Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0038 ATGGTTTTTTCATTAAACAGAATAACAGGGATATTAGGGTTCCACAGGGAAGAGGAAGACCAGAGACTACAGCCCTTCTGCTCTCGGAGGCCAGGAAAAATGGATTATCGAAGTTATAGCAGTCGACTGGAAACAAGCAACCCGAATAAAGGCTACGCTCAGGAGCAGGAATATCTGGCTGATGACTTTGTAGACGATTTTCGCTTGTCCATCAACCACAAACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCATTGGACACACAATTAACTTCATCGAATGTGGGATATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGGAAGGATGAGCAAGGAATTGTTGAGCCGATAAAATCTGGAATTAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAGGAAAATATCCAGCGGAAAAGACTTGATGTTGAGGTGGAAGAGACAGAGGAACATGCCAAAAAACGGGAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTCAAAGAAATACGCAAGGTTTTCTATTGTGATCTTTGCAACAAGCAGTACAAATTGGCAATGGAATTTGAAGCTCATCTCAGCTCATATGATCACAATCATAGAAAGCGTTTCAAAGAAATGAGAGAAATGCATGGTACAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAGGGAAATGGCAAAATTTGCTCAAATTGCGGATGCCCGTAAGAAGCAGCAGCAGATGACGGAGCAACAAGAAAGATCAGTTGATGCTTCTGTTTCTACTGAACTTAGAAATGCTACATCACTTGGAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAGAGGTGGCACCTCAAAGAACATTTTTGGTGGAGCCACAAAGAAACCAAAGGTAGCGACTGTAGCTTCAGTTTTTGGGAACGATAGTGATGACGAATAG 999 42.24 MVFSLNRITGILGFHREEEDQRLQPFCSRRPGKMDYRSYSSRLETSNPNKGYAQEQEYLADDFVDDFRLSINHKPTENVDLDNVEQASLDTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIVEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRKRLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGTSSRDDRNKREQQREEREMAKFAQIADARKKQQQMTEQQERSVDASVSTELRNATSLGDQDQRKTLKFGFSSRGGTSKNIFGGATKKPKVATVASVFGNDSDDE 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1759264 1763825 - Tan0019071.3 Tan09g0038 762381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0038 332 SUPERFAMILY beta-beta-alpha zinc fingers 171 223 IPR036236 -
Tan09g0038 332 MobiDBLite consensus disorder prediction 266 307 - -
Tan09g0038 332 SMART G-patch_5 93 138 IPR000467 GO:0003676(InterPro)
Tan09g0038 332 MobiDBLite consensus disorder prediction 224 311 - -
Tan09g0038 332 Pfam G-patch domain 96 136 IPR000467 GO:0003676(InterPro)
Tan09g0038 332 ProSiteProfiles G-patch domain profile. 95 140 IPR000467 GO:0003676(InterPro)
Tan09g0038 332 MobiDBLite consensus disorder prediction 224 253 - -
Tan09g0038 332 ProSitePatterns Zinc finger C2H2 type domain signature. 192 214 IPR013087 -
Tan09g0038 332 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 34 332 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0036 Tan-Chr9:1759264 Tan09g0038 Tan-Chr9:1759264 4.10E-140 dispersed
Tan09g0037 Tan-Chr9:1759264 Tan09g0038 Tan-Chr9:1759264 4.10E-140 tandem
Tan09g0038 Tan-Chr9:1759264 Tan09g0039 Tan-Chr9:1759264 1.00E-139 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0038 - - - 0.0