Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0150 ATGGGTTACGAAGATGATGATGCTCAGAACAAGAAACGATACGCCATCATCGGTGTGTCGTCAATGTTACTGGTGGCAATGGTGGTGGCAGTGACAGTCGGTGTTAACCTAAACCAAGACGAAACGAGCGATCCAGTCACCGGAAACAAGGCACATGAAATAACTACTTCTATGAAAGCCATTAAAGCCATTTGCCAACCTACTGATTACAAACAAGAGTGTGTTGCTAGCCTTAAATCTGCTGGTAACAACTCTGCGGATCCTAAGGAATTGGTTCAAGCTGGCTTTAAGGTTGCCATGAAATTGATTCAAGCCGCGGCTAATAAATCTGTCACCTTGCAAGAGCTTGAGAAAGATCCTAGAACTTCCAAAGCCCTTGCTGGCTGTAAGGAGCTCATGGATTTTGCCTTTGATGAGCTTAAATACTCCATGGAAAAACTCGGCGAGTTCGATATTACTCATCTCGACGAGATGTTGATCGATATTAAGATCTGGCTCAGCGCCACCATTACTTACCAAGAAACTTGCTTGGATGCATTCGAGAACACAACAGGAAATGCGGCAGAGAAGATGAAGAAGGCATTGAAGACGTCGATGCGATTGAGCAGCAATGGGTTGGCAATGGTGACACAAATCTCCTCCATGTTGACAGATTTGCAAATTCCAGGGATCAGTCGACGACGACTTCTGGAGATTCCAATTCTCGGCCACGACGATTACCCCGAGTGGGCAAACCCTGGGATGCGCCATCTCCTGGCCGCTTCTCCGGGGAAGATCAAGCCAAACATCGTGGTGGCCAAGGATGGAAGTGGGAATTACAAGACCATTCAAGAGGCTCTAGACAGAGTTCCAAAGAGGAAGAACAATCAAACTTTTGTGATTCATATCAAGCAAGGAGTGTACAAGGAATACATTGTCATCAACAAAACCCTCACCCATTTGACATTAATTGGTGATGGCCCCAAAAAGACCATTATCTCCGGAGACAAGAACTTTATTGATGGCACACCCACCTTCAAAACTGCTACCGTTTCTGTGACAGCAGAGCGATTCATGGCTCGAGACATCGGGTTCGAGAACACAGCAGGGCCGACGAAGCATCAAGCAGTGGCATTGCGAGTCCAAGCAGACAAAGTGGTGTTCTTCAACTGTGAAATGCATGGTTACCAAGATACTCTCTACGTACACACCATGCGCCAATTCTACCGCGACTGCACGATCTCCGGCACAATCGACTTCGTGTTCGGGGACGCAGCGGCGGTGTTCCAAACTCGCAACTTCACGTGCGAAAGCTACTCGATCATCCAAAACTCGACATTCAAGCCAGATGCAGATCTGTTGCCAGTGAAAAAACAGTACCCATCATTCTTGGGAAGGCCATGGAAGGAATATTCAAGAACAATCATAATGGAATCATACATTGATGACTTTATTCAGCCAGAAGGATGGCTGCCATGGACTGGCGATTGGGGATTAAAGACTTGCTTCTATTCAGAGTATAACAATTATGGGCCTGGATCAGACAAGGCAAATAGAGTCAGATGGAGAGGAATTAAGACCATTACGCCACAACATGCTTTGGATTTCACTGCAGGAAGGTTCATTTTGGGAGATAGATGGATTAGGGCCACTGGAGTTCCATACGCCTCCCAAGCATGA 1659 46.53 MGYEDDDAQNKKRYAIIGVSSMLLVAMVVAVTVGVNLNQDETSDPVTGNKAHEITTSMKAIKAICQPTDYKQECVASLKSAGNNSADPKELVQAGFKVAMKLIQAAANKSVTLQELEKDPRTSKALAGCKELMDFAFDELKYSMEKLGEFDITHLDEMLIDIKIWLSATITYQETCLDAFENTTGNAAEKMKKALKTSMRLSSNGLAMVTQISSMLTDLQIPGISRRRLLEIPILGHDDYPEWANPGMRHLLAASPGKIKPNIVVAKDGSGNYKTIQEALDRVPKRKNNQTFVIHIKQGVYKEYIVINKTLTHLTLIGDGPKKTIISGDKNFIDGTPTFKTATVSVTAERFMARDIGFENTAGPTKHQAVALRVQADKVVFFNCEMHGYQDTLYVHTMRQFYRDCTISGTIDFVFGDAAAVFQTRNFTCESYSIIQNSTFKPDADLLPVKKQYPSFLGRPWKEYSRTIIMESYIDDFIQPEGWLPWTGDWGLKTCFYSEYNNYGPGSDKANRVRWRGIKTITPQHALDFTAGRFILGDRWIRATGVPYASQA 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7607219 7609116 + Tan0018162.1 Tan09g0150 762493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0150 552 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 213 IPR035513 -
Tan09g0150 552 SMART PMEI_2 56 208 IPR006501 GO:0004857(InterPro)
Tan09g0150 552 PANTHER PECTINESTERASE 13 429 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Tan09g0150 552 FunFam Pectinesterase 57 213 - -
Tan09g0150 552 Gene3D - 256 552 IPR012334 -
Tan09g0150 552 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 213 IPR035513 -
Tan09g0150 552 Pfam Pectinesterase 434 538 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Tan09g0150 552 Pfam Pectinesterase 262 428 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Tan09g0150 552 FunFam Putative pectinesterase 57 259 435 - -
Tan09g0150 552 ProSitePatterns Pectinesterase signature 1. 288 307 IPR018040 -
Tan09g0150 552 NCBIfam pectinesterase inhibitor domain 57 212 IPR006501 GO:0004857(InterPro)
Tan09g0150 552 SUPERFAMILY Pectin lyase-like 260 549 IPR011050 -
Tan09g0150 552 ProSitePatterns Pectinesterase signature 2. 407 416 IPR033131 -
Tan09g0150 552 Pfam Plant invertase/pectin methylesterase inhibitor 59 208 IPR006501 GO:0004857(InterPro)
Tan09g0150 552 CDD PMEI-like_3 63 214 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2699 Tan-Chr6:79431027 Tan09g0150 Tan-Chr9:7607219 9.50E-178 dispersed
Tan09g0150 Tan-Chr9:7607219 Tan10g1033 Tan-Chr10:9186330 1.70E-163 dispersed
Tan09g0149 Tan-Chr9:7600299 Tan09g0150 Tan-Chr9:7607219 2.50E-89 tandem
Tan09g0150 Tan-Chr9:7607219 Tan09g0151 Tan-Chr9:7766987 3.70E-256 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0150 K01051 - csv:101207393 931.398