Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0364 ATGGGGTGTTTGGTTAGCCGAGAGGCGTCTTCTAGAAGTGTAGAACCCCCTGTAGACAACGGGAAGAGGAATCAAATTACCGAGTCTCGTGTCCAAGTCGAGCGTGTTCAGGAAAAAGAACTAGAGTATGTTAGTGCTAATGTAGAGGAGCATGTAAATGTGAGCAAGGAGGAGGAGCAGAAGGCTGATGGGGGTCAGGATCGCCCACGGGCAGAGCGGAGAAAGAGGAAGGTTCCCAAGCCTGCTAACTTGCCAAACCATTCCCAGGGAGAGCAAGTTGCTGCTGGGTGGCCATCTTGGCTCACAGCAGTTTGTGGGGAGGCTCTCAATGGTTGGATTCCAAGGAAGGCTGATACATTTGAAAAGATTGATAAGATTGGACAAGGAACGTATAGCAATGTGTATAAAGCTAAAGATATACTTACAGGTAAAATTGTTGCACTGAAGAAGGTTAGATTTGACAATCTGGAACCCGAAAGTGTGAAGTTTATGGCTAGAGAGATTCTCATCCTCAGGAGATTAAATCACGACAATGTTGTGAAATTGGAGGGGTTGGTTACATCACGGATGTCTTGTAGTTTATACTTGGTGTTTGAGTACATGGAACATGATTTAGCTGGTCTTGCTGCTAATCCATCAATCAAGTTTACAGAATCTCAGGTTAAATGTTTCATGCAACAACTGCTATCTGGACTGGAACACTGTCACAATCGTCGTGTGCTTCACCGTGACATTAAAGGATCTAATCTTCTCATTGATAGTGGGGGAGTGCTTAAGATTGCTGACTTTGGATTGGCTTCTTTCTTTGACCCAAATCATAAGCACCCAATGACTAGTCGGGTAGTTACCTTATGGTATCGACCTCCTGAACTTCTTCTTGGAGCAACTGATTATGGAGTAGGTGTAGACCTCTGGAGTGCTGGGTGTATACTGGCTGAGTTATTAGCTGGGAGGCCTATTATGCCTGGTCGTACAGAGGTAGAGCAACTACACAAGATATACAAGCTTTGTGGCTCCCCTTCAGATGAATATTGGAAAAGAGCAAAACTGCCAAATGCAACCTTATTTAAGCCCAGAGAACCTTATAAAAGATGTATAAAGGAGACATTTAAAGATTTCCCTCCATCATCACTGCCCCTTATAGAAACGCTTCTTGCAATTGATCCAGTAGAACGAAAGACAGCAACAGATGCATTAAATAGTGAGTTCTTCATGACAGAGCCTTTAGCTTGCAAACCCTCCAACCTCCCGAAATATCCTCCCAGTAAGGAGATGGATGCTAGAAGACGGGATGATGAAGCTCGGAGGTATGAATGCCTTGATTTCAGTTTCTGCTCAATATATGCCTGGTTTGTTTTGAGAGCTATTGAGAAATTGGCGCAAGCTATTTTCATGAGGTTGAGATCGTTTCCCTAA 1416 43.86 MGCLVSREASSRSVEPPVDNGKRNQITESRVQVERVQEKELEYVSANVEEHVNVSKEEEQKADGGQDRPRAERRKRKVPKPANLPNHSQGEQVAAGWPSWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDILTGKIVALKKVRFDNLEPESVKFMAREILILRRLNHDNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAANPSIKFTESQVKCFMQQLLSGLEHCHNRRVLHRDIKGSNLLIDSGGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIYKLCGSPSDEYWKRAKLPNATLFKPREPYKRCIKETFKDFPPSSLPLIETLLAIDPVERKTATDALNSEFFMTEPLACKPSNLPKYPPSKEMDARRRDDEARRYECLDFSFCSIYAWFVLRAIEKLAQAIFMRLRSFP 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34041110 34068582 - Tan0016517.2 Tan09g0364 762707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0364 471 Pfam Protein kinase domain 120 404 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0364 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0364 471 SMART serkin_6 120 404 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0364 471 MobiDBLite consensus disorder prediction 47 91 - -
Tan09g0364 471 Gene3D Phosphorylase Kinase; domain 1 107 202 - -
Tan09g0364 471 SUPERFAMILY Protein kinase-like (PK-like) 114 408 IPR011009 -
Tan09g0364 471 ProSiteProfiles Protein kinase domain profile. 120 404 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0364 471 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524(InterPro)
Tan09g0364 471 CDD STKc_CDK9_like 120 404 - -
Tan09g0364 471 PANTHER CELL DIVISION PROTEIN KINASE 119 404 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Tan09g0364 471 FunFam probable serine/threonine-protein kinase At1g54610 203 442 - -
Tan09g0364 471 MobiDBLite consensus disorder prediction 47 72 - -
Tan09g0364 471 MobiDBLite consensus disorder prediction 1 32 - -
Tan09g0364 471 Gene3D Transferase(Phosphotransferase) domain 1 203 443 - -
Tan09g0364 471 FunFam probable serine/threonine-protein kinase At1g54610 107 202 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0364 Tan-Chr9:34041110 Tan10g0948 Tan-Chr10:8276276 2.20E-188 dispersed
Tan09g0363 Tan-Chr9:34041110 Tan09g0364 Tan-Chr9:34041110 7.20E-255 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68015 PF00069 Pkinase 6.90E-68 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0364 K08819 - csv:101215893 835.869