Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0259 ATGGAGGTTAAGAATTCAACTCTTCCTCCATCACCACCAAAATACCACCACATTCACAACCACAACTATTCCAATATTCATCACCAACACAATGCCATTTTCAGCTCCAACTCCTTCCTCATCATCATTGCCTCCATAATCTCCATCATCATTCTTCTCGCCATCTTCCTCCTCATCTTCATGCTCCACCGCCTCAAATCCCCTTCAAACCCCGCCTCCTCACAATCTCCCACCATATTCATCCCTCACACAGCCATCCATTTCGACTCAAGCCCAGAACTCAAAGCGGGTGGCTGCTTGTATGGAGGCAATTCGGGGAGGATTCCTCAGTACAGAATCAGGGGAGTTCAAGTTTTCACTTACAAGGAGCTGGAATTGGCCACTCGCAATTTCAGTGAAGCCAATGTCGTTGGAAATGGAAGATTTGGGATTGTCTACAGAGGGGTTCTTTGTGATGGAGCTGTGGTTGCTGTTAAAATGCTCCACAGAGATGGCAAGCAGAGGGAACGTGCTTTCAGGATCGAGGTGGATTTGCTAAGCCGCTTGCACTCTCCTTGTTTGGTGGAGTTGCTTGGCTACTGCGCTGACCAACACCATAGGCTTCTGATATTTGAATTTATGCACAATGGTACTCTCCATCATCATCTGCATAATCCCAACAGTGAATCTCGGCCATTGGATTGGAATACTAGATTAAGGATAGCCCTTGATTGTGCCAAGGCACTTGAGTTCCTCCATGAGCATGCAGTTCCATCTGTTATCCATAGAAACTTCAAGTGCACCAATGTTCTACTGGATCAGGATTTCCGAGCCAAGGTGTCCGATTTCGGTTCGGCAAAGATGGGATCTGATAAGATCAACGGTCAAATATCTACACAAGTTCTCGGAACCACGGGATATCTTGCACCAGAGTATGCTTCAACAGGTAAACTCACAACAAAGTCAGATGTATACAGCTATGGTGTTGTGCTGCTGGAGCTTTTGACCGGTCGAGTGCCAGTCGATATCAAGCGGCCACAAGGCGAGCATGTTCTTGTCTCATGGGCTCTCCCAAGGCTAACTAATAGAGAAAAAGTAGAGAAAATGATTGACCCAGCCATTCAAGGAAAATACTCAAAGAAGGATTTAATTCAGGTAGCAGCCATTGCAGCAATGTGTGTGCAGCCCGAAGCCGACTACCGACCTCTGATGACCGATGTCGTGCAGTCATTGGTTCCTCTAGTTAAGAACCCGTCGTCGTCGTCTAGATTCTTCAACTGA 1260 46.75 MEVKNSTLPPSPPKYHHIHNHNYSNIHHQHNAIFSSNSFLIIIASIISIIILLAIFLLIFMLHRLKSPSNPASSQSPTIFIPHTAIHFDSSPELKAGGCLYGGNSGRIPQYRIRGVQVFTYKELELATRNFSEANVVGNGRFGIVYRGVLCDGAVVAVKMLHRDGKQRERAFRIEVDLLSRLHSPCLVELLGYCADQHHRLLIFEFMHNGTLHHHLHNPNSESRPLDWNTRLRIALDCAKALEFLHEHAVPSVIHRNFKCTNVLLDQDFRAKVSDFGSAKMGSDKINGQISTQVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPQGEHVLVSWALPRLTNREKVEKMIDPAIQGKYSKKDLIQVAAIAAMCVQPEADYRPLMTDVVQSLVPLVKNPSSSSRFFN 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22595957 22599254 + Tan0007471.1 Tan09g0259 762602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0259 419 ProSiteProfiles Protein kinase domain profile. 131 408 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0259 419 Gene3D Transferase(Phosphotransferase) domain 1 207 416 - -
Tan09g0259 419 FunFam Putative LRR receptor-like serine/threonine-protein kinase 108 206 - -
Tan09g0259 419 Gene3D Phosphorylase Kinase; domain 1 104 206 - -
Tan09g0259 419 FunFam Receptor-like serine/threonine-protein kinase ALE2 207 418 - -
Tan09g0259 419 CDD STKc_IRAK 137 407 - -
Tan09g0259 419 Pfam Protein tyrosine and serine/threonine kinase 135 404 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0259 419 ProSitePatterns Protein kinases ATP-binding region signature. 137 159 IPR017441 GO:0005524(InterPro)
Tan09g0259 419 PANTHER OS01G0750732 PROTEIN 6 409 IPR050885 -
Tan09g0259 419 SUPERFAMILY Protein kinase-like (PK-like) 109 404 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0177 Tan-Chr2:1551200 Tan09g0259 Tan-Chr9:22595957 1.80E-97 dispersed
Tan02g0178 Tan-Chr2:1551200 Tan09g0259 Tan-Chr9:22595957 1.80E-97 dispersed
Tan06g0459 Tan-Chr6:3328473 Tan09g0259 Tan-Chr9:22595957 5.50E-72 dispersed
Tan09g0259 Tan-Chr9:22595957 Tan09g0261 Tan-Chr9:22595957 1.50E-169 dispersed
Tan11g2046 Tan-Chr11:43040410 Tan09g0259 Tan-Chr9:22595957 5.40E-63 dispersed
Tan09g0259 Tan-Chr9:22595957 Tan09g0260 Tan-Chr9:22595957 5.40E-191 tandem
Tan06g1852 Tan-Chr6:45613298 Tan09g0259 Tan-Chr9:22595957 9.80E-27 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68009 PF07714 PK_Tyr_Ser-Thr 1.20E-44 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0259 - - - 0.0