAGCTGCAGAACAATAATTTTTCAAATATTTCGGGAAACATCGATCTCCCTCGGAATGTCACTGTCTGGCTTCAAGGAAATCCTGCTTGTTTTGATAACAGCCTGGTGGACTTCTGTGGATCTGAGAGCGAGGATATAATTGACATTCCAACAAATAACACTCTTGGCTGTTCTGGGCCAATATGCCCACCTTCTTACGAATGTTACTCAGCAAAATGTCCCTCATCTTGTGTCTGTTCTGCACCTCTTCTTATTTTATATCGTTTGAAAAGTCCCGGATTCTCACGTTTTAGTCCATATCAACATATGTTTGAGGAGTACCTAACCAGTGGTCTTAAGTTACATCTTGAACAATTGGACATTGGTTCTCCTGTGTGGGAAAAAGGACCTCGATTAAGAATGAACCTGAAGCTTTTCCCTCTGTATGTTGCTGATAGCAATAGTTCTCACATGTTCAATGACAGCGAGGTTGTACGAATTGTTTCCAAGTTTACGAATTGGAAAATTCAAGATAGCGACATATTTGGACCATATGAACTTCTCAGCTTGACAATATCAGACGTTTATAAGAAGGTGTTTGTTACACCATCATCTGATTCTACTATGAGTAAAGGGGCATTGGCTGGAATAATATTAGGAGCAATTGCTGGCGGAGCGACACTATCTGCAATTGCTTTTATTTTTATTATAAGATCACGTGTGAGGGGCCGCCACATCTCAAGAAGGCGTCACCTGTCAAAAACCTCCATAAAGATTGAGGGCGTAAAGGAGTTCGGTTACCGTGAAATGGCTCTAGCTACAAACAATTTTCACGATTCCACGGTAGTTGGTCAAGGTGGTTATGGAAAGGTTTACAAAGGAATTCTAGCAGATTGCACAGCTGTTGCTATCAAACGTGCACAGGAGGGCTCACTACAGGGTGAAAAAGAGTTCCTAACTGAAATACAATTATTGTCAAGGTTACACCACCGAAATCTTGTGGCTTTGATTGGATATTGTGATGAAGAAGGGGAGCAGATGTTGGTTTATGAGTTTATGTCAAATGGCACGCTGAGGGATCACCTTTCTGTAAATTCTGCGGAACCTTTGAGTTTTGCCACGAGATTGAAAGCTGCCCTGGGTGCAGCTAAGGGAATTCTGTACCTGCACACGGAAGCTGATCCTCCAATATTCCACCGAGATATCAAGTCCAGCAACATATTATTAGACTCTAAATATGTGGCAAAGGTTGCTGATTTTGGACTTTCACGACTTGCACCTCTACCAGATACAGAAGGCGATGTGCCTGCTCATGTATCGACAGTAGTAAAAGGGACACCGGGTTATCTTGATCCAGAGTACTTCTTTACTCATAAATTGACAGATAAGAGTGATGTTTATAGTCTTGGTGTTGTGTTTTTGGAGCTTTTAACTGGGAGGCACCCCATCTCACACGGCAAGAACATCGTTAGGGAGGTTAACGGTGCATATCAGTCCGGAAAAATTTTCTCAATAATTGATGGTCGACTGGGATCTTATCCTGCTGAATGTGTTGAAAGGTTTGTGACTTTGGCTCTGAAGTGTTGCCAAGACGATACAGATGCACGCCCTTCAATGGCAGAAGTTGTTCGAACACTTGAAAATATTTGGCTTATGCTGCCCGAGTCTGATACGAAAATTACAGAGCCTTTGATCACCGATGTCATAAAAGTGACGAGTGCCCCATCTTCATCATCCAACATGAATAACTATTACATATCAGAAGTCTCTGGCAGTGACCTTGTAAGTGGAGTAACTCCCACCATCACACCCAGATAG 1926 42.06 MYKIMIIWSVSHGRSIANNSLNGSVPSTIWQSRTLNSLESLTVELQNNNFSNISGNIDLPRNVTVWLQGNPACFDNSLVDFCGSESEDIIDIPTNNTLGCSGPICPPSYECYSAKCPSSCVCSAPLLILYRLKSPGFSRFSPYQHMFEEYLTSGLKLHLEQLDIGSPVWEKGPRLRMNLKLFPLYVADSNSSHMFNDSEVVRIVSKFTNWKIQDSDIFGPYELLSLTISDVYKKVFVTPSSDSTMSKGALAGIILGAIAGGATLSAIAFIFIIRSRVRGRHISRRRHLSKTSIKIEGVKEFGYREMALATNNFHDSTVVGQGGYGKVYKGILADCTAVAIKRAQEGSLQGEKEFLTEIQLLSRLHHRNLVALIGYCDEEGEQMLVYEFMSNGTLRDHLSVNSAEPLSFATRLKAALGAAKGILYLHTEADPPIFHRDIKSSNILLDSKYVAKVADFGLSRLAPLPDTEGDVPAHVSTVVKGTPGYLDPEYFFTHKLTDKSDVYSLGVVFLELLTGRHPISHGKNIVREVNGAYQSGKIFSIIDGRLGSYPAECVERFVTLALKCCQDDTDARPSMAEVVRTLENIWLMLPESDTKITEPLITDVIKVTSAPSSSSNMNNYYISEVSGSDLVSGVTPTITPR 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 75755826 75782317 + Tan0012944.1 Tan08g2449 762341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g2449 641 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 389 598 - -
Tan08g2449 641 SMART serkin_6 313 587 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2449 641 FunFam Leucine-rich repeat protein kinase family protein 277 388 - -
Tan08g2449 641 SUPERFAMILY Protein kinase-like (PK-like) 299 613 IPR011009 -
Tan08g2449 641 Gene3D Phosphorylase Kinase; domain 1 284 388 - -
Tan08g2449 641 PANTHER RECEPTOR-LIKE PROTEIN 55 16 583 - -
Tan08g2449 641 ProSiteProfiles Protein kinase domain profile. 313 587 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2449 641 Pfam Protein kinase domain 314 580 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g2449 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g2449 641 CDD STKc_IRAK 319 585 - -
Tan08g2449 641 Gene3D Transferase(Phosphotransferase) domain 1 389 596 - -
Tan08g2449 641 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0695 Tan-Chr1:6678109 Tan08g2449 Tan-Chr8:75755826 1.10E-67 dispersed
Tan01g0696 Tan-Chr1:6678858 Tan08g2449 Tan-Chr8:75755826 1.10E-67 dispersed
Tan08g2449 Tan-Chr8:75755826 Tan10g1504 Tan-Chr10:23066185 7.00E-89 dispersed
Tan08g2449 Tan-Chr8:75755826 Tan03g0690 Tan-Chr3:62368830 3.60E-178 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68004 PF00069 Pkinase 3.00E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g2449 - - - 0.0