Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0029 ATGGCCAAGCTTTTGCTCCTTGCACTGGCTTTTACCAAATGGGTTCATGCCTTTCACCCCTCTAATCTCTCTGATTCATCTCTCTTCGATTCTTATGAAACTTCCTTTGCTGTCACTGCTAATCCTCTCATGGTGGGACTCACTCTCATTCATGGAGCTGATGCACAACAAGCTGTCTGTTTAGATGGCACATTACCTGGATATCACTTGCACCGTGGATATGGGTCAGGAGCAAATAGCTGGCTTGTTCAATTGGAGGGAGGTGGATGGTGTAACAATATCAGGAATTGTGTCTACCGGAAAACAACCAGGCGTGGATCGTCAAGATTTATGGAGAAGCAGATACCATTTACAGGAATACTGAGCAACAGAGCTGAAGAAAATCCTGATTTTTTTAATTGGAACAGAGTAAAGGTCCGTTACTGTGATGGTGCCTCTTTCACTGGGGATTCTGAAAACAAGGCTGCACAGTTGCAATTTAGAGGACAGCGGATTTGGTTGGCTGCAATGGAAGCATTGAAGGCTGAGGGAATGCGATTTGCAAATCAGGCCTTGCTTTCTGGCTGCTCTGCGGGAGGTTTGGCATCTATTCTACACTGTGATGAGTTTCGAGACTTATTTCCAAGAACTACTAAAGTGAAATGTCTGAGTGATGCTGGACTATTCCTTGACGTGGCTGATATATCTGGAGGGCACTATATTAGGAACTTATTTGGTGGTGTGGTGAGCTTGCAGGGAGCTCAAAGGAATCTTCCATCCGGTTGTACTAACCATCTCAATCCAATTTCGTGTTTCTTCCCACAAAATTTAATTGCTGGAATCAGAACCCCACTGTTTCTTGTCAATGCTGCATACGATTCCTGGCAGATACAATCTAGTATAGCCCCACCTTCTCTGGATCCGGCTGGGTATTGGCATGATTGTAGGCTGGATCACGCGAAATGTAACCAGCCTCAGATCCAATTTCTTCAAGGATTCAGGAACCAAATGTTGAATGCTGTTAGGGACTTCTCAAAATCATACAAAAATGGGTTATTTATTAATTCATGTTTTGCTCACTGCCAAACTGAAAGACAGGATACATGGTTTGGCGACAATTCTCCCGTCATTGGAAACAAGCCAATTGCTCTGGCTGTTGGAGACTGGTACTTCGACCGAGCAGCGGTGAAAGCAATCGATTGTCCCTACCCGTGTGACAGGACTTGCCACCATCTGGTTTTTAGAAGCGGTTAG 1233 44.77 MAKLLLLALAFTKWVHAFHPSNLSDSSLFDSYETSFAVTANPLMVGLTLIHGADAQQAVCLDGTLPGYHLHRGYGSGANSWLVQLEGGGWCNNIRNCVYRKTTRRGSSRFMEKQIPFTGILSNRAEENPDFFNWNRVKVRYCDGASFTGDSENKAAQLQFRGQRIWLAAMEALKAEGMRFANQALLSGCSAGGLASILHCDEFRDLFPRTTKVKCLSDAGLFLDVADISGGHYIRNLFGGVVSLQGAQRNLPSGCTNHLNPISCFFPQNLIAGIRTPLFLVNAAYDSWQIQSSIAPPSLDPAGYWHDCRLDHAKCNQPQIQFLQGFRNQMLNAVRDFSKSYKNGLFINSCFAHCQTERQDTWFGDNSPVIGNKPIALAVGDWYFDRAAVKAIDCPYPCDRTCHHLVFRSG 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1437824 1444814 + Tan0022338.1 Tan09g0029 762372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0029 410 Pfam Pectinacetylesterase 40 387 IPR004963 GO:0016787(InterPro)
Tan09g0029 410 PANTHER NOTUM-RELATED 32 404 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0244 Tan-Chr1:2086313 Tan09g0029 Tan-Chr9:1437824 7.30E-114 dispersed
Tan01g1032 Tan-Chr1:10111802 Tan09g0029 Tan-Chr9:1437824 1.40E-127 dispersed
Tan03g0952 Tan-Chr3:65993579 Tan09g0029 Tan-Chr9:1437824 1.10E-118 dispersed
Tan03g0953 Tan-Chr3:65993579 Tan09g0029 Tan-Chr9:1437824 1.10E-66 dispersed
Tan03g0954 Tan-Chr3:65996220 Tan09g0029 Tan-Chr9:1437824 4.10E-63 dispersed
Tan09g0029 Tan-Chr9:1437824 Tan09g0030 Tan-Chr9:1437824 2.80E-184 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0029 K19882 - csv:101218273 800.045