Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0381 ATGGACGAAAAAACTGATTCAATCAATGCTTTCTCTCATCTTCTTCAACATCCAGATTTCTCTCACTATGTTGAAATTGATCCCACTGGCAGATATGGAAGATACAATGAAATCCTCGGCAAAGGAGCTTCCAAGACAGTTTACAGAGCATTTGATGAGTATGAAGGGATTGAAGTTGCTTGGAATCAGGTCAAACTCTGTAACTTCCTTCAATGCCCTGAAGATCTTGAGAGGCTATACTCGGAGATTCATCTTTTAAAAACATTGAAACATAAGAACATTATGAAATTCTATACTTCTTGGGTCGATACTGCAAATAGGAACATCAACTTTGTAACTGAAATGTTCACGTCTGGAACTTTGAGGCAATATAGGCTAAAGCATAGGAGAGTTAACATTAGAGCAGTGAAGCGATGGTGTAGACAAATCTTGAGGGGTCTTCTCTATTTGCATAGCCAAAACCCTCCTGTGATCCACAGAGATCTCAAGTGTGATAACATTTTTGTTAATGGTAACCAAGGAGAAATTAAAATTGGAGATCTTGGTCTCGCTGCTATCCTCCGGAAATCGCATGCTGATCATTGCGTCGGGACACCAGAGTTCATGGCCCCTGAGGTATATGAAGGAGCATATAATGAATTGGTAGACATTTATTCTTTTGGGATGTGTGTTTTGGAGATGGTTACATTTGAATATCCATATAGTGAATGTAATCATCCAGTTCAAATCTATAAGAAAGTAATTTCTGGAAAAAAACCAGCTGCCTTGTATAAAGTGAAGGATCTGAGCATGCGGCAATTTGTCGAGAAATGCTTGGCACCAGTCTCTTGTAGACTTTCAGCAATGGAGCTTTTGAGTGACCCTTTTCTCCAAATTGATGATTGTGAAAGCAAGTCGAAACTTTCAGATTCTCGGGGAGAACTTGACGGTATTGCTTCTACTACAGCACACCCTTTCCTTGAACGAGAAAGAAGTGTCAGCTCAATTAATTACAGTTTGGAGGCCTCGGATGAATGGAGGTGTTGTACAGTTCAGACTGAACCCGACGGGATCGAACTTTTTGAGAACGTTGATGATGACCAATTGGAAAATCTTGATAACAGTATCAAGGGGAGGATAAGAGAAGATGGCAGCATTGTTCTAAGACTTAGGATTGTAGATAAAGAAGGACGAATTCGAAACATATATTTCCCATTTGACACCAAGAATGATACAGCATTAACGGTTGCCACCGAAATGATAGCAGAACTTGATATTACTGACCAAGATGTAATCAAGATAGCTGAAAAAATTGATGGGGAAATTGCTTCCTTGGTTCCCGAGTGGAAGCCGGGGCCTGGCATAGATGAAACTCCTCGCATCTCTTATGACGGTGGCTGTCAAAGCTACAACGCTTCTAACATTCCATCTGATAATCGTTTGATAGGGAATAAGCAAAATGGAGCAAAACTCTATCAGATTTTAAACTTAAGCACAAATGGACTTGCTTCAGCACACGAACATTTCGAGCAGGTCTCCCTCAAAGCAGATCAGCCTCCACAGCCTGTGGTAGAGAGCACACCAAAAGTTTCAAGCCAGCATTATCAGTCAAACTCCATCCTCCATGAAAACCAAGCTCATTGTTCTAATAGTTTTAGGCAAAGCCACTCTGATCAAAATTACAAGAAAACAGGCCAATCAATCATTGTTGGAGATAACAAAGAAAAAATACTAAATAGCAAGGCCAATGTCATTGCAAGAACTTCATTCAGAAGCTTACTGAGTTCCCGATCGCAGTCTACGGTTCGGTCCTATTGTGAAGATAAATTTGCATCTCAAATCCATTGGGAAATTAGATGGCTATGGAATTGA 1851 40.25 MDEKTDSINAFSHLLQHPDFSHYVEIDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLCNFLQCPEDLERLYSEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHRRVNIRAVKRWCRQILRGLLYLHSQNPPVIHRDLKCDNIFVNGNQGEIKIGDLGLAAILRKSHADHCVGTPEFMAPEVYEGAYNELVDIYSFGMCVLEMVTFEYPYSECNHPVQIYKKVISGKKPAALYKVKDLSMRQFVEKCLAPVSCRLSAMELLSDPFLQIDDCESKSKLSDSRGELDGIASTTAHPFLERERSVSSINYSLEASDEWRCCTVQTEPDGIELFENVDDDQLENLDNSIKGRIREDGSIVLRLRIVDKEGRIRNIYFPFDTKNDTALTVATEMIAELDITDQDVIKIAEKIDGEIASLVPEWKPGPGIDETPRISYDGGCQSYNASNIPSDNRLIGNKQNGAKLYQILNLSTNGLASAHEHFEQVSLKADQPPQPVVESTPKVSSQHYQSNSILHENQAHCSNSFRQSHSDQNYKKTGQSIIVGDNKEKILNSKANVIARTSFRSLLSSRSQSTVRSYCEDKFASQIHWEIRWLWN 616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35389756 35392824 - Tan0011102.1 Tan09g0381 762724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0381 616 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Tan09g0381 616 FunFam Probable serine/threonine-protein kinase WNK1 18 114 - -
Tan09g0381 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0381 616 Gene3D Transferase(Phosphotransferase) domain 1 116 296 - -
Tan09g0381 616 Gene3D - 377 479 - -
Tan09g0381 616 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0381 616 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 22 572 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Tan09g0381 616 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 379 435 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
Tan09g0381 616 SUPERFAMILY Protein kinase-like (PK-like) 36 546 IPR011009 -
Tan09g0381 616 FunFam probable serine/threonine-protein kinase WNK9 116 295 - -
Tan09g0381 616 CDD STKc_WNK 31 290 - -
Tan09g0381 616 SMART serkin_6 33 290 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0381 616 Pfam Protein kinase domain 36 290 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2524 Tan-Chr6:77851752 Tan09g0381 Tan-Chr9:35389756 1.20E-190 dispersed
Tan08g0454 Tan-Chr8:4363657 Tan09g0381 Tan-Chr9:35389756 4.50E-168 dispersed
Tan09g0381 Tan-Chr9:35389756 Tan10g0091 Tan-Chr10:1193348 2.60E-125 dispersed
Tan09g0381 Tan-Chr9:35389756 Tan01g1453 Tan-Chr1:14636184 5.50E-14 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68016 PF00069 Pkinase 2.00E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0381 K08867 - csv:101222641 1038.1