Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0260 ATGATTGCAGAACTCAAAGCGGGTGGCTGCTTGTATGGAGGCAATTCGGGGAGGATTCCTCAGTACAGAATCAGGGGAGTTCAAGTTTTCACTTACAAGGAGCTGGAATTGGCCACTCGCAATTTCAGTGAAGCCAATGTCGTTGGAAATGGAAGATTTGGGATTGTCTACAGAGGGGTTCTTTGTGATGGAGCTGTGGTTGCTGTTAAAATGCTCCACAGAGATGGCAAGCAGAGGGAACGTGCTTTCAGGATCGAGGTGGATTTGCTAAGCCGCTTGCACTCTCCTTGTTTGGTGGAGTTGCTTGGCTACTGCGCTGACCAACACCATAGGCTTCTGATATTTGAATTTATGCACAATGGTACTCTCCATCATCATCTGCATAATCCCAACAGTGAATCTCGGCCATTGGATTGGAATACTAGATTAAGGATAGCCCTTGATTGTGCCAAGGCACTTGAGTTCCTCCATGAGCATGCAGTTCCATCTGTTATCCATAGAAACTTCAAGTGCACCAATGTTCTACTGGATCAGGATTTCCGAGCCAAGGTGTCCGATTTCGGTTCGGCAAAGATGGGATCTGATAAGATCAACGGTCAAATATCTACACAAGTTCTCGGAACCACGGGATATCTTGCACCAGAGTATGCTTCAACAGGTAAACTCACAACAAAGTCAGATGTATACAGCTATGGTGTTGTGCTGCTGGAGCTTTTGACCGGTCGAGTGCCAGTCGATATCAAGCGGCCACAAGGCGAGCATGTTCTTGTCTCATGGGCTCTCCCAAGGCTAACTAATAGAGAAAAAGTAGAGAAAATGATTGACCCAGCCATTCAAGGAAAATACTCAAAGAAGGATTTAATTCAGGTAGCAGCCATTGCAGCAATGTGTGTGCAGCCCGAAGCCGACTACCGACCTCTGATGACCGATGTCGTGCAGTCATTGGTTCCTCTAGTTAAGAACCCGTCGTCGTCGTCTAGATTCTTCAACTGA 993 46.73 MIAELKAGGCLYGGNSGRIPQYRIRGVQVFTYKELELATRNFSEANVVGNGRFGIVYRGVLCDGAVVAVKMLHRDGKQRERAFRIEVDLLSRLHSPCLVELLGYCADQHHRLLIFEFMHNGTLHHHLHNPNSESRPLDWNTRLRIALDCAKALEFLHEHAVPSVIHRNFKCTNVLLDQDFRAKVSDFGSAKMGSDKINGQISTQVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPQGEHVLVSWALPRLTNREKVEKMIDPAIQGKYSKKDLIQVAAIAAMCVQPEADYRPLMTDVVQSLVPLVKNPSSSSRFFN 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22595957 22599254 + Tan0007471.2 Tan09g0260 762603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0260 330 ProSiteProfiles Protein kinase domain profile. 42 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0260 330 Gene3D Transferase(Phosphotransferase) domain 1 118 327 - -
Tan09g0260 330 FunFam Putative LRR receptor-like serine/threonine-protein kinase 19 117 - -
Tan09g0260 330 ProSitePatterns Protein kinases ATP-binding region signature. 48 70 IPR017441 GO:0005524(InterPro)
Tan09g0260 330 CDD STKc_IRAK 48 318 - -
Tan09g0260 330 Pfam Protein tyrosine and serine/threonine kinase 46 315 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0260 330 FunFam Receptor-like serine/threonine-protein kinase ALE2 118 329 - -
Tan09g0260 330 SUPERFAMILY Protein kinase-like (PK-like) 20 315 IPR011009 -
Tan09g0260 330 Gene3D Phosphorylase Kinase; domain 1 15 117 - -
Tan09g0260 330 PANTHER OS01G0750732 PROTEIN 18 320 IPR050885 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0260 Tan-Chr9:22595957 Tan09g1144 Tan-Chr9:63759171 6.60E-83 dispersed
Tan09g0259 Tan-Chr9:22595957 Tan09g0260 Tan-Chr9:22595957 5.40E-191 tandem
Tan09g0260 Tan-Chr9:22595957 Tan09g0261 Tan-Chr9:22595957 8.50E-123 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68010 PF07714 PK_Tyr_Ser-Thr 5.40E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0260 - - - 0.0