Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0484 ATGAGGATTATGATAAAAGGTGGTGTGTGGAAGAACACGGAAGATGAGATCCTTAAAGCTGCGGTTATGAAATATGGGAAAAACCAGTGGGCTCGAATCTCGTCGCTTCTTGTTCGGAAATCTGCTAAGCAGTGTAAGGCTCGCTGGTATGAGTGGCTCGACCCCTCCATTAAAAAGACTGAGTGGACAAGAGAGGAGGATGAGAAACTACTCCATCTTGCTAAGCTCATGCCAACCCAGTGGAGAACTATTGCACCAATTGTCGGGCGTACTCCATCCCAGTGCCTCGAGCGGTATGAGAAGCTTCTTGATGCTGCTTGTGTTAAGGATGAGAATTACGAACCAGGAGATGACCCAAGAAAATTGCGCCCTGGAGAAATTGACCCAAACCCAGAATCAAAGCCTGCACGTCCTGATCCTGTTGACATGGATGAAGATGAAAAGGAAATGCTTTCTGAAGCACGGGCAAGGTTAGCAAATACTAGGGGAAAGAAGGCAAAAAGGAAAGCCAGAGAGAAACAACTTGAAGAGGCCAGGAGGCTTGCTTCCCTACAAAAAAGAAGAGAGCTAAAAGCTGCAGGGATTGATACTCGACAACGGAAGAGAAAGAGGAAAGGAATAGATTACAATGCTGAAATTCCTTTTGAGAAAAGGCCTCCTCCGGGTTTTTTTGATGTTAGTGAGGAAGATAGACCAGTGGAACAGCCCAAGTTTCCAACAACAATTGAAGAACTTGAAGGAAAAAGAAGGATTGACGTAGAAGCTCAATTAAGAAAGCAGGATATTGCAAAGAATAAAATTGCTCAGAGGCAGGATGCTCCATCAGCTGTACTGCAAGCAAATAAGCTGAATGACCCAGAAATGGTGAGGAAAAGATCTAAACTTATGCTTCCCGCACCTCAAATTTCAGACCATGAATTGGAGGAAATTGCAAAGATGGGATATGCCAGTGATCTTCTTTCTGGTAATGAAGAGCTTGCAGAAGGAAGTGGTGCTACACGTGCTCTGCTTGCAAATTATGCACAGACACCACGGCAAGGAATGACACCTTTTCGAACTCCCCAAAGGACGCCGGCTGGGAAAGGTGATGCTATCATGATGGAGGCAGAAAACCTTGCTAGGCTGAGAGAATCTCAGACTCCATTATTGGGAGGAGAGAATCCAGAGCTGCATCCTTCAGATTTTTCAGGGGTCACCCCAAGGAAAAAGGAGATTCAAACACCAAATCCTATGCTAACACCCTCAGCAACTCCTGGTGGTGTTGGTCTCACTCCTCGTAGCGGCATGACACCAGCTAGGGATGCTTACTCGTTTGGCATGACTCCCAAAGGAACACCTATTAGAGATGAGTTACATATCAACGAAGATATGGACGCACATGATAGTGCAAAACTAGAGTCTCAAAGACAAGCTGATTTGAGGAAGAATCTTAGCCTAGGATTAGGCAATCTTCCACAGCCTAAGAATGAGTACCAGGTTGTTATGCAACCAATTCCTGAAGACAAAGAAGAACCAGAGGAGATGATTGAAGAGGATATGTCTGACAGGATAGCTAGAGAACGAGCTGAGGAAGAAGCAAGGCAGCAGGCTTTGCTTAGGAAAAGATCAAAAGTGCTACAGAGGGAGCTTCCTCGGCCTCCTACTGCTTCTTTGGAACTTATTAGAAATTCTTTGATGAGAGCTGATGGAGACAAGAGTTCATTTGTTCCACCTACCCCTATTGAGCAGGCTGATGAAATGATAAGAAAGGAACTTCTTACTTTATTAGAGCATGATAATGCGAAGTACCCGATCGACGAAAAGGTCAACAAGGAGAAAAAGAAAGGTTCCAAGCGCACTGGAAATAGACCTACTGCAGCCATCCCTACAATAGATGATTTTGAAGAAGCTGAGATGGAAGAGGCTGATTATTTGATAAAGGAAGAGGCCCGGTATCTGTGTGTTGCGATGGGGCATGAAAATGAATCCTTAGAGGAATTTGTGGAAGCTCACAAAACGTGCTTAAACGATCTTATGTACTTCCCCACAAGGAATGCTTATGGACTTTCCAGCGTGGCTGGAAACCATGAGAAACTAGCCGCCCTGCAGGATGAATTTGAGTATGTTAAAAAGAAAATGGATGATGATACTGAGAAGGCTGTCCGGCTGGAGAAGAAGGTTAAAGTTCTCACACATGGCTATGAGACACGGTCAAAACAAAGCCTTTGGCCGCAAATTGAGGCGACTTTCAAGCAGATAGACACTGCAGCAACAGAGCTGGAGTGCTTTGAAGCTCTTCAAAAGCAAGAGATGTCAGCTGCTTCACACAGGATTAGTGGTATCTGGGAGGAGGTTCAGAAACAAAAAGAGCTGGAGAGAACTCTGCAGCTACGTTATGGTAACCTTTTGGCGGACTTGGAGAAGATGCAGAAAATCATGGACGAGCGCAAGGCACAGGCTCAAAAGGAAGAAGAAATTGCAGCGGAGAATATCGCTCTTCAGTTGGCCAAGGCTGAGGCAGCACAAAAGGAAGAAGAAAATGCAGTGGAGAATCGCGTTTTTCAGTTGGCCGAGGCTGAGGCAGCACAAAAGGAAGAAGAAATTGCAGTGGATAATCACTCTCTTCAGTTGGCCGAGGCTGAGGCTAATCAAACCGTTGGAGAAAATGCTGATAGTTCTGAAGCTGTGTCTGCATTAGCAGTTGATCGTGAAAATTCTATGCCTGTTACCTCAACTCCCAATGAATTGACGGGTGAACAACCAAACTTGTCTGTGGGGCCCGATCATGAAACTTCTAATGCGATGGATATTGATATAGAGAAAGAAAATGTAGCGATGAGCTCAGATATTGGCTCACCTGATAACAAACTACCTTCAGTTGGAGAGAATGCATCATTGCCTGACAATGGTTTCAAAGATTCTGATATAAGTCAACCCAGTGATGTTCCTCCACAAGAACTCTTGGTCCCTCCTGCAAATAGCAGTCCAGATGTGACCGTTACGGCGGAAGATAAGATCAGCAATGATTCGGTTGATGGAGAAGCAATTGAAAATGCCGAATGTAGTACCGATATTGTGGAGGAAGTCAAAGATGTCAAAGCTCAGCAGCCTGTGATTGAAGCTGGAAACTCGGATGTGAATTCGACTAACCTGGATTCTGCTGCACCTGCACCTTCTAATAAGGATGACCCTGCTTATAACGATAACGTGGAACTCCCTCGTGACGAAGGTGAAGCTACGGGATCAAATGTCTAG 3234 45.05 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARRLASLQKRRELKAAGIDTRQRKRKRKGIDYNAEIPFEKRPPPGFFDVSEEDRPVEQPKFPTTIEELEGKRRIDVEAQLRKQDIAKNKIAQRQDAPSAVLQANKLNDPEMVRKRSKLMLPAPQISDHELEEIAKMGYASDLLSGNEELAEGSGATRALLANYAQTPRQGMTPFRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPRKKEIQTPNPMLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELHINEDMDAHDSAKLESQRQADLRKNLSLGLGNLPQPKNEYQVVMQPIPEDKEEPEEMIEEDMSDRIARERAEEEARQQALLRKRSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLTLLEHDNAKYPIDEKVNKEKKKGSKRTGNRPTAAIPTIDDFEEAEMEEADYLIKEEARYLCVAMGHENESLEEFVEAHKTCLNDLMYFPTRNAYGLSSVAGNHEKLAALQDEFEYVKKKMDDDTEKAVRLEKKVKVLTHGYETRSKQSLWPQIEATFKQIDTAATELECFEALQKQEMSAASHRISGIWEEVQKQKELERTLQLRYGNLLADLEKMQKIMDERKAQAQKEEEIAAENIALQLAKAEAAQKEEENAVENRVFQLAEAEAAQKEEEIAVDNHSLQLAEAEANQTVGENADSSEAVSALAVDRENSMPVTSTPNELTGEQPNLSVGPDHETSNAMDIDIEKENVAMSSDIGSPDNKLPSVGENASLPDNGFKDSDISQPSDVPPQELLVPPANSSPDVTVTAEDKISNDSVDGEAIENAECSTDIVEEVKDVKAQQPVIEAGNSDVNSTNLDSAAPAPSNKDDPAYNDNVELPRDEGEATGSNV 1077
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 45481686 45498853 - Tan0001688.1 Tan09g0484 762827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0484 1077 Coils Coil 167 187 - -
Tan09g0484 1077 Gene3D - 60 114 - -
Tan09g0484 1077 FunFam CDC5 cell division cycle 5-like 5 59 - -
Tan09g0484 1077 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Tan09g0484 1077 MobiDBLite consensus disorder prediction 157 176 - -
Tan09g0484 1077 MobiDBLite consensus disorder prediction 400 414 - -
Tan09g0484 1077 MobiDBLite consensus disorder prediction 1027 1077 - -
Tan09g0484 1077 CDD SANT 10 53 IPR001005 -
Tan09g0484 1077 FunFam CDC5 cell division cycle 5-like 60 120 - -
Tan09g0484 1077 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Tan09g0484 1077 MobiDBLite consensus disorder prediction 940 992 - -
Tan09g0484 1077 CDD SANT_CDC5_II 55 106 IPR047240 -
Tan09g0484 1077 Coils Coil 856 876 - -
Tan09g0484 1077 MobiDBLite consensus disorder prediction 382 421 - -
Tan09g0484 1077 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Tan09g0484 1077 MobiDBLite consensus disorder prediction 599 621 - -
Tan09g0484 1077 MobiDBLite consensus disorder prediction 1033 1049 - -
Tan09g0484 1077 MobiDBLite consensus disorder prediction 213 234 - -
Tan09g0484 1077 SMART sant 58 105 IPR001005 -
Tan09g0484 1077 SMART sant 6 55 IPR001005 -
Tan09g0484 1077 Gene3D - 5 59 - -
Tan09g0484 1077 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Tan09g0484 1077 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Tan09g0484 1077 MobiDBLite consensus disorder prediction 895 924 - -
Tan09g0484 1077 Coils Coil 796 846 - -
Tan09g0484 1077 Pfam Myb-like DNA-binding domain 10 70 - -
Tan09g0484 1077 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 807 IPR047242 GO:0000398(InterPro)|GO:0000398(PANTHER)|GO:0000974(PANTHER)|GO:0000974(InterPro)|GO:0005681(PANTHER)
Tan09g0484 1077 MobiDBLite consensus disorder prediction 897 922 - -
Tan09g0484 1077 Pfam pre-mRNA splicing factor component 407 658 IPR021786 -
Tan09g0484 1077 MobiDBLite consensus disorder prediction 113 150 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0484 Tan-Chr9:45481686 Tan09g1842 Tan-Chr9:69769891 5.80E-11 dispersed
Tan09g0484 Tan-Chr9:45481686 Tan09g0485 Tan-Chr9:45481686 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28280 PF11831 Myb_Cef 3.00E-59 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0484 K12860 - csv:101206265 1709.89