Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0127 ATGGAGCATTTGTTCTTGAAGTTCAATGAACTAACAAAGTCACTTAGAACTAAAAAATGGAGAAACTCTGAAAATGCTTCTGTTGTGAGTGGAAGAGAAGAAGCAGAAGCAATGGCAAAGTCTGCAAAGAAGAAGAATATGATCATCCATGGTTCTGGGAGTATAAATATTGACGGTTCGAGCAACTTCGTTTCGAGTTTTTCAAAGAGGGGCGAGAAAGGAGTCAATCAGGACTGCTGCATTGTGTGGGAGGAATTTGGGTGTCAAAAGGATATGATATTTTGTGGGGTTTTTGATGGCCATGGACCATGGGGCCATTTTGTTGCAAAAAAGGTTAGAAAGTCAATGCCAACTGCTCTGCTTTGCAATTGGCAAGAAGCACTTGTTCAAACTGCTCTTCACCCACATTTGGAACTCAACTCAGGTAAAGCACATCTACAGTTCAATTTATGGGAGCATTCTTATATAGAAGCCTGTGCTACTGTCGATCAAGAACTCGAGCAACACCGTAAAATCGACACGTTTCACAGTGGAACAACGGCCCTTTCGATCGTCCGAAAAGGTGATGTAATTGTTATTGCAAACATTGGCGACTCCCGGGCTGTGTTGGCTACAACTTCTGATGATGGAAACTCGGTACCGTTACCAATTCAGCTAACTATCGATTTCAAGCCGAATCTACCTCAAGAGGCTGAGAGGATAGCACAATGCAATGGGAGGGTTTTCTGCTTGCAAGATGAACCAGGGACTCACCGTCTCTGGCTTCCGAATGGGGAAACACCGGGGCTGTCGATGTCGAGATCGTTCGGTGATTTTTGTGTTAAGAGATTTGGACTTATTTCTGTGCCTGATGTAACACAAAGAACTGTAACCAGCAAAGACTTGTTTGTTGTACTTGCAACTGATGGGATATGGGACGTGGTCTCGAATCAAGAAGCGGTGCAGATCGTCCATTCAACCGTAGATAGAAAAAAATCAGCTCGGCAGTTGGTTGATTATGCTACACGAGCATGGAAGCGAAAGAGGCCGGGAATTGCAGCGGATGACATGTCGGTTATCGTCCTCTTCCTCCATTCTTCACCTTTGCATCAACAAGCTTTTGTTGTAGCTCCATTGTAA 1119 44.15 MEHLFLKFNELTKSLRTKKWRNSENASVVSGREEAEAMAKSAKKKNMIIHGSGSINIDGSSNFVSSFSKRGEKGVNQDCCIVWEEFGCQKDMIFCGVFDGHGPWGHFVAKKVRKSMPTALLCNWQEALVQTALHPHLELNSGKAHLQFNLWEHSYIEACATVDQELEQHRKIDTFHSGTTALSIVRKGDVIVIANIGDSRAVLATTSDDGNSVPLPIQLTIDFKPNLPQEAERIAQCNGRVFCLQDEPGTHRLWLPNGETPGLSMSRSFGDFCVKRFGLISVPDVTQRTVTSKDLFVVLATDGIWDVVSNQEAVQIVHSTVDRKKSARQLVDYATRAWKRKRPGIAADDMSVIVLFLHSSPLHQQAFVVAPL 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5980383 5984387 - Tan0017286.1 Tan09g0127 762470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0127 372 CDD PP2Cc 62 357 IPR001932 -
Tan09g0127 372 PANTHER PROTEIN PHOSPHATASE 41 356 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan09g0127 372 SMART PP2C_4 54 355 IPR001932 -
Tan09g0127 372 SUPERFAMILY PP2C-like 63 358 IPR036457 -
Tan09g0127 372 FunFam Probable protein phosphatase 2C 34 54 359 - -
Tan09g0127 372 Pfam Protein phosphatase 2C 87 336 IPR001932 -
Tan09g0127 372 Gene3D - 56 359 IPR036457 -
Tan09g0127 372 ProSiteProfiles PPM-type phosphatase domain profile. 63 357 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0625 Tan-Chr8:6323195 Tan09g0127 Tan-Chr9:5980383 3.30E-144 dispersed
Tan08g0626 Tan-Chr8:6323195 Tan09g0127 Tan-Chr9:5980383 3.30E-144 dispersed
Tan09g0127 Tan-Chr9:5980383 Tan09g0621 Tan-Chr9:52973373 1.70E-79 dispersed
Tan09g0127 Tan-Chr9:5980383 Tan02g1435 Tan-Chr2:55688458 3.20E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0127 - - - 0.0