Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g0039 | ATGGATTATCGAAGTTATAGCAGTCGACTGGAAACAAGCAACCCGAATAAAGGCTACGCTCAGGAGCAGGAATATCTGGCTGATGACTTTGTAGACGATTTTCGCTTGTCCATCAACCACAAACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCATTGGACACACAATTAACTTCATCGAATGTGGGATATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGGAAGGATGAGCAAGGAATTGTTGAGCCGATAAAATCTGGAATTAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAGGAAAATATCCAGCGGAAAAGACTTGATGTTGAGGTGGAAGAGACAGAGGAACATGCCAAAAAACGGGAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTCAAAGAAATACGCAAGGTTTTCTATTGTGATCTTTGCAACAAGCAGTACAAATTGGCAATGGAATTTGAAGCTCATCTCAGCTCATATGATCACAATCATAGAAAGCGTTTCAAAGAAATGAGAGAAATGCATGGTACAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAGGGAAATGGCAAAATTTGCTCAAATTGCGGATGCCCGTAAGAAGCAGCAGCAGATGACGGAGCAACAAGAAAGATCAGTTGATGCTTCTGTTTCTACTGAACTTAGAAATGCTACATCACTTGGAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAGAGGTGGCACCTCAAAGAACATTTTTGGTGGAGCCACAAAGAAACCAAAGGTAGCGACTGTAGCTTCAGTTTTTGGGAACGATAGTGATGACGAATAG | 900 | 41.89 | MDYRSYSSRLETSNPNKGYAQEQEYLADDFVDDFRLSINHKPTENVDLDNVEQASLDTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIVEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRKRLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGTSSRDDRNKREQQREEREMAKFAQIADARKKQQQMTEQQERSVDASVSTELRNATSLGDQDQRKTLKFGFSSRGGTSKNIFGGATKKPKVATVASVFGNDSDDE | 299 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1759264 | 1763825 | - | Tan0019071.4 | Tan09g0039 | 762382 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g0039 | 299 | PANTHER | FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED | 1 | 299 | - | - | |
Tan09g0039 | 299 | SMART | G-patch_5 | 60 | 105 | IPR000467 | GO:0003676(InterPro) | |
Tan09g0039 | 299 | Pfam | G-patch domain | 63 | 103 | IPR000467 | GO:0003676(InterPro) | |
Tan09g0039 | 299 | MobiDBLite | consensus disorder prediction | 191 | 220 | - | - | |
Tan09g0039 | 299 | MobiDBLite | consensus disorder prediction | 191 | 278 | - | - | |
Tan09g0039 | 299 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 159 | 181 | IPR013087 | - | |
Tan09g0039 | 299 | SUPERFAMILY | beta-beta-alpha zinc fingers | 138 | 190 | IPR036236 | - | |
Tan09g0039 | 299 | ProSiteProfiles | G-patch domain profile. | 62 | 107 | IPR000467 | GO:0003676(InterPro) | |
Tan09g0039 | 299 | MobiDBLite | consensus disorder prediction | 233 | 274 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan09g0037 | Tan-Chr9:1759264 | Tan09g0039 | Tan-Chr9:1759264 | 4.10E-140 | dispersed | |
Tan09g0038 | Tan-Chr9:1759264 | Tan09g0039 | Tan-Chr9:1759264 | 1.00E-139 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g0039 | - | - | - | 0.0 |