Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0399 ATGGATCCTCGCAACGACGCCGTTTTCCCCGACGAAGACCTCGAGGACGACGAGGAATCCCTCGACGACGACGATGACGACGAAGAAGAGGAGGAATTAAACGACGATCCTTCCCCTTCCACTTCCTCCGCCGGCGCCGCTGCTGTCCCTTCTGTTTCCCCTCTTGTCACCATCGCCACTCCCGGCACCACCGACCGTCCCGTCTCTGTTGTTCCTCCTCCTTCGATTGCCTCCATTTCCTCCGCCGATCTGATCCGTCAGCGCCTCGAGACCGTCTCCGCCGAGCCTTTGACCTTGCCGGGCGAGAAGAAGCCCTTGGATGAGTCCAGGAAGTTGTTTCAACGTCTTTGGACCGATGAGGATGAGATCGAGCTATTGCAGGGGTTTTTGGATTACACGATACAGCGTGGTACGACTCACCATCATCAGAACGATACGGCCTTGTTCTATGACCAGATCAAGTCCAAATTACAGTTGGATTTTAACAAGAATCAGCTCGTCGAGAAGCTTCGGAGGTTGAAGAAGAAGTACCGCAACGTTATTGGGAAGATTAGCTCTGGTAAGGACTTCAATTTCAAAAGCCCTCACGATCAGGCTACGTTCGAGATCTCTCGCAAGATCTGGAGTAATACCGGCCGAATTGGAGTCGAAGACAACGCTTTGGACGATGACGAGCCTGCTCCGACTCTGTATGCCAACTACATGGACGTTAGAAACGAAGAGATAATGGCGAATTGCGCAGAGAAGAAACCGACGCCGACACCAAAATCGCGGAAGCGTTCACGGCCTGGATCGGGATTGAGAATGGATGGGCCGCGATCGTCAAATGAAAATTTGAATAAAGAGAAAAACAGTACCTACAACAACAACAACAACGATAATGTCAATAACGTAGCGGTAGCGGGATTGATCGAGGAGACGGTGAGGAGCTGTCTGTCGCCACTGTTTAAGGAATTGTTGAGTAGTTCCATGGGAGGAGGGCTGTGTGGAGGCAGAGGGTTCAGTGGATTGGCTCTGCATCCGATTCCATTGAGCTTCGGTGGAGCTTCAATGAATTTTGGAGGTGGAGGAGAAATGGCGGATGAGAGATGGAGAAAGCAGCAGATTTTGGAACTGGAGGTTTATTCAAAGAGGTTGGAGTTGGTTCAGGAACAAATTAAGACGGCATTAGAAGACTTGAGATCCATGGGAGGCTGA 1197 51.04 MDPRNDAVFPDEDLEDDEESLDDDDDDEEEEELNDDPSPSTSSAGAAAVPSVSPLVTIATPGTTDRPVSVVPPPSIASISSADLIRQRLETVSAEPLTLPGEKKPLDESRKLFQRLWTDEDEIELLQGFLDYTIQRGTTHHHQNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVIGKISSGKDFNFKSPHDQATFEISRKIWSNTGRIGVEDNALDDDEPAPTLYANYMDVRNEEIMANCAEKKPTPTPKSRKRSRPGSGLRMDGPRSSNENLNKEKNSTYNNNNNDNVNNVAVAGLIEETVRSCLSPLFKELLSSSMGGGLCGGRGFSGLALHPIPLSFGGASMNFGGGGEMADERWRKQQILELEVYSKRLELVQEQIKTALEDLRSMGG 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 38430760 38432993 + Tan0004620.1 Tan09g0399 762742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0399 398 MobiDBLite consensus disorder prediction 1 52 - -
Tan09g0399 398 Coils Coil 163 183 - -
Tan09g0399 398 Coils Coil 372 392 - -
Tan09g0399 398 MobiDBLite consensus disorder prediction 271 292 - -
Tan09g0399 398 MobiDBLite consensus disorder prediction 245 292 - -
Tan09g0399 398 PANTHER BNAANNG10740D PROTEIN-RELATED 15 395 IPR007592 GO:0005634(PANTHER)|GO:0006355(InterPro)
Tan09g0399 398 MobiDBLite consensus disorder prediction 9 36 - -
Tan09g0399 398 Pfam Glabrous-enhancer-binding protein-like family, DBD domain 113 209 IPR053932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2376 Tan-Chr3:77569790 Tan09g0399 Tan-Chr9:38430760 9.70E-23 dispersed
Tan08g0457 Tan-Chr8:4388549 Tan09g0399 Tan-Chr9:38430760 4.40E-35 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28278 PF04504 DUF573 6.00E-34 CL0123 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0399 - - - 0.0