Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0149 ATGCATGTCATGTTCAATATGTACAGATCAAATTCAATGGAAGAAGTGCCTAACTTGATTTGTGCAGATATTGAAGACCGAAATTCCTGCATTTCAAACATACAACTTGAATTGGGAAGAAGTGTGAACTCACACCCAAGTTCTGTCTTGAGTGCTGCAATTAGAGCGACTCTTAATGAAGCGAGACGAGCAATAGAGTCTATAACAAAGTTCAGCACGTTCTCGTTTAGCTACCGTGAGGAAATGGCGATTGAGGACTGCAAGGAGCTTCTTGACTTCTCTGTCTCAGAGCTTGCCTGGTCGTTAGCTGAGATGAAAAGGATTCGTACAGGTGAAAATGACGCTCCGGGTGAAGGCAACCTAAAAGCATGGCTGAGTGCTGCTCTCAGCAACCAAGACACATGCCTTGAAGGCTTTGAAGGCACAGACAGGCACATTGTAAGTTTCATCAGAGGGAGTTTGAAGCAAGTTACATTACTCATTAGCAATGTCTTGGCATTGTATACTCAATTACACAGCTCACCATTTCAACCCCCACGGAATGAAACGGCGGAGGAAACCAAAAGTACAGAGTTTCCAGATTGGATGACAAGTAGTGAGCATGAGCTCATGAAATCTCATCCACGTAGCATTCACGTCAACGCAGTTGTGGCTTTGGATGGAAGTGGAGATTTCCGTTCGATCACAGAAGCTGTAAATGAAGCTCCAAATTATAGTAACAGAAGATACATCATATATGTGAAGAAGGGAGTCTACAAAGAAAATATCGACATGAAGCGAAAGAAAACTAACATAATGTTTATTGGAGATGGTATTGGAGAAACGGTGGTGACGGGAAGTCGCAATTTTCTTCAGGGATGGACTACTTTCAGAACTGCAACTGTTGCTGTTTCTGGGAAGGGATTCATAGCAAGAGACATGACATTTCGCAACACCGCTGGACCGGAAAACCATCAAGCAGTGGCACTCCGAGTCGACTCCGATCAATCTGCCTTCTATCGGTGCAGCTTTGAAGGCCATCAAGACACGCTTTACGTTCACTCTCTTCGCCAATTTTACAGGGAATGCAACATATATGGCACCATAGACTACATCTTCGGCAACGGTGCAGCAGTGTTCCAAAAATGCAACATCTACACCAGAGTTCCACTCCCTCTCCAGAAGGTCACGATCACAGCTCAAGGCCGAAAATCCCCGCATCAGAGTACCGGTTTTTCGATCCAAGACAGTTTTATTTATGCAACTCAACCAACATATCTAGGAAGACCATGGAAGCTATATTCAAGGACTGTCTTCTTGAACACTTACATGAGTGGTTTGGTACAACCTAGAGGGTGGCTTGAGTGGTATGGCAATTTTGCATTAGGCACATTGTGGTATGGAGAGTATAAGAATTATGGACCTGGTGCATCCCTTTCGGGTCGGGTCAAATGGCTTGGGTACCACGATATCCGAGATGCTGTTGTGGCTAGGTTGTTCACCTCCGAGCACTTCATCGACGGTCGATCATGGTTGCCGAGGACGGGTATTAAGTTCACACTTGGATTGAGTAATTAA 1557 44.7 MHVMFNMYRSNSMEEVPNLICADIEDRNSCISNIQLELGRSVNSHPSSVLSAAIRATLNEARRAIESITKFSTFSFSYREEMAIEDCKELLDFSVSELAWSLAEMKRIRTGENDAPGEGNLKAWLSAALSNQDTCLEGFEGTDRHIVSFIRGSLKQVTLLISNVLALYTQLHSSPFQPPRNETAEETKSTEFPDWMTSSEHELMKSHPRSIHVNAVVALDGSGDFRSITEAVNEAPNYSNRRYIIYVKKGVYKENIDMKRKKTNIMFIGDGIGETVVTGSRNFLQGWTTFRTATVAVSGKGFIARDMTFRNTAGPENHQAVALRVDSDQSAFYRCSFEGHQDTLYVHSLRQFYRECNIYGTIDYIFGNGAAVFQKCNIYTRVPLPLQKVTITAQGRKSPHQSTGFSIQDSFIYATQPTYLGRPWKLYSRTVFLNTYMSGLVQPRGWLEWYGNFALGTLWYGEYKNYGPGASLSGRVKWLGYHDIRDAVVARLFTSEHFIDGRSWLPRTGIKFTLGLSN 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7600299 7602664 + Tan0006811.1 Tan09g0149 762492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0149 518 Gene3D Invertase/pectin methylesterase inhibitor family protein 18 173 IPR035513 -
Tan09g0149 518 CDD PMEI-like_4 29 171 - -
Tan09g0149 518 PANTHER PECTINESTERASE 17 506 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Tan09g0149 518 NCBIfam pectinesterase inhibitor domain 20 172 IPR006501 GO:0004857(InterPro)
Tan09g0149 518 ProSitePatterns Pectinesterase signature 2. 358 367 IPR033131 -
Tan09g0149 518 Pfam Plant invertase/pectin methylesterase inhibitor 19 167 IPR006501 GO:0004857(InterPro)
Tan09g0149 518 FunFam Pectinesterase 208 516 - -
Tan09g0149 518 Gene3D - 209 516 IPR012334 -
Tan09g0149 518 Pfam Pectinesterase 214 501 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Tan09g0149 518 SUPERFAMILY Pectin lyase-like 213 515 IPR011050 -
Tan09g0149 518 SMART PMEI_2 11 167 IPR006501 GO:0004857(InterPro)
Tan09g0149 518 ProSitePatterns Pectinesterase signature 1. 239 258 IPR018040 -
Tan09g0149 518 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 20 172 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g2262 Tan-Chr8:74117403 Tan09g0149 Tan-Chr9:7600299 1.30E-129 dispersed
Tan09g0149 Tan-Chr9:7600299 Tan10g0389 Tan-Chr10:3069015 4.00E-111 dispersed
Tan11g1758 Tan-Chr11:18114509 Tan09g0149 Tan-Chr9:7600299 1.50E-08 dispersed
Tan09g0149 Tan-Chr9:7600299 Tan09g0150 Tan-Chr9:7607219 2.50E-89 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0149 K01051 - csv:101202977 966.066