Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0521 ATGCCTTCAAAGGGAAAGAAGAACTCAACGACACTTTCTAGATTGTCAAACTCGAGCCACTCTCAATCTCCACTGCCACGATTGGCAATACCTCCTGCCTCTGAAGTTTGTGATGATGAATTTCTTTCCTCTATTGAAAAATCTGCTTTCATTGGGAGAGTTGCTAATTCTCCAATTCAATCTACTGGCTGTAAAGTTTGGCTTTCTGAATCTTCTATGGTTGCTTCTAGCTTCACCCAAGGGGCAATCGTCTCGGTAGCTGTAGCACTTAGATCTGAGGGAGGAAACAATTTAAAAGGTTTTTCTCTTTCCTCATTAGCAGATGAATGTGGTAGGCACTTCGGGATTGATTATGGAGATTCATTAATCAATGAAGCGGGAAATTACTTTGCTCTTGCGAGAATTTTCTCTTGTAGTAAGGAGTTAAATGACGGAGTGCAATTATCAACAAACCTCTCGTACACCTTGGGTTGGCCTGCAATAGGCCGTGTTGTGTTTATCTCCCCTTTAAAAAATAACCTATGCAATGGCCCATTAAATGAAAATCAGAAATTCAAGAGCACAGAAGTTGAATCTCTGAAAATAAACAACTGTAAGGAACTGTTCCTGGAGCTAGCTTCTTCAACCAATATATCAGCAAAAGACAACTTATTCTCTTCCTCAACTATTGGTTCTAGGAAGGTTCATGGTTATGGTGAAAATGGTAATTTAGCGTCCCCGAGCACTGTGTTATCTACATCTCCTACATGTGATGACGTGGTATCGAATTTACTTATAGAGAGTCCATGTGCTCATTCATTTATTAAGGAGGCCTTAGGAGATGACAGTGTCAAAATTTTTTTGCAGACAATTGCTTCCAATGAGTTATATAAACGTTGTTTGCTGCGTGGTAATCTTGTAACTATCCCAGTGCTTTCAGATCTTTGTACATTCCATGTGAGGGGTGGTAAAGGACCGTCGACATATAACAACTCTTATGATTCTATGCACAATGGAAGCAGCCATCATGTTCAAATTTTGTACCAGCTGACAAAAGTATTTATAAATGTTCAATCAACCACGGTCTCGGAGACAGTGCAAGAAAGCGTTCCATCAAATGTGGAACCTCAAAATCTAAATATTAGAGCTAAAGTAAAGAGTGAAGTTTGGAAACTAGGCGGTCTTTCTAAAGAATATTCAGTTTTGAAGGATATTATAAATGCCTCATCTTTAAGTAGCACCGTGTCAAGCCTTGGTTTACGAACCACAAAGGGAGTACTTCTTCATGGTCCTCCTGGTACTGGAAAAACTTCCTTGGCTCAATTATGTGCTCATGACGCTGGTGTCAATTTATTCTATTTGAATGGACCTGAAATTATAAGTCAATATCATGGGGAAAGTGAACAGGCCTTGTATGAAGTTTTCGAGATGGCAAGCCAAGATGCACCTGCTGTGCTAGTTAATTTACCTAACTTTTATAATCTATTAATTGATGAGTTGGATGCTATTGCACCTGCAAGAAAAGATGGAGGTGAAGAGTTGTCTCAAAGAATTGTTGCTACATTGCTTAATCTGATGGATGGGATCAACCGAACTGGTGGGCAACTTGTAATTGCTTCTACCAACCGGCCTGATAGCATTGAGCCTGCACTAAGTCTAAGGCGACCTGGGAGACTTGACCGGGAAATTGAAATAGGTGTGCCATCTCCCAATCAACGGTTGGATATTCTTCATACAATACTAAGTGAAATGGAGCATTCTCTTTCAGACCTGCAAGTTCAGCATCTAGCTATGGTTACACATGGTTTTGTGGGTGCTGATTTGGCTGCCCTTTGCAATGAGGCTGCCTTAGTTTGTATAAGGCGTTATCACGAGTTTAAAGTTTCTACTGATTGCCTTAGTTCTGGTAGATCTATTATTGCAGAGGAACAACGTAAGTTTACCATGGTGGATCACGAAGCCAATGTTGATGATATGATTTTGGAACCTGTTCTCTCAAAAGATGCAAGAACTATGTTAGGAGTTTGCTCAAACCTTTCGTCTTCATCATTCTCTAAATGTACTTCTACATCTGAGGCTCTAACATGTGTGTCCTCGAGTGAAGTGATTGTTTTTGAAGATTTTGAGATGGCCAGAATGAAAGTGAGGCCTAGTGCCATGCGAGAGGTCATACTTGAGGTTCCAAGGGTAAAATGGGAAGATATTGGTGGACAAAGGGAGGTTAAGGTTCAATTAATGGAAGCAGTGGAATGGCCTCAAAAACATCAGGAGGCATTCAAGCGAATAGGGACTCGACCTCCAACAGGAGTGTTAATGTTTGGTCCACCTGGATGTAGCAAAACTCTCATGGCACGTGCAGTAGCTTCTGAAGCAGGACTAAATTTCCTTGCAGTAAAGGGCCCAGAACTTTTCAGTAAATGGGTTGAGCTAATGCACCATCAATCATATTTTTTTGATGAAATTGATGGTCTTGCTGTCATTCGCGGGAAGGAAAGTGATGGGATTTCTGTCTCTGATAGAGTTATGAGTCAACTTCTTGTTGAATTGGATGGTTTACATCAGAGAGTTGGTGTTACTGTCATTGCAGCTACCAATCGGCTGGATAAAATTGATTCTGCCCTTCTAAGGCCAGGACGTTTTGATCGGTTGCTATATGTTGGGCCTCCGAGTGAATCTGAACGAGAAGAGATATTTCAAATCCATTTGTGCAAAATTCCTTGCAGCCCAGATGTCAGCACGAGGAAGTTGGCTTCTCTTGCTCAAGGCTGTACAGGGGCTGACATATCATTAATCTGCAGAGAAGCAGCTTTATTTGCCCTTGAGGAGAACCTTGAGGTTTCAAAAATAAATATGCAACATTTAGAAACTGCTGTTAGACACGTGAAGCCATCTGCAACTGAACCTTATCAAGAATTATCATCTAGGTTTCAAAGGCTTGTGTGTTCTAGCTCACAAGGAGCTAATGTAGTGTGTCAGCAGTCACGATCTAACTGGTTTTCTATTTGGTGA 2988 40.96 MPSKGKKNSTTLSRLSNSSHSQSPLPRLAIPPASEVCDDEFLSSIEKSAFIGRVANSPIQSTGCKVWLSESSMVASSFTQGAIVSVAVALRSEGGNNLKGFSLSSLADECGRHFGIDYGDSLINEAGNYFALARIFSCSKELNDGVQLSTNLSYTLGWPAIGRVVFISPLKNNLCNGPLNENQKFKSTEVESLKINNCKELFLELASSTNISAKDNLFSSSTIGSRKVHGYGENGNLASPSTVLSTSPTCDDVVSNLLIESPCAHSFIKEALGDDSVKIFLQTIASNELYKRCLLRGNLVTIPVLSDLCTFHVRGGKGPSTYNNSYDSMHNGSSHHVQILYQLTKVFINVQSTTVSETVQESVPSNVEPQNLNIRAKVKSEVWKLGGLSKEYSVLKDIINASSLSSTVSSLGLRTTKGVLLHGPPGTGKTSLAQLCAHDAGVNLFYLNGPEIISQYHGESEQALYEVFEMASQDAPAVLVNLPNFYNLLIDELDAIAPARKDGGEELSQRIVATLLNLMDGINRTGGQLVIASTNRPDSIEPALSLRRPGRLDREIEIGVPSPNQRLDILHTILSEMEHSLSDLQVQHLAMVTHGFVGADLAALCNEAALVCIRRYHEFKVSTDCLSSGRSIIAEEQRKFTMVDHEANVDDMILEPVLSKDARTMLGVCSNLSSSSFSKCTSTSEALTCVSSSEVIVFEDFEMARMKVRPSAMREVILEVPRVKWEDIGGQREVKVQLMEAVEWPQKHQEAFKRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVELMHHQSYFFDEIDGLAVIRGKESDGISVSDRVMSQLLVELDGLHQRVGVTVIAATNRLDKIDSALLRPGRFDRLLYVGPPSESEREEIFQIHLCKIPCSPDVSTRKLASLAQGCTGADISLICREAALFALEENLEVSKINMQHLETAVRHVKPSATEPYQELSSRFQRLVCSSSQGANVVCQQSRSNWFSIW 995
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 47556560 47567170 - Tan0019607.2 Tan09g0521 762864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0521 995 FunFam Putative vesicular transport protein (CDC48) 370 559 - -
Tan09g0521 995 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 721 964 IPR027417 -
Tan09g0521 995 Gene3D - 365 559 IPR027417 -
Tan09g0521 995 Pfam ATPase family associated with various cellular activities (AAA) 419 559 IPR003959 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan09g0521 995 Pfam ATPase family associated with various cellular activities (AAA) 763 880 IPR003959 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan09g0521 995 PANTHER AAA-FAMILY ATPASE 55 969 IPR050168 GO:0005737(PANTHER)|GO:0009507(PANTHER)|GO:0016887(PANTHER)
Tan09g0521 995 MobiDBLite consensus disorder prediction 1 29 - -
Tan09g0521 995 Gene3D - 560 666 - -
Tan09g0521 995 FunFam spermatogenesis-associated protein 5-like protein 1 882 966 - -
Tan09g0521 995 FunFam calmodulin-interacting protein 111 isoform X1 720 881 - -
Tan09g0521 995 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 385 615 IPR027417 -
Tan09g0521 995 SMART AAA_5 415 562 IPR003593 GO:0016887(InterPro)
Tan09g0521 995 SMART AAA_5 759 883 IPR003593 GO:0016887(InterPro)
Tan09g0521 995 Pfam AAA+ lid domain 583 625 IPR041569 -
Tan09g0521 995 Pfam AAA+ lid domain 903 948 IPR041569 -
Tan09g0521 995 Gene3D - 882 965 - -
Tan09g0521 995 Gene3D - 709 880 IPR027417 -
Tan09g0521 995 MobiDBLite consensus disorder prediction 1 25 - -
Tan09g0521 995 ProSitePatterns AAA-protein family signature. 851 869 IPR003960 GO:0005524(InterPro)|GO:0016887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0521 Tan-Chr9:47556560 Tan09g2280 Tan-Chr9:72756265 2.20E-105 dispersed
Tan09g0520 Tan-Chr9:47555231 Tan09g0521 Tan-Chr9:47556560 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0521 - - - 0.0