Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g0364 | ATGGGGTGTTTGGTTAGCCGAGAGGCGTCTTCTAGAAGTGTAGAACCCCCTGTAGACAACGGGAAGAGGAATCAAATTACCGAGTCTCGTGTCCAAGTCGAGCGTGTTCAGGAAAAAGAACTAGAGTATGTTAGTGCTAATGTAGAGGAGCATGTAAATGTGAGCAAGGAGGAGGAGCAGAAGGCTGATGGGGGTCAGGATCGCCCACGGGCAGAGCGGAGAAAGAGGAAGGTTCCCAAGCCTGCTAACTTGCCAAACCATTCCCAGGGAGAGCAAGTTGCTGCTGGGTGGCCATCTTGGCTCACAGCAGTTTGTGGGGAGGCTCTCAATGGTTGGATTCCAAGGAAGGCTGATACATTTGAAAAGATTGATAAGATTGGACAAGGAACGTATAGCAATGTGTATAAAGCTAAAGATATACTTACAGGTAAAATTGTTGCACTGAAGAAGGTTAGATTTGACAATCTGGAACCCGAAAGTGTGAAGTTTATGGCTAGAGAGATTCTCATCCTCAGGAGATTAAATCACGACAATGTTGTGAAATTGGAGGGGTTGGTTACATCACGGATGTCTTGTAGTTTATACTTGGTGTTTGAGTACATGGAACATGATTTAGCTGGTCTTGCTGCTAATCCATCAATCAAGTTTACAGAATCTCAGGTTAAATGTTTCATGCAACAACTGCTATCTGGACTGGAACACTGTCACAATCGTCGTGTGCTTCACCGTGACATTAAAGGATCTAATCTTCTCATTGATAGTGGGGGAGTGCTTAAGATTGCTGACTTTGGATTGGCTTCTTTCTTTGACCCAAATCATAAGCACCCAATGACTAGTCGGGTAGTTACCTTATGGTATCGACCTCCTGAACTTCTTCTTGGAGCAACTGATTATGGAGTAGGTGTAGACCTCTGGAGTGCTGGGTGTATACTGGCTGAGTTATTAGCTGGGAGGCCTATTATGCCTGGTCGTACAGAGGTAGAGCAACTACACAAGATATACAAGCTTTGTGGCTCCCCTTCAGATGAATATTGGAAAAGAGCAAAACTGCCAAATGCAACCTTATTTAAGCCCAGAGAACCTTATAAAAGATGTATAAAGGAGACATTTAAAGATTTCCCTCCATCATCACTGCCCCTTATAGAAACGCTTCTTGCAATTGATCCAGTAGAACGAAAGACAGCAACAGATGCATTAAATAGTGAGTTCTTCATGACAGAGCCTTTAGCTTGCAAACCCTCCAACCTCCCGAAATATCCTCCCAGTAAGGAGATGGATGCTAGAAGACGGGATGATGAAGCTCGGAGGTATGAATGCCTTGATTTCAGTTTCTGCTCAATATATGCCTGGTTTGTTTTGAGAGCTATTGAGAAATTGGCGCAAGCTATTTTCATGAGGTTGAGATCGTTTCCCTAA | 1416 | 43.86 | MGCLVSREASSRSVEPPVDNGKRNQITESRVQVERVQEKELEYVSANVEEHVNVSKEEEQKADGGQDRPRAERRKRKVPKPANLPNHSQGEQVAAGWPSWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDILTGKIVALKKVRFDNLEPESVKFMAREILILRRLNHDNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAANPSIKFTESQVKCFMQQLLSGLEHCHNRRVLHRDIKGSNLLIDSGGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIYKLCGSPSDEYWKRAKLPNATLFKPREPYKRCIKETFKDFPPSSLPLIETLLAIDPVERKTATDALNSEFFMTEPLACKPSNLPKYPPSKEMDARRRDDEARRYECLDFSFCSIYAWFVLRAIEKLAQAIFMRLRSFP | 471 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 34041110 | 34068582 | - | Tan0016517.2 | Tan09g0364 | 762707 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g0364 | 471 | Pfam | Protein kinase domain | 120 | 404 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan09g0364 | 471 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 240 | 252 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan09g0364 | 471 | SMART | serkin_6 | 120 | 404 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan09g0364 | 471 | MobiDBLite | consensus disorder prediction | 47 | 91 | - | - | |
Tan09g0364 | 471 | Gene3D | Phosphorylase Kinase; domain 1 | 107 | 202 | - | - | |
Tan09g0364 | 471 | SUPERFAMILY | Protein kinase-like (PK-like) | 114 | 408 | IPR011009 | - | |
Tan09g0364 | 471 | ProSiteProfiles | Protein kinase domain profile. | 120 | 404 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan09g0364 | 471 | ProSitePatterns | Protein kinases ATP-binding region signature. | 126 | 149 | IPR017441 | GO:0005524(InterPro) | |
Tan09g0364 | 471 | CDD | STKc_CDK9_like | 120 | 404 | - | - | |
Tan09g0364 | 471 | PANTHER | CELL DIVISION PROTEIN KINASE | 119 | 404 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Tan09g0364 | 471 | FunFam | probable serine/threonine-protein kinase At1g54610 | 203 | 442 | - | - | |
Tan09g0364 | 471 | MobiDBLite | consensus disorder prediction | 47 | 72 | - | - | |
Tan09g0364 | 471 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Tan09g0364 | 471 | Gene3D | Transferase(Phosphotransferase) domain 1 | 203 | 443 | - | - | |
Tan09g0364 | 471 | FunFam | probable serine/threonine-protein kinase At1g54610 | 107 | 202 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan09g0364 | Tan-Chr9:34041110 | Tan10g0948 | Tan-Chr10:8276276 | 2.20E-188 | dispersed | |
Tan09g0363 | Tan-Chr9:34041110 | Tan09g0364 | Tan-Chr9:34041110 | 7.20E-255 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68015 | PF00069 | Pkinase | 6.90E-68 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g0364 | K08819 | - | csv:101215893 | 835.869 |