Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0039 ATGGATTATCGAAGTTATAGCAGTCGACTGGAAACAAGCAACCCGAATAAAGGCTACGCTCAGGAGCAGGAATATCTGGCTGATGACTTTGTAGACGATTTTCGCTTGTCCATCAACCACAAACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCATTGGACACACAATTAACTTCATCGAATGTGGGATATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGGAAGGATGAGCAAGGAATTGTTGAGCCGATAAAATCTGGAATTAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAGGAAAATATCCAGCGGAAAAGACTTGATGTTGAGGTGGAAGAGACAGAGGAACATGCCAAAAAACGGGAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTCAAAGAAATACGCAAGGTTTTCTATTGTGATCTTTGCAACAAGCAGTACAAATTGGCAATGGAATTTGAAGCTCATCTCAGCTCATATGATCACAATCATAGAAAGCGTTTCAAAGAAATGAGAGAAATGCATGGTACAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAGGGAAATGGCAAAATTTGCTCAAATTGCGGATGCCCGTAAGAAGCAGCAGCAGATGACGGAGCAACAAGAAAGATCAGTTGATGCTTCTGTTTCTACTGAACTTAGAAATGCTACATCACTTGGAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAGAGGTGGCACCTCAAAGAACATTTTTGGTGGAGCCACAAAGAAACCAAAGGTAGCGACTGTAGCTTCAGTTTTTGGGAACGATAGTGATGACGAATAG 900 41.89 MDYRSYSSRLETSNPNKGYAQEQEYLADDFVDDFRLSINHKPTENVDLDNVEQASLDTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIVEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRKRLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGTSSRDDRNKREQQREEREMAKFAQIADARKKQQQMTEQQERSVDASVSTELRNATSLGDQDQRKTLKFGFSSRGGTSKNIFGGATKKPKVATVASVFGNDSDDE 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1759264 1763825 - Tan0019071.4 Tan09g0039 762382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0039 299 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 299 - -
Tan09g0039 299 SMART G-patch_5 60 105 IPR000467 GO:0003676(InterPro)
Tan09g0039 299 Pfam G-patch domain 63 103 IPR000467 GO:0003676(InterPro)
Tan09g0039 299 MobiDBLite consensus disorder prediction 191 220 - -
Tan09g0039 299 MobiDBLite consensus disorder prediction 191 278 - -
Tan09g0039 299 ProSitePatterns Zinc finger C2H2 type domain signature. 159 181 IPR013087 -
Tan09g0039 299 SUPERFAMILY beta-beta-alpha zinc fingers 138 190 IPR036236 -
Tan09g0039 299 ProSiteProfiles G-patch domain profile. 62 107 IPR000467 GO:0003676(InterPro)
Tan09g0039 299 MobiDBLite consensus disorder prediction 233 274 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0037 Tan-Chr9:1759264 Tan09g0039 Tan-Chr9:1759264 4.10E-140 dispersed
Tan09g0038 Tan-Chr9:1759264 Tan09g0039 Tan-Chr9:1759264 1.00E-139 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0039 - - - 0.0