Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0122 ATGAGTCAGACAGAAGTATCAAGGATTAAGCCCCCTCTCGTTCCGCTCGCTACTTTGATTGGTCGCGAGCTGAGGAACGAGAAGGTTGAGAAACCTTTTGTGAAGTATGGACAGGCTGCTTTGGCAAAGAAAGGAGAGGACTACTTTCTGATAAAACTGGATTGCCAGCGCATTCCTGGAAACCCTTCAACTGCATTTTCAGTCTTTGCGATTTTTGATGGGCATAATGGCATATCAGCCGCTATCTTTGCAAAGGAACATTTACTGGGTAATGTCTTAAGTGCAATTCCTCAAGGGGCCAGTCGAGAAAAATGGCTACAAGCCCTTCCTCGAGCATTAGTTGCTGGTTTTGTCAAAACTGACATAGAGTTTCAGCAAAAAGGGGAAACTTCTGGAACTACTGTTACATTTGTTGTGATTGATGGGTGGACTGTTACAGTGGCATCCGTGGGAGATTCACGGTGCATATTAGACACCCAAGGAGGTGTTGTTTCTCTATTGACAGTTGATCATAGGCTGGAGGAAAATGAGGAAGAGAGGGAACGTGTAACTGCAAGTGGTGGTGAGGTTGGGAGGCTCAATGTTTTTGGCGGCAATGAGGTCGGTCCTCTCCGCTGCTGGCCTGGTGGCTTATGTCTTTCTAGGTCCATTGGTGATACAGATGTAGGAGAATATATTGTCCCAATACCACATGTTAAGCAAGTGAAGCTTTCTAATGCTGGCGGAAGACTAATAATCGCTTCTGATGGTATATGGGATGCTTTATCGTCTGATATGGCTGCAAAGTCTTGTCGAGGTTTGCCTGCAGATCTTGCTGCTAAACTAGTTGTGAAGGAGGCTTTGCGGTCAAGGGGGTTGAAGGATGATACAACTTGCTTAGTTGTTGATATTATACCATCGGAGCAACCTATATTATTACCACCAACTCCAAGGAAGAAGCAAAATGTACTTACCTCACTCTTTGGGAAGAAATATCAAAACTCTTTGGGGAAATCTGCAAATAAACTTTCTGCTGTTGGAGTTGTGGAGGAATTGTTCGAAGAGGGTTCGGCTATGCTTGCTGAAAGGCTAGGAAAAGATTTTCCTTCAGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGTCAAGTGGATCAACCCCCAAACGAAAATTTGTCGATGAATTCGGGGCCTTTCTTTTCGCCGTCGTCAAAGCCATGGGAAGGTCCGTTCCTCTGTGCAACTTGTCGAAGAAAGAAAGACGCCATGGAAGGAAAAAGGCCGACAAAACCTACAATAACTGTCTAG 1287 44.91 MSQTEVSRIKPPLVPLATLIGRELRNEKVEKPFVKYGQAALAKKGEDYFLIKLDCQRIPGNPSTAFSVFAIFDGHNGISAAIFAKEHLLGNVLSAIPQGASREKWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPADLAAKLVVKEALRSRGLKDDTTCLVVDIIPSEQPILLPPTPRKKQNVLTSLFGKKYQNSLGKSANKLSAVGVVEELFEEGSAMLAERLGKDFPSDPNSGIFKCAVCQVDQPPNENLSMNSGPFFSPSSKPWEGPFLCATCRRKKDAMEGKRPTKPTITV 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5771649 5775890 + Tan0011256.2 Tan09g0122 762465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0122 428 ProSiteProfiles PPM-type phosphatase domain profile. 32 297 IPR001932 -
Tan09g0122 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Tan09g0122 428 SMART PP2C_SIG_2 51 297 IPR001932 -
Tan09g0122 428 SMART PP2C_4 23 295 IPR001932 -
Tan09g0122 428 Pfam Protein phosphatase 2C 62 266 IPR001932 -
Tan09g0122 428 Gene3D - 38 302 IPR036457 -
Tan09g0122 428 SUPERFAMILY PP2C-like 43 297 IPR036457 -
Tan09g0122 428 PANTHER PROTEIN PHOSPHATASE 36 296 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan09g0122 428 CDD PP2Cc 43 297 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0122 Tan-Chr9:5771649 Tan08g1276 Tan-Chr8:42487673 6.00E-20 dispersed
Tan09g0121 Tan-Chr9:5771649 Tan09g0122 Tan-Chr9:5771649 4.50E-249 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0122 - - - 0.0