Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0076 ATGGTTTGTGAAGAAGAAGCTCTAATCCAAAAGGTCTGTGATTTGTATGAACAAATCTCATGCCTTGAAAGCCTCAAACCTTGTAAACATGTCGACACTCTCTTCACTCAGCTGGTACTCACGTGCATGCCACCCACAAGCCCTCATTTCCACATCAATTCACTCTCAAAACCACTTCAACTAATGAGGTCAAATCTCATTCGTCTTTGTGCTCAAGCTGAGTCTCTTTTAGAGTCTCATTTCTCTGATCTCTTAGCTAAATTTGATTCCCCTCTTCACCATCTCCATCTCTTCCCTTACTTCTCTAACTACCTCAAACTTTCCCTCCTTGAATTCTCCATCCTCCGCCGCCACTGCCCCGCCCTCCCCTCCGCCGTTGCCTTCGTCGGCTCTGGTCCCCTTCCTCTCACCTCCATCGTCCTCGCCACTCGCCACCTCACCTCCACCGCTTTCCACAATTACGATCTCGACCCCCTTGCTAATTCTCAGGCGTCGAATTTGGTATCGGTAGACCCGGACCTAAAGACGAGGATGGTGTTTCACACCTGCGACATCATGAAAGTGACAGACGAGCTGAAACAGTACGAGGTTGTGTTTTTGGCAGCTCTGGTAGGGATGGAGAAAGAGGAGAAATTGAGAGTGATTGAGCATTTGTCTGAGTTCATGTCAGAAGGGGCTTATTTGATGTGTGGAGACTTCGACTTTGTTGAGGAACATCCATGGAGAGGAGCAAGGTTATAA 741 47.91 MVCEEEALIQKVCDLYEQISCLESLKPCKHVDTLFTQLVLTCMPPTSPHFHINSLSKPLQLMRSNLIRLCAQAESLLESHFSDLLAKFDSPLHHLHLFPYFSNYLKLSLLEFSILRRHCPALPSAVAFVGSGPLPLTSIVLATRHLTSTAFHNYDLDPLANSQASNLVSVDPDLKTRMVFHTCDIMKVTDELKQYEVVFLAALVGMEKEEKLRVIEHLSEFMSEGAYLMCGDFDFVEEHPWRGARL 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3447708 3449577 - Tan0020180.2 Tan09g0076 762419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0076 246 Pfam Nicotianamine synthase protein 5 230 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Tan09g0076 246 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 246 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Tan09g0076 246 PANTHER NICOTIANAMINE SYNTHASE 3 5 230 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Tan09g0076 246 Gene3D Vaccinia Virus protein VP39 7 231 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0076 Tan-Chr9:3447708 Tan09g1670 Tan-Chr9:68348733 5.70E-55 dispersed
Tan09g0075 Tan-Chr9:3447708 Tan09g0076 Tan-Chr9:3447708 6.00E-127 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0076 K05953 - csv:101218907 405.216