Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0485 ATGCCAACCCAGTGGAGAACTATTGCACCAATTGTCGGGCGTACTCCATCCCAGTGCCTCGAGCGGTATGAGAAGCTTCTTGATGCTGCTTGTGTTAAGGATGAGAATTACGAACCAGGAGATGACCCAAGAAAATTGCGCCCTGGAGAAATTGACCCAAACCCAGAATCAAAGCCTGCACGTCCTGATCCTGTTGACATGGATGAAGATGAAAAGGAAATGCTTTCTGAAGCACGGGCAAGGTTAGCAAATACTAGGGGAAAGAAGGCAAAAAGGAAAGCCAGAGAGAAACAACTTGAAGAGGCCAGGAGGCTTGCTTCCCTACAAAAAAGAAGAGAGCTAAAAGCTGCAGGGATTGATACTCGACAACGGAAGAGAAAGAGGAAAGGAATAGATTACAATGCTGAAATTCCTTTTGAGAAAAGGCCTCCTCCGGGTTTTTTTGATGTTAGTGAGGAAGATAGACCAGTGGAACAGCCCAAGTTTCCAACAACAATTGAAGAACTTGAAGGAAAAAGAAGGATTGACGTAGAAGCTCAATTAAGAAAGCAGGATATTGCAAAGAATAAAATTGCTCAGAGGCAGGATGCTCCATCAGCTGTACTGCAAGCAAATAAGCTGAATGACCCAGAAATGGTGAGGAAAAGATCTAAACTTATGCTTCCCGCACCTCAAATTTCAGACCATGAATTGGAGGAAATTGCAAAGATGGGATATGCCAGTGATCTTCTTTCTGGTAATGAAGAGCTTGCAGAAGGAAGTGGTGCTACACGTGCTCTGCTTGCAAATTATGCACAGACACCACGGCAAGGAATGACACCTTTTCGAACTCCCCAAAGGACGCCGGCTGGGAAAGGTGATGCTATCATGATGGAGGCAGAAAACCTTGCTAGGCTGAGAGAATCTCAGACTCCATTATTGGGAGGAGAGAATCCAGAGCTGCATCCTTCAGATTTTTCAGGGGTCACCCCAAGGAAAAAGGAGATTCAAACACCAAATCCTATGCTAACACCCTCAGCAACTCCTGGTGGTGTTGGTCTCACTCCTCGTAGCGGCATGACACCAGCTAGGGATGCTTACTCGTTTGGCATGACTCCCAAAGGAACACCTATTAGAGATGAGTTACATATCAACGAAGATATGGACGCACATGATAGTGCAAAACTAGAGTCTCAAAGACAAGCTGATTTGAGGAAGAATCTTAGCCTAGGATTAGGCAATCTTCCACAGCCTAAGAATGAGTACCAGGTTGTTATGCAACCAATTCCTGAAGACAAAGAAGAACCAGAGGAGATGATTGAAGAGGATATGTCTGACAGGATAGCTAGAGAACGAGCTGAGGAAGAAGCAAGGCAGCAGGCTTTGCTTAGGAAAAGATCAAAAGTGCTACAGAGGGAGCTTCCTCGGCCTCCTACTGCTTCTTTGGAACTTATTAGAAATTCTTTGATGAGAGCTGATGGAGACAAGAGTTCATTTGTTCCACCTACCCCTATTGAGCAGGCTGATGAAATGATAAGAAAGGAACTTCTTACTTTATTAGAGCATGATAATGCGAAGTACCCGATCGACGAAAAGGTCAACAAGGAGAAAAAGAAAGGTTCCAAGCGCACTGGAAATAGACCTACTGCAGCCATCCCTACAATAGATGATTTTGAAGAAGCTGAGATGGAAGAGGCTGATTATTTGATAAAGGAAGAGGCCCGGTATCTGTGTGTTGCGATGGGGCATGAAAATGAATCCTTAGAGGAATTTGTGGAAGCTCACAAAACGTGCTTAAACGATCTTATGTACTTCCCCACAAGGAATGCTTATGGACTTTCCAGCGTGGCTGGAAACCATGAGAAACTAGCCGCCCTGCAGGATGAATTTGAGTATGTTAAAAAGAAAATGGATGATGATACTGAGAAGGCTGTCCGGCTGGAGAAGAAGGTTAAAGTTCTCACACATGGCTATGAGACACGGTCAAAACAAAGCCTTTGGCCGCAAATTGAGGCGACTTTCAAGCAGATAGACACTGCAGCAACAGAGCTGGAGTGCTTTGAAGCTCTTCAAAAGCAAGAGATGTCAGCTGCTTCACACAGGATTAGTGGTATCTGGGAGGAGGTTCAGAAACAAAAAGAGCTGGAGAGAACTCTGCAGCTACGTTATGGTAACCTTTTGGCGGACTTGGAGAAGATGCAGAAAATCATGGACGAGCGCAAGGCACAGGCTCAAAAGGAAGAAGAAATTGCAGCGGAGAATATCGCTCTTCAGTTGGCCAAGGCTGAGGCAGCACAAAAGGAAGAAGAAAATGCAGTGGAGAATCGCGTTTTTCAGTTGGCCGAGGCTGAGGCAGCACAAAAGGAAGAAGAAATTGCAGTGGATAATCACTCTCTTCAGTTGGCCGAGGCTGAGGCTAATCAAACCGTTGGAGAAAATGCTGATAGTTCTGAAGCTGTGTCTGCATTAGCAGTTGATCGTGAAAATTCTATGCCTGTTACCTCAACTCCCAATGAATTGACGGGTGAACAACCAAACTTGTCTGTGGGGCCCGATCATGAAACTTCTAATGCGATGGATATTGATATAGAGAAAGAAAATGTAGCGATGAGCTCAGATATTGGCTCACCTGATAACAAACTACCTTCAGTTGGAGAGAATGCATCATTGCCTGACAATGGTTTCAAAGATTCTGATATAAGTCAACCCAGTGATGTTCCTCCACAAGAACTCTTGGTCCCTCCTGCAAATAGCAGTCCAGATGTGACCGTTACGGCGGAAGATAAGATCAGCAATGATTCGGTTGATGGAGAAGCAATTGAAAATGCCGAATGTAGTACCGATATTGTGGAGGAAGTCAAAGATGTCAAAGCTCAGCAGCCTGTGATTGAAGCTGGAAACTCGGATGTGAATTCGACTAACCTGGATTCTGCTGCACCTGCACCTTCTAATAAGGATGACCCTGCTTATAACGATAACGTGGAACTCCCTCGTGACGAAGGTGAAGCTACGGGATCAAATGTCTAG 3006 44.98 MPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARRLASLQKRRELKAAGIDTRQRKRKRKGIDYNAEIPFEKRPPPGFFDVSEEDRPVEQPKFPTTIEELEGKRRIDVEAQLRKQDIAKNKIAQRQDAPSAVLQANKLNDPEMVRKRSKLMLPAPQISDHELEEIAKMGYASDLLSGNEELAEGSGATRALLANYAQTPRQGMTPFRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPRKKEIQTPNPMLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELHINEDMDAHDSAKLESQRQADLRKNLSLGLGNLPQPKNEYQVVMQPIPEDKEEPEEMIEEDMSDRIARERAEEEARQQALLRKRSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLTLLEHDNAKYPIDEKVNKEKKKGSKRTGNRPTAAIPTIDDFEEAEMEEADYLIKEEARYLCVAMGHENESLEEFVEAHKTCLNDLMYFPTRNAYGLSSVAGNHEKLAALQDEFEYVKKKMDDDTEKAVRLEKKVKVLTHGYETRSKQSLWPQIEATFKQIDTAATELECFEALQKQEMSAASHRISGIWEEVQKQKELERTLQLRYGNLLADLEKMQKIMDERKAQAQKEEEIAAENIALQLAKAEAAQKEEENAVENRVFQLAEAEAAQKEEEIAVDNHSLQLAEAEANQTVGENADSSEAVSALAVDRENSMPVTSTPNELTGEQPNLSVGPDHETSNAMDIDIEKENVAMSSDIGSPDNKLPSVGENASLPDNGFKDSDISQPSDVPPQELLVPPANSSPDVTVTAEDKISNDSVDGEAIENAECSTDIVEEVKDVKAQQPVIEAGNSDVNSTNLDSAAPAPSNKDDPAYNDNVELPRDEGEATGSNV 1001
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 45481686 45498853 - Tan0001688.2 Tan09g0485 762828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0485 1001 MobiDBLite consensus disorder prediction 951 1001 - -
Tan09g0485 1001 MobiDBLite consensus disorder prediction 523 545 - -
Tan09g0485 1001 MobiDBLite consensus disorder prediction 306 345 - -
Tan09g0485 1001 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 31 IPR017930 -
Tan09g0485 1001 MobiDBLite consensus disorder prediction 821 846 - -
Tan09g0485 1001 MobiDBLite consensus disorder prediction 324 338 - -
Tan09g0485 1001 Coils Coil 91 111 - -
Tan09g0485 1001 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 731 IPR047242 GO:0000398(InterPro)|GO:0000398(PANTHER)|GO:0000974(PANTHER)|GO:0000974(InterPro)|GO:0005681(PANTHER)
Tan09g0485 1001 MobiDBLite consensus disorder prediction 819 848 - -
Tan09g0485 1001 MobiDBLite consensus disorder prediction 957 973 - -
Tan09g0485 1001 MobiDBLite consensus disorder prediction 137 158 - -
Tan09g0485 1001 Coils Coil 720 770 - -
Tan09g0485 1001 MobiDBLite consensus disorder prediction 864 916 - -
Tan09g0485 1001 Coils Coil 780 800 - -
Tan09g0485 1001 Pfam pre-mRNA splicing factor component 331 582 IPR021786 -
Tan09g0485 1001 MobiDBLite consensus disorder prediction 81 100 - -
Tan09g0485 1001 MobiDBLite consensus disorder prediction 33 74 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0484 Tan-Chr9:45481686 Tan09g0485 Tan-Chr9:45481686 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0485 K12860 - csv:101206265 1553.88