Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0225 ATGGCACTCTCTCTCTACTTTCTCAAATCTTCCGCTCTTTCTCTAACCATTCTCTCTGTTTTCATCTTCTTCATTCTCTTCACTCCCAATCGCTCGCCGGAATCCGCATCCAGAAGGTCCCTCATAGCCGCCGGCGACTCCAATTCCAGTGCTGCCTCTTCGATCCCATCTTGTTCCTCGATTGAATCTCACTCCGATGGCCTCGTTAACTACTCGTATTTCCATTTCTGCTTCTTTGATCAAAACCCATCTCTCTCTGTCCCTTTTCTCACTCTTCTTCTTCTCCTCCACTTCTACATCCTCATTAAAACCGCCCAGGATCACTTCTCCATTGTCACTTCCAAGCTCGCCTTTCACCTCAACTTGTCCCCGAGCATGGCCGCCGTGACGCTCTTGGCTTTGGGCAATGGCGCTCCCGATGTGTTCGCATCTGTTGCCGCGGTTCGTGGTGGGCAATATCGAACTGGGTTCGGTGCAATTCTCTCTGCGGGCACTTTTGTCTCTGCTTTTGTGGTTGGATTTGTGGCCATTTATGCTGCTCCGTTTTCGGTGAATCCGGCGCAGTTTGTGAGGGATGTGCTGTTTTATTTGACTGCGGCATTGTTCTTGTTCTATGTGTATCTTAGTGCAGAGATTTTCTTGTGGCAAGCTGTTGGATTTGTTGGATTCTATCTGTTTTTTGTTGGGTTTGTGTTTTGGATGGATTTTAGAATGGGGAGTGGGAAAGCTAGGAGTATGGACGATATGGAAGTGGCTAGAGAAGCTGAGGTCTACCATGGTGAGGTGCCTGAAGACTGTGACATTGGAGAATGCTACAGAAATGTGGATGAAGGAAAAACCAATTTTGGATTTTTGGAAGCTCTTGGAATGATCCCAAAAGCATGGAAAGCTCCTGTCTCGTTTCTTCTGAAGCTCACCATTCCCCAACCTGCACCTTCCAAATGGAGCAGATTCTTTACATCCGCGAATATTTCTCTCTGTCCTGTCACCCTTCTATATGCCTGTAATTCATTCATTCCTTTTAACCATCCCATTGCTTTCCTCTTACCGCATGCACATTTACCTCTTTGGTTTGTAGTACTCTTAGCAAGCTCCTCTCTTGCAATTCTTCACTTTGTCATTGAAACTGAGCCCCCCAAAACCGAGCAAGTCCCTGTGGTGCTTGCAGCATTTGTCATGAGTGTATTTTGGATTTCAACCACTGCTGGGGAACTGCTGAACTGCCTTGCAGCTCTCGGGGTGCTTCTCAAACTTCCGCCAGCCCTACTCGGGCTCACCGTCCTTGCCTGGGGAAATTCGGTTGGGGATCTTGTGGCTGATGTTGCTCTTGCAAAAGCAGGCCAGCCCTTGCTGGCTATGGCTGGATGCTTTGCAGGGCCAATGTTTAACATGCTTGTCGGGCTTGGAACAGCTTTGGTTATGCAAACAACAAACAATTATCCAGAGGCCTATCAGCTTCAATTTCATATTGGAATTGTGATTGCATTCGTATTCCTACTTTTCAGCCTGATGGGTTCCCTACTTGTAATTATTTGGTGCAGATTTCGGGTGCCTCGGTTTTGGGGATTCTGCCTTGTTGTGCTCTACATTGTTTTCATGGCTACCAGCTTACTGATGGCCAAGTTTTCTCCATGA 1635 47.28 MALSLYFLKSSALSLTILSVFIFFILFTPNRSPESASRRSLIAAGDSNSSAASSIPSCSSIESHSDGLVNYSYFHFCFFDQNPSLSVPFLTLLLLLHFYILIKTAQDHFSIVTSKLAFHLNLSPSMAAVTLLALGNGAPDVFASVAAVRGGQYRTGFGAILSAGTFVSAFVVGFVAIYAAPFSVNPAQFVRDVLFYLTAALFLFYVYLSAEIFLWQAVGFVGFYLFFVGFVFWMDFRMGSGKARSMDDMEVAREAEVYHGEVPEDCDIGECYRNVDEGKTNFGFLEALGMIPKAWKAPVSFLLKLTIPQPAPSKWSRFFTSANISLCPVTLLYACNSFIPFNHPIAFLLPHAHLPLWFVVLLASSSLAILHFVIETEPPKTEQVPVVLAAFVMSVFWISTTAGELLNCLAALGVLLKLPPALLGLTVLAWGNSVGDLVADVALAKAGQPLLAMAGCFAGPMFNMLVGLGTALVMQTTNNYPEAYQLQFHIGIVIAFVFLLFSLMGSLLVIIWCRFRVPRFWGFCLVVLYIVFMATSLLMAKFSP 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14017848 14028424 + Tan0002927.1 Tan09g0225 762568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0225 544 Gene3D - 122 248 IPR044880 -
Tan09g0225 544 Gene3D - 320 537 IPR044880 -
Tan09g0225 544 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 57 541 IPR051359 GO:0006812(PANTHER)|GO:0008324(PANTHER)|GO:0016020(PANTHER)
Tan09g0225 544 Pfam Sodium/calcium exchanger protein 92 233 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan09g0225 544 Pfam Sodium/calcium exchanger protein 388 537 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0225 Tan-Chr9:14017848 Tan10g1666 Tan-Chr10:35608903 1.90E-47 dispersed
Tan09g0225 Tan-Chr9:14017848 Tan09g0226 Tan-Chr9:14017848 1.90E-300 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0225 K13754 - csv:101209909 871.692