Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0071 ATGGATGCGATTGTTTCTAACCTAGAAGAGCCGAGGAATTCCGATTTGACGGAGCAGCGGCCGAGTAAACGCAGAAAAATTGAATCGGAGATTCGCGGCGCCGAATCCACGGATTTGAGAAGACGGTGGAGAACAGAGTCGGAGCAGAAGATTTACTCTTCGAAACTAGTCGAGGCTCTCCATCGAGTAAGTCAGAAATCCGCATCGCCGCCCGCGAGATCTTCGATCAACGGCCGCAAAGTCCGCGAGACGGCGGACCGAGTCCTCGCCGTCGCTGCCAAAGGCAAGACGCGGTGGAGCAGAGCGATCTTAACAAATCGACTCGATCTCCAACTCAAGAAGCACAAGAAGGTGAAACCGGCCGGAAACTGCAGCCGGCCGAAGAAATTGAAAATATCTAAGACGAGGAAATTGCCGGCGGTGCAGCGGAAAGTTCGAACTCTCGGCCGCCTGGTTCCCGGCTGCCGGAAAGTTTCATTCCCGAACCTCCTTGAAGAAGCTACAGATTACATCGCGGCTCTACAGATGCAGGTCCGCGCCATGACAGCCGTCGCCGAGCTTCTCGCCGGCGCTCCGGCCGATCGTCAAAGCTACCGAACGAATTCGTAG 609 55.5 MDAIVSNLEEPRNSDLTEQRPSKRRKIESEIRGAESTDLRRRWRTESEQKIYSSKLVEALHRVSQKSASPPARSSINGRKVRETADRVLAVAAKGKTRWSRAILTNRLDLQLKKHKKVKPAGNCSRPKKLKISKTRKLPAVQRKVRTLGRLVPGCRKVSFPNLLEEATDYIAALQMQVRAMTAVAELLAGAPADRQSYRTNS 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3157852 3159244 - Tan0005108.1 Tan09g0071 762414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0071 202 CDD bHLH_AtIBH1_like 130 183 IPR044549 GO:0006355(InterPro)
Tan09g0071 202 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 125 174 IPR011598 GO:0046983(InterPro)
Tan09g0071 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 43 188 IPR044660 GO:0006355(InterPro)
Tan09g0071 202 MobiDBLite consensus disorder prediction 13 40 - -
Tan09g0071 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 190 IPR036638 GO:0046983(InterPro)
Tan09g0071 202 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1643 Tan-Chr1:17066534 Tan09g0071 Tan-Chr9:3157852 7.40E-37 transposed
Tan06g2777 Tan-Chr6:79941300 Tan09g0071 Tan-Chr9:3157852 6.10E-39 transposed
Tan10g1085 Tan-Chr10:10157437 Tan09g0071 Tan-Chr9:3157852 5.50E-30 transposed
Tan08g0681 Tan-Chr8:6761334 Tan09g0071 Tan-Chr9:3157852 1.30E-43 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0071 - - - 0.0