Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0553 ATGAAACACATTTTCAAGAAGTTTCATATAGGAAGCAATCACGAGCCGAATCGGTCCAATGAGAATCCGTCGCCTGTAGCAGCGTCGTCGTCACCATGTGTTTCTGATAATCGTCCAGCAACTGCTCCGGGGCAGACTTCCGGCAACTCTCCGTCGAGTCCTTCGTCGTCGCCGTCGCTGGCAACAACTCCTCCAGGAGGCGGAAGCGTGACTTCGGTTTCGGTGGCTCCCAATCGGTCTGATTACTTTTCTTCAGAGGAGGAGTTTCAGGTTCAGCTTGCCCTAGCTATTAGCGCCTCGAATTCTGACTTCCGGGATGATCCAGAGAAGGATCAAATTCGAGCTGCCACGCTTTTGAGCTTGGGAAATCATCGGATTGATTCCACTGCCAGGGACCAGGGAGATGCTGCCGAGGCGCTCTCGAGGCAATATTGGGAATATAATCTGCTTGACTATGAAGAAAAAGTTGTCAATGGGTTTTATGATGTCCTCTCTACGGACTCAGCAGTCCAAGGAAAAATTCCGTCTCTATCTGATATTGAAGCAAGCTTTGGTAGTTCTGGCTTTGAAGTCGTGATGGTCAATATGACTGTTGATCCTGCACTAGAAGAGCTAGTGCAAATTGCTCAATGCATTGCAGATTGCCCTGGCACTGAGGTGAGAGTTTTGGTTCAGAGGCTTGCTGAGCTTGTTATGGGACACATGGGCGGACCTGTAAAGGATGCCAATTTTATGCTAGCAAGGTGGATGGAAAGAAGCACAGAGTTAAGGACTTCTCTTCACACCAGTGTATTGCCTATTGGTTCCATTAATATTGGCCTCTCAAGACATCGTGCATTGCTTTTCAAGGTGTTAGCTGACTGTATCAAGATGCCTTGTAGGCTTGTTAAAGGTAGTCACTATACTGGTGTTGAAGAAGACGCTGTCGACATCATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTAATGGCAGCTCCTGGAACACTTATACCAGCAGACATACTAAGTGCAAAGGACACTACTACCTTTAAGCCTTACAACCCTAAAGTAAGCAAAATTCCTTCTCTCCACTACTCCAATGATGGAATTTCTTCCACGAAACCAACACAATCACTTGAGGAAGGCAGCAGTCAAAACTTTGAAACAGAGGCCAGCTCACTGGTGGATGGGAAACTGGGCTATGGAAGGACAGAGTCTGTGCCGTCAAGCTCAGGTACTGGGACTTCTCGATACAAAGGGCCCCATTCAGGTGATAGCAATGTTAGACTGAATGTCAATGTAGTTCCATTTGGTCAAAGCTCCGACGATTCCAAAAATCTTTTTGCAGATCTTAATCCTTTCCAAATAAAAGGAACTGGAAAAAGTTTCATTCTTAACAAATCCTCTGATAATAAAATTGAGGAGCTCCAGAAACCTACTATTGGGCATCCTCCTGTTCCGTTGTGGAAAAATCGGGTTGCTTTCAATGCAGTTCCTGAGAAAAAAGAGTACAATTATATGGAGGGCCGTTTTCCAAGAATTAATCGTGGATCTAATGATCATAATATGGCATTGTCTTCTTCTTCTGCCAACTCTACTGTCTCTGAAAATGTAAATCCTGGTGGTTCAGGAGCATCCATTGACTCAAGTGTATCGATTAGGAGTGCTGAAGTTGGAAGTTCTTCATCTTATATGAACTCGCAGTCGACATCTGCCATGATTGAGCCTAATATTTTGCCATTGATTGATGAACAGAACAGAAAGCCCAATGGAGAACACTCTGGAAGTATAGACTTGCAGGATGAAAAGGTTGATGCTGTTGATGGACGTGATAATTTAATCAGATTTGATAACCGTAGAACATTCACATATGACAGACCTGTTGGGACCAACTTGATATTGAAGGATCCGGGAAGTCCCAGCCTGCTGATTGATCCAAGTTTGAATAGGTTTGAGCAAGTTTATGATGATGTGGATGTAGGCCAATGTGAAATACAATGGGAGGACCTCATTATTGGTGAAAGGATTGGACTAGGTTCATATGGAGAAGTCTACCATGCTGATTGGAATGGCACAGAGGTTGCTGTGAAGAAATTCTTAGACCAGGATTTTTCTGGCGCTGCTTTAGCTGAGTTCAAAAGAGAAGTACTGATAATGCGGCAGCTACGTCATCCAAATATTGTTCTTTTTATGGGTGCAGTCACTCGTCCTCCTAACCTTTCCATTGTTACCGAGTTTCTTCCCAGAGGAAGCTTGTACCGGATCATTCACCGCCCACATTGTCAAATTGATGAAAAGCGCAGAATAAAAATGGCCCTTGATGTGGCAAGGGGCATGAATTGCTTGCATGCAAGTAATCCAACAATTGTTCACCGAGATCTGAAGTCACCGAATCTTTTGGTTGATAAGAACTGGAATGTGAAGGTATCAGATTTTGGGTTGTCACGCCTGAAGCACCACACATTTTTGTCATCCAAATCAACTGGAGGAACGCCTGAGTGGATGGCACCAGAGGTTCTCAGAAATGAGCCTTCAAATGAGAAGTGCGATGTTTATAGCTTCGGAATCATTCTATGGGAACTTGCTACATTGAGACTGCCTTGGAGTGGGATGAATCCTATGCAAGTTGTTGGTGCAGTAGGTTTCCAGAATCGACGACTCGAAATACCCAAGGAAGTGGATCCCACGGTTGCAAGGATAATCTGGGAATGCTGGCAAACCGATCCGAACTTGCGCCCCTCATTTGCACAATTAGCCAATATTCTGAAGCCACTGCAGCGACTCGTCCTGCCACCACATTCAGACCAGCCGAGTTCATCGGTGCTGCAAGAGATTTCTGTAAATTCTTCACCTTGA 2841 44.77 MKHIFKKFHIGSNHEPNRSNENPSPVAASSSPCVSDNRPATAPGQTSGNSPSSPSSSPSLATTPPGGGSVTSVSVAPNRSDYFSSEEEFQVQLALAISASNSDFRDDPEKDQIRAATLLSLGNHRIDSTARDQGDAAEALSRQYWEYNLLDYEEKVVNGFYDVLSTDSAVQGKIPSLSDIEASFGSSGFEVVMVNMTVDPALEELVQIAQCIADCPGTEVRVLVQRLAELVMGHMGGPVKDANFMLARWMERSTELRTSLHTSVLPIGSINIGLSRHRALLFKVLADCIKMPCRLVKGSHYTGVEEDAVDIIKLEDEREFLVDLMAAPGTLIPADILSAKDTTTFKPYNPKVSKIPSLHYSNDGISSTKPTQSLEEGSSQNFETEASSLVDGKLGYGRTESVPSSSGTGTSRYKGPHSGDSNVRLNVNVVPFGQSSDDSKNLFADLNPFQIKGTGKSFILNKSSDNKIEELQKPTIGHPPVPLWKNRVAFNAVPEKKEYNYMEGRFPRINRGSNDHNMALSSSSANSTVSENVNPGGSGASIDSSVSIRSAEVGSSSSYMNSQSTSAMIEPNILPLIDEQNRKPNGEHSGSIDLQDEKVDAVDGRDNLIRFDNRRTFTYDRPVGTNLILKDPGSPSLLIDPSLNRFEQVYDDVDVGQCEIQWEDLIIGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALAEFKREVLIMRQLRHPNIVLFMGAVTRPPNLSIVTEFLPRGSLYRIIHRPHCQIDEKRRIKMALDVARGMNCLHASNPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHHTFLSSKSTGGTPEWMAPEVLRNEPSNEKCDVYSFGIILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEVDPTVARIIWECWQTDPNLRPSFAQLANILKPLQRLVLPPHSDQPSSSVLQEISVNSSP 946
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 49097452 49119182 - Tan0000399.1 Tan09g0553 762896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0553 946 MobiDBLite consensus disorder prediction 359 423 - -
Tan09g0553 946 Gene3D Transferase(Phosphotransferase) domain 1 744 924 - -
Tan09g0553 946 FunFam Serine/threonine-protein kinase isoform 1 656 743 - -
Tan09g0553 946 Pfam Protein tyrosine and serine/threonine kinase 667 916 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0553 946 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524(InterPro)
Tan09g0553 946 ProSiteProfiles Protein kinase domain profile. 665 921 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0553 946 Gene3D Phosphorylase Kinase; domain 1 658 742 - -
Tan09g0553 946 PRINTS Tyrosine kinase catalytic domain signature 825 835 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0553 946 PRINTS Tyrosine kinase catalytic domain signature 778 796 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0553 946 PRINTS Tyrosine kinase catalytic domain signature 844 866 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0553 946 PRINTS Tyrosine kinase catalytic domain signature 888 910 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0553 946 PRINTS Tyrosine kinase catalytic domain signature 739 752 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0553 946 SMART serkin_6 665 920 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0553 946 MobiDBLite consensus disorder prediction 518 543 - -
Tan09g0553 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0553 946 FunFam PAS domain-containing protein tyrosine kinase family protein 743 930 - -
Tan09g0553 946 MobiDBLite consensus disorder prediction 1 73 - -
Tan09g0553 946 SUPERFAMILY Protein kinase-like (PK-like) 656 934 IPR011009 -
Tan09g0553 946 MobiDBLite consensus disorder prediction 399 423 - -
Tan09g0553 946 MobiDBLite consensus disorder prediction 15 73 - -
Tan09g0553 946 PANTHER SERINE-THREONINE PROTEIN KINASE 72 918 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan09g0553 946 MobiDBLite consensus disorder prediction 359 387 - -
Tan09g0553 946 CDD STKc_MAP3K-like 671 917 - -
Tan09g0553 946 Pfam Ethylene-responsive protein kinase Le-CTR1 137 332 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2200 Tan-Chr5:72948055 Tan09g0553 Tan-Chr9:49097452 9.50E-165 dispersed
Tan05g2201 Tan-Chr5:72948055 Tan09g0553 Tan-Chr9:49097452 6.90E-157 dispersed
Tan06g2766 Tan-Chr6:79887293 Tan09g0553 Tan-Chr9:49097452 1.70E-80 dispersed
Tan06g2767 Tan-Chr6:79887293 Tan09g0553 Tan-Chr9:49097452 1.40E-80 dispersed
Tan08g1774 Tan-Chr8:69733366 Tan09g0553 Tan-Chr9:49097452 1.30E-127 dispersed
Tan08g1775 Tan-Chr8:69733366 Tan09g0553 Tan-Chr9:49097452 1.30E-127 dispersed
Tan09g0553 Tan-Chr9:49097452 Tan11g1154 Tan-Chr11:9196209 1.00E-56 dispersed
Tan09g0553 Tan-Chr9:49097452 Tan09g0554 Tan-Chr9:49097452 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68021 PF07714 PK_Tyr_Ser-Thr 7.30E-63 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0553 - - - 0.0