Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0053 ATGGCTGCTGGTGGTGATTTCTTGCCACCCTTGGTAATGGTGGTTGTCCAATTCCTCTTTGCAGGCTTGAATATTACATCAAAGTTAGCTATGGAGTTTGGGATGAATCCACTGGTTCTAGTTGCTTACAGGCAGATGTTTGCTACCATAGCCATAGCTCCTTGTGCTTATTGGTTTGAGAGAAAAGGGAGACCCAAAATTACAAAGCCTATTCTGTTTCAGATTCTACTGTGTTCCTTAACTGGAGCAACAGCAAACCAAGTCTTTTACTATGTTGGGTTAAAATATTCAACCCCCACCATCGCATGTGCTTTGACCAATGTCCTGCCTGCTGCAACTTTTGTCCTCGCTGTTCTTTTCAGACAAGAATCTGTGGGGATCAAGACAAGTCCAGGTGCAGCCAAGGTGATCGGGACTGTCGTGTGCGTTGGAGGGGCAATGTTCCTGTCGTTCTACCGTGGAAAAACCATCGAGCTGGGTGAATCTGGGATTCATTGGAAGTATGCCGAGATGATGAGGGGGGAAAGTTCCACCAGCCAAGGCAGCAGCATCTGGGGCTCTCTCTGCTTGATCATAAGCTCTGTTGCTTGGGCGGCTTGGTTTGTAATCCAAGGGAAAGTGAATTCTCAGTTTCCAGCTCCCTACACGAGCACAGCTCTCATGACTTTCATGGCAACCATTCAATGTGGAGCAATCGCCGTTGGCGTTGAGCACAATACTGCTGCAGCTTGGTCATTGAAAAGCTCAATCAGGCTTGTTGGCGCTCTCTATGCGGGAGTGGCGTGCTCTGGCGTTGCATTTTGCCTAACCTCCTGGAGTATCCAAAAGAAAGGCCCTCTCTATGCCTCAGTTTTCAGCCCCTTCTTGCTCGTTATCGTGGCTATTTTCAGCTGGGCCTTCTTTCAAGAAAAATTATACGTAGGAACTGTTGTAGGGTCGTTGTTGATTGTTGTTGGGCTTTATGCTGTCCTATGGGGAAAGACAAAAGAGGTGAAACTACAACAAGATATCAAAATGGCAGCGGTAGCAGAGGCAAAGCTAGATGACTGTAATAACAAAGATGACTTGGAAGAACAGTCCTATGTGGTTTCAAATGCCAATATCCTCCATAAGTAA 1116 46.59 MAAGGDFLPPLVMVVVQFLFAGLNITSKLAMEFGMNPLVLVAYRQMFATIAIAPCAYWFERKGRPKITKPILFQILLCSLTGATANQVFYYVGLKYSTPTIACALTNVLPAATFVLAVLFRQESVGIKTSPGAAKVIGTVVCVGGAMFLSFYRGKTIELGESGIHWKYAEMMRGESSTSQGSSIWGSLCLIISSVAWAAWFVIQGKVNSQFPAPYTSTALMTFMATIQCGAIAVGVEHNTAAAWSLKSSIRLVGALYAGVACSGVAFCLTSWSIQKKGPLYASVFSPFLLVIVAIFSWAFFQEKLYVGTVVGSLLIVVGLYAVLWGKTKEVKLQQDIKMAAVAEAKLDDCNNKDDLEEQSYVVSNANILHK 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2617891 2621173 + Tan0007278.1 Tan09g0053 762396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0053 371 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020(InterPro)
Tan09g0053 371 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020(InterPro)
Tan09g0053 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 328 - -
Tan09g0053 371 PANTHER WAT1-RELATED PROTEIN 11 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan09g0053 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 152 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0053 Tan-Chr9:2617891 Tan11g2035 Tan-Chr11:40353829 1.60E-61 dispersed
Tan01g0020 Tan-Chr1:540259 Tan09g0053 Tan-Chr9:2617891 2.10E-45 transposed
Tan07g0144 Tan-Chr7:3874361 Tan09g0053 Tan-Chr9:2617891 8.10E-58 transposed
Tan08g0693 Tan-Chr8:6872296 Tan09g0053 Tan-Chr9:2617891 1.90E-115 wgd
Tan08g1287 Tan-Chr8:43761805 Tan09g0053 Tan-Chr9:2617891 4.70E-59 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0053 - - - 0.0