Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g0484 | ATGAGGATTATGATAAAAGGTGGTGTGTGGAAGAACACGGAAGATGAGATCCTTAAAGCTGCGGTTATGAAATATGGGAAAAACCAGTGGGCTCGAATCTCGTCGCTTCTTGTTCGGAAATCTGCTAAGCAGTGTAAGGCTCGCTGGTATGAGTGGCTCGACCCCTCCATTAAAAAGACTGAGTGGACAAGAGAGGAGGATGAGAAACTACTCCATCTTGCTAAGCTCATGCCAACCCAGTGGAGAACTATTGCACCAATTGTCGGGCGTACTCCATCCCAGTGCCTCGAGCGGTATGAGAAGCTTCTTGATGCTGCTTGTGTTAAGGATGAGAATTACGAACCAGGAGATGACCCAAGAAAATTGCGCCCTGGAGAAATTGACCCAAACCCAGAATCAAAGCCTGCACGTCCTGATCCTGTTGACATGGATGAAGATGAAAAGGAAATGCTTTCTGAAGCACGGGCAAGGTTAGCAAATACTAGGGGAAAGAAGGCAAAAAGGAAAGCCAGAGAGAAACAACTTGAAGAGGCCAGGAGGCTTGCTTCCCTACAAAAAAGAAGAGAGCTAAAAGCTGCAGGGATTGATACTCGACAACGGAAGAGAAAGAGGAAAGGAATAGATTACAATGCTGAAATTCCTTTTGAGAAAAGGCCTCCTCCGGGTTTTTTTGATGTTAGTGAGGAAGATAGACCAGTGGAACAGCCCAAGTTTCCAACAACAATTGAAGAACTTGAAGGAAAAAGAAGGATTGACGTAGAAGCTCAATTAAGAAAGCAGGATATTGCAAAGAATAAAATTGCTCAGAGGCAGGATGCTCCATCAGCTGTACTGCAAGCAAATAAGCTGAATGACCCAGAAATGGTGAGGAAAAGATCTAAACTTATGCTTCCCGCACCTCAAATTTCAGACCATGAATTGGAGGAAATTGCAAAGATGGGATATGCCAGTGATCTTCTTTCTGGTAATGAAGAGCTTGCAGAAGGAAGTGGTGCTACACGTGCTCTGCTTGCAAATTATGCACAGACACCACGGCAAGGAATGACACCTTTTCGAACTCCCCAAAGGACGCCGGCTGGGAAAGGTGATGCTATCATGATGGAGGCAGAAAACCTTGCTAGGCTGAGAGAATCTCAGACTCCATTATTGGGAGGAGAGAATCCAGAGCTGCATCCTTCAGATTTTTCAGGGGTCACCCCAAGGAAAAAGGAGATTCAAACACCAAATCCTATGCTAACACCCTCAGCAACTCCTGGTGGTGTTGGTCTCACTCCTCGTAGCGGCATGACACCAGCTAGGGATGCTTACTCGTTTGGCATGACTCCCAAAGGAACACCTATTAGAGATGAGTTACATATCAACGAAGATATGGACGCACATGATAGTGCAAAACTAGAGTCTCAAAGACAAGCTGATTTGAGGAAGAATCTTAGCCTAGGATTAGGCAATCTTCCACAGCCTAAGAATGAGTACCAGGTTGTTATGCAACCAATTCCTGAAGACAAAGAAGAACCAGAGGAGATGATTGAAGAGGATATGTCTGACAGGATAGCTAGAGAACGAGCTGAGGAAGAAGCAAGGCAGCAGGCTTTGCTTAGGAAAAGATCAAAAGTGCTACAGAGGGAGCTTCCTCGGCCTCCTACTGCTTCTTTGGAACTTATTAGAAATTCTTTGATGAGAGCTGATGGAGACAAGAGTTCATTTGTTCCACCTACCCCTATTGAGCAGGCTGATGAAATGATAAGAAAGGAACTTCTTACTTTATTAGAGCATGATAATGCGAAGTACCCGATCGACGAAAAGGTCAACAAGGAGAAAAAGAAAGGTTCCAAGCGCACTGGAAATAGACCTACTGCAGCCATCCCTACAATAGATGATTTTGAAGAAGCTGAGATGGAAGAGGCTGATTATTTGATAAAGGAAGAGGCCCGGTATCTGTGTGTTGCGATGGGGCATGAAAATGAATCCTTAGAGGAATTTGTGGAAGCTCACAAAACGTGCTTAAACGATCTTATGTACTTCCCCACAAGGAATGCTTATGGACTTTCCAGCGTGGCTGGAAACCATGAGAAACTAGCCGCCCTGCAGGATGAATTTGAGTATGTTAAAAAGAAAATGGATGATGATACTGAGAAGGCTGTCCGGCTGGAGAAGAAGGTTAAAGTTCTCACACATGGCTATGAGACACGGTCAAAACAAAGCCTTTGGCCGCAAATTGAGGCGACTTTCAAGCAGATAGACACTGCAGCAACAGAGCTGGAGTGCTTTGAAGCTCTTCAAAAGCAAGAGATGTCAGCTGCTTCACACAGGATTAGTGGTATCTGGGAGGAGGTTCAGAAACAAAAAGAGCTGGAGAGAACTCTGCAGCTACGTTATGGTAACCTTTTGGCGGACTTGGAGAAGATGCAGAAAATCATGGACGAGCGCAAGGCACAGGCTCAAAAGGAAGAAGAAATTGCAGCGGAGAATATCGCTCTTCAGTTGGCCAAGGCTGAGGCAGCACAAAAGGAAGAAGAAAATGCAGTGGAGAATCGCGTTTTTCAGTTGGCCGAGGCTGAGGCAGCACAAAAGGAAGAAGAAATTGCAGTGGATAATCACTCTCTTCAGTTGGCCGAGGCTGAGGCTAATCAAACCGTTGGAGAAAATGCTGATAGTTCTGAAGCTGTGTCTGCATTAGCAGTTGATCGTGAAAATTCTATGCCTGTTACCTCAACTCCCAATGAATTGACGGGTGAACAACCAAACTTGTCTGTGGGGCCCGATCATGAAACTTCTAATGCGATGGATATTGATATAGAGAAAGAAAATGTAGCGATGAGCTCAGATATTGGCTCACCTGATAACAAACTACCTTCAGTTGGAGAGAATGCATCATTGCCTGACAATGGTTTCAAAGATTCTGATATAAGTCAACCCAGTGATGTTCCTCCACAAGAACTCTTGGTCCCTCCTGCAAATAGCAGTCCAGATGTGACCGTTACGGCGGAAGATAAGATCAGCAATGATTCGGTTGATGGAGAAGCAATTGAAAATGCCGAATGTAGTACCGATATTGTGGAGGAAGTCAAAGATGTCAAAGCTCAGCAGCCTGTGATTGAAGCTGGAAACTCGGATGTGAATTCGACTAACCTGGATTCTGCTGCACCTGCACCTTCTAATAAGGATGACCCTGCTTATAACGATAACGTGGAACTCCCTCGTGACGAAGGTGAAGCTACGGGATCAAATGTCTAG | 3234 | 45.05 | MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARRLASLQKRRELKAAGIDTRQRKRKRKGIDYNAEIPFEKRPPPGFFDVSEEDRPVEQPKFPTTIEELEGKRRIDVEAQLRKQDIAKNKIAQRQDAPSAVLQANKLNDPEMVRKRSKLMLPAPQISDHELEEIAKMGYASDLLSGNEELAEGSGATRALLANYAQTPRQGMTPFRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPRKKEIQTPNPMLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELHINEDMDAHDSAKLESQRQADLRKNLSLGLGNLPQPKNEYQVVMQPIPEDKEEPEEMIEEDMSDRIARERAEEEARQQALLRKRSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLTLLEHDNAKYPIDEKVNKEKKKGSKRTGNRPTAAIPTIDDFEEAEMEEADYLIKEEARYLCVAMGHENESLEEFVEAHKTCLNDLMYFPTRNAYGLSSVAGNHEKLAALQDEFEYVKKKMDDDTEKAVRLEKKVKVLTHGYETRSKQSLWPQIEATFKQIDTAATELECFEALQKQEMSAASHRISGIWEEVQKQKELERTLQLRYGNLLADLEKMQKIMDERKAQAQKEEEIAAENIALQLAKAEAAQKEEENAVENRVFQLAEAEAAQKEEEIAVDNHSLQLAEAEANQTVGENADSSEAVSALAVDRENSMPVTSTPNELTGEQPNLSVGPDHETSNAMDIDIEKENVAMSSDIGSPDNKLPSVGENASLPDNGFKDSDISQPSDVPPQELLVPPANSSPDVTVTAEDKISNDSVDGEAIENAECSTDIVEEVKDVKAQQPVIEAGNSDVNSTNLDSAAPAPSNKDDPAYNDNVELPRDEGEATGSNV | 1077 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 45481686 | 45498853 | - | Tan0001688.1 | Tan09g0484 | 762827 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g0484 | 1077 | Coils | Coil | 167 | 187 | - | - | |
Tan09g0484 | 1077 | Gene3D | - | 60 | 114 | - | - | |
Tan09g0484 | 1077 | FunFam | CDC5 cell division cycle 5-like | 5 | 59 | - | - | |
Tan09g0484 | 1077 | ProSiteProfiles | Myb-like domain profile. | 2 | 53 | IPR001005 | - | |
Tan09g0484 | 1077 | MobiDBLite | consensus disorder prediction | 157 | 176 | - | - | |
Tan09g0484 | 1077 | MobiDBLite | consensus disorder prediction | 400 | 414 | - | - | |
Tan09g0484 | 1077 | MobiDBLite | consensus disorder prediction | 1027 | 1077 | - | - | |
Tan09g0484 | 1077 | CDD | SANT | 10 | 53 | IPR001005 | - | |
Tan09g0484 | 1077 | FunFam | CDC5 cell division cycle 5-like | 60 | 120 | - | - | |
Tan09g0484 | 1077 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 58 | 107 | IPR017930 | - | |
Tan09g0484 | 1077 | MobiDBLite | consensus disorder prediction | 940 | 992 | - | - | |
Tan09g0484 | 1077 | CDD | SANT_CDC5_II | 55 | 106 | IPR047240 | - | |
Tan09g0484 | 1077 | Coils | Coil | 856 | 876 | - | - | |
Tan09g0484 | 1077 | MobiDBLite | consensus disorder prediction | 382 | 421 | - | - | |
Tan09g0484 | 1077 | SUPERFAMILY | Homeodomain-like | 33 | 106 | IPR009057 | - | |
Tan09g0484 | 1077 | MobiDBLite | consensus disorder prediction | 599 | 621 | - | - | |
Tan09g0484 | 1077 | MobiDBLite | consensus disorder prediction | 1033 | 1049 | - | - | |
Tan09g0484 | 1077 | MobiDBLite | consensus disorder prediction | 213 | 234 | - | - | |
Tan09g0484 | 1077 | SMART | sant | 58 | 105 | IPR001005 | - | |
Tan09g0484 | 1077 | SMART | sant | 6 | 55 | IPR001005 | - | |
Tan09g0484 | 1077 | Gene3D | - | 5 | 59 | - | - | |
Tan09g0484 | 1077 | ProSiteProfiles | Myb-like domain profile. | 54 | 103 | IPR001005 | - | |
Tan09g0484 | 1077 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 2 | 57 | IPR017930 | - | |
Tan09g0484 | 1077 | MobiDBLite | consensus disorder prediction | 895 | 924 | - | - | |
Tan09g0484 | 1077 | Coils | Coil | 796 | 846 | - | - | |
Tan09g0484 | 1077 | Pfam | Myb-like DNA-binding domain | 10 | 70 | - | - | |
Tan09g0484 | 1077 | PANTHER | CELL DIVISION CYCLE 5-LIKE PROTEIN | 1 | 807 | IPR047242 | GO:0000398(InterPro)|GO:0000398(PANTHER)|GO:0000974(PANTHER)|GO:0000974(InterPro)|GO:0005681(PANTHER) | |
Tan09g0484 | 1077 | MobiDBLite | consensus disorder prediction | 897 | 922 | - | - | |
Tan09g0484 | 1077 | Pfam | pre-mRNA splicing factor component | 407 | 658 | IPR021786 | - | |
Tan09g0484 | 1077 | MobiDBLite | consensus disorder prediction | 113 | 150 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan09g0484 | Tan-Chr9:45481686 | Tan09g1842 | Tan-Chr9:69769891 | 5.80E-11 | dispersed | |
Tan09g0484 | Tan-Chr9:45481686 | Tan09g0485 | Tan-Chr9:45481686 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28280 | PF11831 | Myb_Cef | 3.00E-59 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g0484 | K12860 | - | csv:101206265 | 1709.89 |