Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g0521 | ATGCCTTCAAAGGGAAAGAAGAACTCAACGACACTTTCTAGATTGTCAAACTCGAGCCACTCTCAATCTCCACTGCCACGATTGGCAATACCTCCTGCCTCTGAAGTTTGTGATGATGAATTTCTTTCCTCTATTGAAAAATCTGCTTTCATTGGGAGAGTTGCTAATTCTCCAATTCAATCTACTGGCTGTAAAGTTTGGCTTTCTGAATCTTCTATGGTTGCTTCTAGCTTCACCCAAGGGGCAATCGTCTCGGTAGCTGTAGCACTTAGATCTGAGGGAGGAAACAATTTAAAAGGTTTTTCTCTTTCCTCATTAGCAGATGAATGTGGTAGGCACTTCGGGATTGATTATGGAGATTCATTAATCAATGAAGCGGGAAATTACTTTGCTCTTGCGAGAATTTTCTCTTGTAGTAAGGAGTTAAATGACGGAGTGCAATTATCAACAAACCTCTCGTACACCTTGGGTTGGCCTGCAATAGGCCGTGTTGTGTTTATCTCCCCTTTAAAAAATAACCTATGCAATGGCCCATTAAATGAAAATCAGAAATTCAAGAGCACAGAAGTTGAATCTCTGAAAATAAACAACTGTAAGGAACTGTTCCTGGAGCTAGCTTCTTCAACCAATATATCAGCAAAAGACAACTTATTCTCTTCCTCAACTATTGGTTCTAGGAAGGTTCATGGTTATGGTGAAAATGGTAATTTAGCGTCCCCGAGCACTGTGTTATCTACATCTCCTACATGTGATGACGTGGTATCGAATTTACTTATAGAGAGTCCATGTGCTCATTCATTTATTAAGGAGGCCTTAGGAGATGACAGTGTCAAAATTTTTTTGCAGACAATTGCTTCCAATGAGTTATATAAACGTTGTTTGCTGCGTGGTAATCTTGTAACTATCCCAGTGCTTTCAGATCTTTGTACATTCCATGTGAGGGGTGGTAAAGGACCGTCGACATATAACAACTCTTATGATTCTATGCACAATGGAAGCAGCCATCATGTTCAAATTTTGTACCAGCTGACAAAAGTATTTATAAATGTTCAATCAACCACGGTCTCGGAGACAGTGCAAGAAAGCGTTCCATCAAATGTGGAACCTCAAAATCTAAATATTAGAGCTAAAGTAAAGAGTGAAGTTTGGAAACTAGGCGGTCTTTCTAAAGAATATTCAGTTTTGAAGGATATTATAAATGCCTCATCTTTAAGTAGCACCGTGTCAAGCCTTGGTTTACGAACCACAAAGGGAGTACTTCTTCATGGTCCTCCTGGTACTGGAAAAACTTCCTTGGCTCAATTATGTGCTCATGACGCTGGTGTCAATTTATTCTATTTGAATGGACCTGAAATTATAAGTCAATATCATGGGGAAAGTGAACAGGCCTTGTATGAAGTTTTCGAGATGGCAAGCCAAGATGCACCTGCTGTGCTAGTTAATTTACCTAACTTTTATAATCTATTAATTGATGAGTTGGATGCTATTGCACCTGCAAGAAAAGATGGAGGTGAAGAGTTGTCTCAAAGAATTGTTGCTACATTGCTTAATCTGATGGATGGGATCAACCGAACTGGTGGGCAACTTGTAATTGCTTCTACCAACCGGCCTGATAGCATTGAGCCTGCACTAAGTCTAAGGCGACCTGGGAGACTTGACCGGGAAATTGAAATAGGTGTGCCATCTCCCAATCAACGGTTGGATATTCTTCATACAATACTAAGTGAAATGGAGCATTCTCTTTCAGACCTGCAAGTTCAGCATCTAGCTATGGTTACACATGGTTTTGTGGGTGCTGATTTGGCTGCCCTTTGCAATGAGGCTGCCTTAGTTTGTATAAGGCGTTATCACGAGTTTAAAGTTTCTACTGATTGCCTTAGTTCTGGTAGATCTATTATTGCAGAGGAACAACGTAAGTTTACCATGGTGGATCACGAAGCCAATGTTGATGATATGATTTTGGAACCTGTTCTCTCAAAAGATGCAAGAACTATGTTAGGAGTTTGCTCAAACCTTTCGTCTTCATCATTCTCTAAATGTACTTCTACATCTGAGGCTCTAACATGTGTGTCCTCGAGTGAAGTGATTGTTTTTGAAGATTTTGAGATGGCCAGAATGAAAGTGAGGCCTAGTGCCATGCGAGAGGTCATACTTGAGGTTCCAAGGGTAAAATGGGAAGATATTGGTGGACAAAGGGAGGTTAAGGTTCAATTAATGGAAGCAGTGGAATGGCCTCAAAAACATCAGGAGGCATTCAAGCGAATAGGGACTCGACCTCCAACAGGAGTGTTAATGTTTGGTCCACCTGGATGTAGCAAAACTCTCATGGCACGTGCAGTAGCTTCTGAAGCAGGACTAAATTTCCTTGCAGTAAAGGGCCCAGAACTTTTCAGTAAATGGGTTGAGCTAATGCACCATCAATCATATTTTTTTGATGAAATTGATGGTCTTGCTGTCATTCGCGGGAAGGAAAGTGATGGGATTTCTGTCTCTGATAGAGTTATGAGTCAACTTCTTGTTGAATTGGATGGTTTACATCAGAGAGTTGGTGTTACTGTCATTGCAGCTACCAATCGGCTGGATAAAATTGATTCTGCCCTTCTAAGGCCAGGACGTTTTGATCGGTTGCTATATGTTGGGCCTCCGAGTGAATCTGAACGAGAAGAGATATTTCAAATCCATTTGTGCAAAATTCCTTGCAGCCCAGATGTCAGCACGAGGAAGTTGGCTTCTCTTGCTCAAGGCTGTACAGGGGCTGACATATCATTAATCTGCAGAGAAGCAGCTTTATTTGCCCTTGAGGAGAACCTTGAGGTTTCAAAAATAAATATGCAACATTTAGAAACTGCTGTTAGACACGTGAAGCCATCTGCAACTGAACCTTATCAAGAATTATCATCTAGGTTTCAAAGGCTTGTGTGTTCTAGCTCACAAGGAGCTAATGTAGTGTGTCAGCAGTCACGATCTAACTGGTTTTCTATTTGGTGA | 2988 | 40.96 | MPSKGKKNSTTLSRLSNSSHSQSPLPRLAIPPASEVCDDEFLSSIEKSAFIGRVANSPIQSTGCKVWLSESSMVASSFTQGAIVSVAVALRSEGGNNLKGFSLSSLADECGRHFGIDYGDSLINEAGNYFALARIFSCSKELNDGVQLSTNLSYTLGWPAIGRVVFISPLKNNLCNGPLNENQKFKSTEVESLKINNCKELFLELASSTNISAKDNLFSSSTIGSRKVHGYGENGNLASPSTVLSTSPTCDDVVSNLLIESPCAHSFIKEALGDDSVKIFLQTIASNELYKRCLLRGNLVTIPVLSDLCTFHVRGGKGPSTYNNSYDSMHNGSSHHVQILYQLTKVFINVQSTTVSETVQESVPSNVEPQNLNIRAKVKSEVWKLGGLSKEYSVLKDIINASSLSSTVSSLGLRTTKGVLLHGPPGTGKTSLAQLCAHDAGVNLFYLNGPEIISQYHGESEQALYEVFEMASQDAPAVLVNLPNFYNLLIDELDAIAPARKDGGEELSQRIVATLLNLMDGINRTGGQLVIASTNRPDSIEPALSLRRPGRLDREIEIGVPSPNQRLDILHTILSEMEHSLSDLQVQHLAMVTHGFVGADLAALCNEAALVCIRRYHEFKVSTDCLSSGRSIIAEEQRKFTMVDHEANVDDMILEPVLSKDARTMLGVCSNLSSSSFSKCTSTSEALTCVSSSEVIVFEDFEMARMKVRPSAMREVILEVPRVKWEDIGGQREVKVQLMEAVEWPQKHQEAFKRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVELMHHQSYFFDEIDGLAVIRGKESDGISVSDRVMSQLLVELDGLHQRVGVTVIAATNRLDKIDSALLRPGRFDRLLYVGPPSESEREEIFQIHLCKIPCSPDVSTRKLASLAQGCTGADISLICREAALFALEENLEVSKINMQHLETAVRHVKPSATEPYQELSSRFQRLVCSSSQGANVVCQQSRSNWFSIW | 995 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 47556560 | 47567170 | - | Tan0019607.2 | Tan09g0521 | 762864 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g0521 | 995 | FunFam | Putative vesicular transport protein (CDC48) | 370 | 559 | - | - | |
Tan09g0521 | 995 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 721 | 964 | IPR027417 | - | |
Tan09g0521 | 995 | Gene3D | - | 365 | 559 | IPR027417 | - | |
Tan09g0521 | 995 | Pfam | ATPase family associated with various cellular activities (AAA) | 419 | 559 | IPR003959 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
Tan09g0521 | 995 | Pfam | ATPase family associated with various cellular activities (AAA) | 763 | 880 | IPR003959 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
Tan09g0521 | 995 | PANTHER | AAA-FAMILY ATPASE | 55 | 969 | IPR050168 | GO:0005737(PANTHER)|GO:0009507(PANTHER)|GO:0016887(PANTHER) | |
Tan09g0521 | 995 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Tan09g0521 | 995 | Gene3D | - | 560 | 666 | - | - | |
Tan09g0521 | 995 | FunFam | spermatogenesis-associated protein 5-like protein 1 | 882 | 966 | - | - | |
Tan09g0521 | 995 | FunFam | calmodulin-interacting protein 111 isoform X1 | 720 | 881 | - | - | |
Tan09g0521 | 995 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 385 | 615 | IPR027417 | - | |
Tan09g0521 | 995 | SMART | AAA_5 | 415 | 562 | IPR003593 | GO:0016887(InterPro) | |
Tan09g0521 | 995 | SMART | AAA_5 | 759 | 883 | IPR003593 | GO:0016887(InterPro) | |
Tan09g0521 | 995 | Pfam | AAA+ lid domain | 583 | 625 | IPR041569 | - | |
Tan09g0521 | 995 | Pfam | AAA+ lid domain | 903 | 948 | IPR041569 | - | |
Tan09g0521 | 995 | Gene3D | - | 882 | 965 | - | - | |
Tan09g0521 | 995 | Gene3D | - | 709 | 880 | IPR027417 | - | |
Tan09g0521 | 995 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Tan09g0521 | 995 | ProSitePatterns | AAA-protein family signature. | 851 | 869 | IPR003960 | GO:0005524(InterPro)|GO:0016887(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan09g0521 | Tan-Chr9:47556560 | Tan09g2280 | Tan-Chr9:72756265 | 2.20E-105 | dispersed | |
Tan09g0520 | Tan-Chr9:47555231 | Tan09g0521 | Tan-Chr9:47556560 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g0521 | - | - | - | 0.0 |