Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0363 ATGGGGTGTTTGGTTAGCCGAGAGGCGTCTTCTAGAAGTGTAGAACCCCCTGTAGACAACGGGAAGAGGAATCAAATTACCGAGTCTCGTGTCCAAGTCGAGCGTGTTCAGGAAAAAGAACTAGAGTATGTTAGTGCTAATGTAGAGGAGCATGTAAATGTGAGCAAGGAGGAGGAGCAGAAGGCTGATGGGGGTCAGGATCGCCCACGGGCAGAGCGGAGAAAGAGGAAGGTTCCCAAGCCTGCTAACTTGCCAAACCATTCCCAGGGAGAGCAAGTTGCTGCTGGGTGGCCATCTTGGCTCACAGCAGTTTGTGGGGAGGCTCTCAATGGTTGGATTCCAAGGAAGGCTGATACATTTGAAAAGATTGATAAGATTGGACAAGGAACGTATAGCAATGTGTATAAAGCTAAAGATATACTTACAGGTAAAATTGTTGCACTGAAGAAGGTTAGATTTGACAATCTGGAACCCGAAAGTGTGAAGTTTATGGCTAGAGAGATTCTCATCCTCAGGAGATTAAATCACGACAATGTTGTGAAATTGGAGGGGTTGGTTACATCACGGATGTCTTGTAGTTTATACTTGGTGTTTGAGTACATGGAACATGATTTAGCTGGTCTTGCTGCTAATCCATCAATCAAGTTTACAGAATCTCAGGTTAAATGTTTCATGCAACAACTGCTATCTGGACTGGAACACTGTCACAATCGTCGTGTGCTTCACCGTGACATTAAAGGATCTAATCTTCTCATTGATAGTGGGGGAGTGCTTAAGATTGCTGACTTTGGATTGGCTTCTTTCTTTGACCCAAATCATAAGCACCCAATGACTAGTCGGGTAGTTACCTTATGGTATCGACCTCCTGAACTTCTTCTTGGAGCAACTGATTATGGAGTAGGTGTAGACCTCTGGAGTGCTGGGTGTATACTGGCTGAGTTATTAGCTGGGAGGCCTATTATGCCTGGTCGTACAGAGGTAGAGCAACTACACAAGATATACAAGCTTTGTGGCTCCCCTTCAGATGAATATTGGAAAAGAGCAAAACTGCCAAATGCAACCTTATTTAAGCCCAGAGAACCTTATAAAAGATGTATAAAGGAGACATTTAAAGATTTCCCTCCATCATCACTGCCCCTTATAGAAACGCTTCTTGCAATTGATCCAGTAGAACGAAAGACAGCAACAGATGCATTAAATAGTGAGTTCTTCATGACAGAGCCTTTAGCTTGCAAACCCTCCAACCTCCCGAAATATCCTCCCAGTAAGGAGATGGATGCTAGAAGACGGGATGATGAAGCTCGGAGATTAAGAGCAGCTAATAAAGCCCAGGGAGATGGAGCAAAGAAAACACGCACACGTGTTAGGGCTATTCCAGCTCCTGAAGCCAATGCCGAAATACAAACAAATATCGACAGAAGGCGCTTAATTACACATGCAAATGCTAAGAGCAAAAGCGAAAAGTTCCCCCCACCACACCAGGATGGAGCGCTTGGCTTTACGCTAGGATATTCGCGTCATATCGACCCATCTGGTGTTCCTCCCGACATACCATTGAGCTCGACTTTGTTCACTTACTCAAAGGAGCCAGTTCAAGCCTGGTCTGGTCCACTGGTCCCTGGTGCTGGCACTGATGCTCCTCCTAGGCAGAAGAAGCATGTGGGAGGTAAAGGCAAGAAAATCATGGTCTAA 1692 45.33 MGCLVSREASSRSVEPPVDNGKRNQITESRVQVERVQEKELEYVSANVEEHVNVSKEEEQKADGGQDRPRAERRKRKVPKPANLPNHSQGEQVAAGWPSWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDILTGKIVALKKVRFDNLEPESVKFMAREILILRRLNHDNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAANPSIKFTESQVKCFMQQLLSGLEHCHNRRVLHRDIKGSNLLIDSGGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIYKLCGSPSDEYWKRAKLPNATLFKPREPYKRCIKETFKDFPPSSLPLIETLLAIDPVERKTATDALNSEFFMTEPLACKPSNLPKYPPSKEMDARRRDDEARRLRAANKAQGDGAKKTRTRVRAIPAPEANAEIQTNIDRRRLITHANAKSKSEKFPPPHQDGALGFTLGYSRHIDPSGVPPDIPLSSTLFTYSKEPVQAWSGPLVPGAGTDAPPRQKKHVGGKGKKIMV 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34041110 34068582 - Tan0016517.1 Tan09g0363 762706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0363 563 MobiDBLite consensus disorder prediction 414 453 - -
Tan09g0363 563 Gene3D Phosphorylase Kinase; domain 1 107 202 - -
Tan09g0363 563 PANTHER CELL DIVISION PROTEIN KINASE 119 404 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Tan09g0363 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0363 563 SMART serkin_6 120 404 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0363 563 MobiDBLite consensus disorder prediction 47 91 - -
Tan09g0363 563 Gene3D Transferase(Phosphotransferase) domain 1 203 444 - -
Tan09g0363 563 FunFam probable serine/threonine-protein kinase At1g54610 203 444 - -
Tan09g0363 563 Pfam Protein kinase domain 120 404 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0363 563 ProSiteProfiles Protein kinase domain profile. 120 404 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0363 563 MobiDBLite consensus disorder prediction 422 453 - -
Tan09g0363 563 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524(InterPro)
Tan09g0363 563 CDD STKc_CDK9_like 120 404 - -
Tan09g0363 563 SUPERFAMILY Protein kinase-like (PK-like) 114 408 IPR011009 -
Tan09g0363 563 FunFam probable serine/threonine-protein kinase At1g54610 107 202 - -
Tan09g0363 563 MobiDBLite consensus disorder prediction 535 563 - -
Tan09g0363 563 MobiDBLite consensus disorder prediction 47 72 - -
Tan09g0363 563 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0478 Tan-Chr8:4586059 Tan09g0363 Tan-Chr9:34041110 2.10E-238 dispersed
Tan08g0479 Tan-Chr8:4586059 Tan09g0363 Tan-Chr9:34041110 6.60E-188 dispersed
Tan09g0363 Tan-Chr9:34041110 Tan10g0948 Tan-Chr10:8276276 2.80E-235 dispersed
Tan09g0363 Tan-Chr9:34041110 Tan09g0364 Tan-Chr9:34041110 7.20E-255 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68014 PF00069 Pkinase 1.10E-67 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0363 K08819 - csv:101215893 1091.26