Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0197 ATGGGTTGTGTTGTGAAGTGCGTTTTCATGATTGTTGTCTTCATGTCGATGCCTTTTCCATCGCAGAACTCCCACATTTTGGTTGCTAACTCACTGTTGAATGCAGCAGAGAGCTTCAATATTAAAGAACTTGAGAGAGTTTCAGGGGAAGATGAAAGTGGAGGAAATGAACCTTTCATTCTGGAGAGAGTCAGAGCTCTACTTGGACTCAAGAGCTTACGATTGGGAAATCAAAGCCCATCAGATCTTTCGCCTTCGCCGTCACCATCGCCGTCTCCATCACCAGCCTCCATTGCTCCATCTCCTGTTCCTGTGGCAGCTCATCGAGTGCACATTCATGAACATTCCCACCCTCATCAGCTTCGCTTGCACAAGAGCCGGCCAGTTTACAAATCTAAAAGACAAGAAGATGCAAGAGAAAGAAGAGTCAGAAAAATTCTTGTTGCAGTTCTTGTGTCTGCAGGAGTCACCATTTTGGTATGCGCTATTGCTGCCTTTTGGGTTTGCAAGAAGTTCAAAAGTCGGAGAGAGGAACCCACAGAGAAGCTTTCTATTAAGAGTGAAACAGGAGAGAAGACAGCTAGACCAAAATCTGGGCTTGATCTGTTCGATCTCAGTATGCTTGGAATGGATGTTGAAGAACAGACGCAAACTTCTGTAAGTGAAAAGGAGTTATCAGTTCATAAAGAGGGGGAAAGGGGCCAAGAGATGTTGGATTCAGAATTTGATAATGTAAGTGTTTCTTCAACCAAGGAAATGATGTATGTTAACAATGAGGAAGTTGATAGAAAGTCAATCCAATGTGTATCTGATGGAGCTGATTCTTCATCTGGGGAGAGAGTGACTCCTGTTAAATCTTGTTCATCTGATGATGAGGAATCATTCCATTCTTGTGGGGATTCCAATTTGTCGAATGTTCGCCTTTCAAATGCATCGGAATCTTCTGCTAATGTGACAACAAATTCTACTTGTTCAGTTCCAATTGTGAACTTATCAACTAAACTGGAAATACAATGTGATGAATCTAACAAACCATTAACTTCTGATCAGTCGCATCTTACCCATTCCCCTTGTAATTCAGAACCTCAAATGCAGATGGTTTCACATTCTGTAGGTTGCCGAAAGAATGTCCCATCTCTATCTCCACCCCCACCGCCACCGCCGCCACCGCCGCCAGTCACTGATCGAAGTTCATTTTCCCTCTCTTCACCCTTTTCAACTGGATCTACTTCCTCTTCTGCATTGTTAAGATCATCGTCTCCTGCAATGTCAGATTCTTCTTCGTTATCTCAAATACCATGGAATGATCTACCCTCACCTCCAAATATTGCTAAACCTTCACTACCATCATCTGCTATTCCTCCACCCCCTTGTCCACCACCCAGTTTGAAACCAAACGCTTACTCTTTCAAAACTCCACCTCCTCCTCCTTCCAAGCTCCCTCAATTCATGGCATTTGGAAAAGAGGGAAATTCGCGGCCAAAACTTAAGCCTCTTCACTGGGACAAAGTAAGAGCTGCACCAGATCGATCAATGGTGTGGGACAAGCTAAGATGGAGTTCATTTGAGCTAGATGAAGAAATGATTGAATCACTATTTGGCTACAATCAACATGATTCAATGAAGAATGGCGATGCTAGCAACAAAAGCCCTTCTCCAAGCAAGCATATACTAGAGGCAAAGAGACTTCAGAACCTAACCATACTCTTAAAAGCCCTGAATGTCTCAACAGAACAAGTTTGTGAAGCCATAGAACAAGGGACCGGGTTACGTTTAAGACAACTTGAAGCATTGGTTAAGATGGTACCAACCCAGGAAGAAGAGGCCAAATTGTTTGGCTATGAAGGAGACATCGGTGAATTGGGGTGTACAGAGAATTTTGTCATAGCAATTCTGAGAATACCATTCGCCTTTCAGCGAGTAGAAGCGATGCTTTACAGAGAAACTTTTGAAGATGAAGTGAACCATCTCCGAAATTCGTTTTCAATGCTAGAGGAGGCCTGCAAGGAACTAAGATCCAGCAGGCTCTTCCTGAAACTACTGGAAGCCGTGCTCAAAACAGGGAACCGAATGAACGTCGGAACAAGCAGAGGAGGCGCAAGAGCATTCAAACTAGACGCACTCCTAAAACTCTCCGACGTCAAAGGAACCGACGGCAAAACGTCCCTACTCCACTTTGTCGTGCAAGAAATGATCCGATCAGAAGGAATCCGAGTCTCCGGTAGCATAATGGGGAAAATCAGCCAGAAAAACAAATCGAGAACAATCGAAGAAAGAGAAAACGATTACCGAAGAATGGGATTGGATCTCGTCTCCGGATTAAGCACCGAATTACACAACGTGAAGCGAGCGGCGACGATCGATCTGAAAGTTCTCGCGAGCTCGACAGCGAATCTGAACGACGGAATGGCGAAATTGCAACAACTGGTGTTGAAGGAGCTGTGTTTGGATGAACGGAGCGGGAACTTCGTGGGCGCCATGAAAGGGTTCTTGAGTTACGTGAAGAAGACGATGGAGGAGGTGAGGAAGGACGAAGAAGGGGTAATGGGAAGCGTGAGAGAGATCACAGAGTACTTCCATGGAAATGTGAGCAAAGAGGAGACGAATCCGCTGAGGATTTTTGTGATTGTGAGAGATTTTTTGGGAATGTTGGACAATGTGTGTAAGAGCTTCAAGATTGGAAGTTGA 2688 44.53 MGCVVKCVFMIVVFMSMPFPSQNSHILVANSLLNAAESFNIKELERVSGEDESGGNEPFILERVRALLGLKSLRLGNQSPSDLSPSPSPSPSPSPASIAPSPVPVAAHRVHIHEHSHPHQLRLHKSRPVYKSKRQEDARERRVRKILVAVLVSAGVTILVCAIAAFWVCKKFKSRREEPTEKLSIKSETGEKTARPKSGLDLFDLSMLGMDVEEQTQTSVSEKELSVHKEGERGQEMLDSEFDNVSVSSTKEMMYVNNEEVDRKSIQCVSDGADSSSGERVTPVKSCSSDDEESFHSCGDSNLSNVRLSNASESSANVTTNSTCSVPIVNLSTKLEIQCDESNKPLTSDQSHLTHSPCNSEPQMQMVSHSVGCRKNVPSLSPPPPPPPPPPPVTDRSSFSLSSPFSTGSTSSSALLRSSSPAMSDSSSLSQIPWNDLPSPPNIAKPSLPSSAIPPPPCPPPSLKPNAYSFKTPPPPPSKLPQFMAFGKEGNSRPKLKPLHWDKVRAAPDRSMVWDKLRWSSFELDEEMIESLFGYNQHDSMKNGDASNKSPSPSKHILEAKRLQNLTILLKALNVSTEQVCEAIEQGTGLRLRQLEALVKMVPTQEEEAKLFGYEGDIGELGCTENFVIAILRIPFAFQRVEAMLYRETFEDEVNHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGARAFKLDALLKLSDVKGTDGKTSLLHFVVQEMIRSEGIRVSGSIMGKISQKNKSRTIEERENDYRRMGLDLVSGLSTELHNVKRAATIDLKVLASSTANLNDGMAKLQQLVLKELCLDERSGNFVGAMKGFLSYVKKTMEEVRKDEEGVMGSVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDNVCKSFKIGS 895
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10673567 10677099 + Tan0013821.1 Tan09g0197 762540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0197 895 MobiDBLite consensus disorder prediction 78 101 - -
Tan09g0197 895 MobiDBLite consensus disorder prediction 439 481 - -
Tan09g0197 895 MobiDBLite consensus disorder prediction 114 129 - -
Tan09g0197 895 MobiDBLite consensus disorder prediction 343 375 - -
Tan09g0197 895 MobiDBLite consensus disorder prediction 378 395 - -
Tan09g0197 895 SUPERFAMILY Formin homology 2 domain (FH2 domain) 499 889 - -
Tan09g0197 895 Gene3D Formin, FH2 domain 483 892 IPR042201 -
Tan09g0197 895 ProSiteProfiles Formin homology-2 (FH2) domain profile. 486 895 IPR015425 -
Tan09g0197 895 SMART it6_source 486 893 IPR015425 -
Tan09g0197 895 MobiDBLite consensus disorder prediction 114 136 - -
Tan09g0197 895 PANTHER FORMIN-RELATED 61 891 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Tan09g0197 895 MobiDBLite consensus disorder prediction 343 494 - -
Tan09g0197 895 MobiDBLite consensus disorder prediction 396 437 - -
Tan09g0197 895 Coils Coil 647 667 - -
Tan09g0197 895 MobiDBLite consensus disorder prediction 178 197 - -
Tan09g0197 895 MobiDBLite consensus disorder prediction 269 302 - -
Tan09g0197 895 Pfam Formin Homology 2 Domain 488 884 IPR015425 -
Tan09g0197 895 MobiDBLite consensus disorder prediction 84 100 - -
Tan09g0197 895 MobiDBLite consensus disorder prediction 269 284 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1167 Tan-Chr4:10916302 Tan09g0197 Tan-Chr9:10673567 7.40E-83 dispersed
Tan07g2065 Tan-Chr7:72130335 Tan09g0197 Tan-Chr9:10673567 6.60E-100 dispersed
Tan09g0197 Tan-Chr9:10673567 Tan01g4501 Tan-Chr1:110637190 6.80E-98 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0197 K28090 - csv:101208374 1343.95