Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g0529 | ATGGCCGGAATCCCCTCTGAGGGGTTGGGGGATGATTTTTTCGAGCAGATTTTGGCGGTGCCACCGGCTTACGGCGGCGGCGATGTGGTGTCTATGCCTATGGCGATGGGGTTGCAACTTTGCTCCGGCGGCGACGGTGGGTTGCAGCAAGGAGGGATGGCTATGCCTTTGGGATTGAATTTAGAACAAGGGTTTTTGAGACAAGAGAGGTTTAGAGATGAGCTTGATGCTCATAATAATAATAATAATAATAATGCTTCCTCTTCTTCAACTGCTTCTTCAGGAATCACTGAGAGAGATTCTTCGGTTCAGCACATGACCAACTTGTTTCCGACCTTTGGACATTTGCAGACTCAGCCACTCCGCCCACCGCCGCCGTTACATCTCCACCAGCCCTTTCACAATCAGACGACTCCCGGGATGGTTGCTGCGATACCGCAACCACCTCAAGTTCGTCCGAGAGTTCGAGCAAGACGTGGCCAGGCGACCGATCCTCACAGTATTGCAGAAAGGTTGCGTCGAGAAAGAATTGCAGAAAGAATGAAGGCTTTGCAGGAGTTGGTTCCTAGTTGCAACAAGACTGATAGAGCGGCAATGCTCGACGAAATTGTGGATTATGTAAAGTTTCTTAGGCTTCAAGTTAAGGTTTTAAGCATGAGCAGACTAGGCGGGGCAGGTGCGGTGGCTCAACTTGTGGCCGATGTGCCCTTATCATCAGTCGAGGGAGAAGGCATGGAGAGTGGCAACAATCAGCAAGCATGGGAAAAGTGGTCAAGTGATGGCACAGAGCAACAAGTAGCCAAATTGATGGAAGAAGATGTAGGAGCTGCCATGCAATTCCTACAATCTAAAGCTCTATGCATCATGCCCATCTCATTAGCCTCAGCCATTTTCAGGACACACCAAGCAGATCCACCAATCATAGTCAAGCCAGAAATGAACACTCCCTAG | 951 | 49.63 | MAGIPSEGLGDDFFEQILAVPPAYGGGDVVSMPMAMGLQLCSGGDGGLQQGGMAMPLGLNLEQGFLRQERFRDELDAHNNNNNNNASSSSTASSGITERDSSVQHMTNLFPTFGHLQTQPLRPPPPLHLHQPFHNQTTPGMVAAIPQPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSSVEGEGMESGNNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRTHQADPPIIVKPEMNTP | 316 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 48153103 | 48163766 | + | Tan0003693.1 | Tan09g0529 | 762872 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g0529 | 316 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 57 | 295 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Tan09g0529 | 316 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 161 | 210 | IPR011598 | GO:0046983(InterPro) | |
Tan09g0529 | 316 | MobiDBLite | consensus disorder prediction | 76 | 99 | - | - | |
Tan09g0529 | 316 | SMART | finulus | 167 | 216 | IPR011598 | GO:0046983(InterPro) | |
Tan09g0529 | 316 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 159 | 220 | IPR036638 | GO:0046983(InterPro) | |
Tan09g0529 | 316 | MobiDBLite | consensus disorder prediction | 144 | 165 | - | - | |
Tan09g0529 | 316 | MobiDBLite | consensus disorder prediction | 78 | 99 | - | - | |
Tan09g0529 | 316 | FunFam | Basic helix-loop-helix transcription factor | 156 | 218 | - | - | |
Tan09g0529 | 316 | Pfam | Helix-loop-helix DNA-binding domain | 166 | 211 | IPR011598 | GO:0046983(InterPro) | |
Tan09g0529 | 316 | Gene3D | - | 154 | 211 | IPR036638 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g1037 | Tan-Chr6:9374203 | Tan09g0529 | Tan-Chr9:48153103 | 4.50E-73 | dispersed | |
Tan07g2333 | Tan-Chr7:74535049 | Tan09g0529 | Tan-Chr9:48153103 | 2.40E-17 | dispersed | |
Tan09g0529 | Tan-Chr9:48153103 | Tan09g1547 | Tan-Chr9:67332375 | 4.30E-47 | dispersed | |
Tan11g1862 | Tan-Chr11:23161454 | Tan09g0529 | Tan-Chr9:48153103 | 6.50E-13 | dispersed | |
Tan09g0529 | Tan-Chr9:48153103 | Tan09g0530 | Tan-Chr9:48153103 | 3.30E-124 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28284 | PF00010 | HLH | 6.90E-08 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g0529 | - | - | - | 0.0 |