Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0554 ATGAAACACATTTTCAAGAAGTTTCATATAGGAAGCAATCACGAGCCGAATCGGTCCAATGAGAATCCGTCGCCTGTAGCAGCGTCGTCGTCACCATGTGTTTCTGATAATCGTCCAGCAACTGCTCCGGGGCAGACTTCCGGCAACTCTCCGTCGAGTCCTTCGTCGTCGCCGTCGCTGGCAACAACTCCTCCAGGAGGCGGAAGCGTGACTTCGGTTTCGGTGGCTCCCAATCGGTCTGATTACTTTTCTTCAGAGGAGGAGTTTCAGGTTCAGCTTGCCCTAGCTATTAGCGCCTCGAATTCTGACTTCCGGGATGATCCAGAGAAGGATCAAATTCGAGCTGCCACGCTTTTGAGCTTGGGAAATCATCGGATTGATTCCACTGCCAGGGACCAGGGAGATGCTGCCGAGGCGCTCTCGAGGCAATATTGGGAATATAATCTGCTTGACTATGAAGAAAAAGTTGTCAATGGGTTTTATGATGTCCTCTCTACGGACTCAGCAGTCCAAGGAAAAATTCCGTCTCTATCTGATATTGAAGCAAGCTTTGGTAGTTCTGGCTTTGAAGTCGTGATGGTCAATATGACTGTTGATCCTGCACTAGAAGAGCTAGTGCAAATTGCTCAATGCATTGCAGATTGCCCTGGCACTGAGGTGAGAGTTTTGGTTCAGAGGCTTGCTGAGCTTGTTATGGGACACATGGGCGGACCTGTAAAGGATGCCAATTTTATGCTAGCAAGGTGGATGGAAAGAAGCACAGAGTTAAGGACTTCTCTTCACACCAGTGTATTGCCTATTGGTTCCATTAATATTGGCCTCTCAAGACATCGTGCATTGCTTTTCAAGGTGTTAGCTGACTGTATCAAGATGCCTTGTAGGCTTGTTAAAGGTAGTCACTATACTGGTGTTGAAGAAGACGCTGTCGACATCATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTAATGGCAGCTCCTGGAACACTTATACCAGCAGACATACTAAGTGCAAAGGACACTACTACCTTTAAGCCTTACAACCCTAAAGTAAGCAAAATTCCTTCTCTCCACTACTCCAATGATGGAATTTCTTCCACGAAACCAACACAATCACTTGAGGAAGGCAGCAGTCAAAACTTTGAAACAGAGGCCAGCTCACTGGTGGATGGGAAACTGGGCTATGGAAGGACAGAGTCTGTGCCGTCAAGCTCAGGTACTGGGACTTCTCGATACAAAGGGCCCCATTCAGGTGATAGCAATGTTAGACTGAATGTCAATGTAGTTCCATTTGGTCAAAGCTCCGACGATTCCAAAAATCTTTTTGCAGATCTTAATCCTTTCCAAATAAAAGGAACTGGAAAAAGTTTCATTCTTAACAAATCCTCTGATAATAAAATTGAGGAGCTCCAGAAACCTACTATTGGGCATCCTCCTGTTCCGTTGTGGAAAAATCGGGTTGCTTTCAATGCAGTTCCTGAGAAAAAAGAGTACAATTATATGGAGGGCCGTTTTCCAAGAATTAATCGTGGATCTAATGATCATAATATGGCATTGTCTTCTTCTTCTGCCAACTCTACTGTCTCTGAAAATGTAAATCCTGGTGGTTCAGGAGCATCCATTGACTCAAGTGTATCGATTAGGAGTGCTGAAGTTGGAAGTTCTTCATCTTATATGAACTCGCAGTCGACATCTGCCATGATTGAGCCTAATATTTTGCCATTGATTGATGAACAGAACAGAAAGCCCAATGGAGAACACTCTGGAAGTATAGACTTGCAGGATGAAAAGGTTGATGCTGTTGATGGACGTGATAATTTAATCAGATTTGATAACCGTAGAACATTCACATATGACAGACCTGTTGGGACCAACTTGATATTGAAGGATCCGGGAAGTCCCAGCCTGCTGATTGATCCAAGTTTGAATAGGTTTGAGCAAGTTTATGATGATGTGGATGTAGGCCAATGTGAAATACAATGGGAGGACCTCATTATTGGTGAAAGGATTGGACTAGGTTCATATGGAGAAGTCTACCATGCTGATTGGAATGGCACAGAGGTTGCTGTGAAGAAATTCTTAGACCAGGATTTTTCTGGCGCTGCTTTAGCTGAGTTCAAAAGAGAAGTACTGATAATGCGGCAGCTACGTCATCCAAATATTGTTCTTTTTATGGGTGCAGTCACTCGTCCTCCTAACCTTTCCATTGTTACCGAGTTTCTTCCCAGAGGAAGCTTGTACCGGATCATTCACCGCCCACATTGTCAAATTGATGAAAAGCGCAGAATAAAAATGGCCCTTGATGTGGCAAGGGGCATGAATTGCTTGCATGCAAGTAATCCAACAATTGTTCACCGAGATCTGAAGTCACCGAATCTTTTGGTTGATAAGAACTGGAATGTGAAGGTATCAGATTTTGGGTTGTCACGCCTGAAGCACCACACATTTTTGTCATCCAAATCAACTGGAGGAACGCCTGAGTGGATGGCACCAGAGGTTCTCAGAAATGAGCCTTCAAATGAGAAGTAA 2532 44.31 MKHIFKKFHIGSNHEPNRSNENPSPVAASSSPCVSDNRPATAPGQTSGNSPSSPSSSPSLATTPPGGGSVTSVSVAPNRSDYFSSEEEFQVQLALAISASNSDFRDDPEKDQIRAATLLSLGNHRIDSTARDQGDAAEALSRQYWEYNLLDYEEKVVNGFYDVLSTDSAVQGKIPSLSDIEASFGSSGFEVVMVNMTVDPALEELVQIAQCIADCPGTEVRVLVQRLAELVMGHMGGPVKDANFMLARWMERSTELRTSLHTSVLPIGSINIGLSRHRALLFKVLADCIKMPCRLVKGSHYTGVEEDAVDIIKLEDEREFLVDLMAAPGTLIPADILSAKDTTTFKPYNPKVSKIPSLHYSNDGISSTKPTQSLEEGSSQNFETEASSLVDGKLGYGRTESVPSSSGTGTSRYKGPHSGDSNVRLNVNVVPFGQSSDDSKNLFADLNPFQIKGTGKSFILNKSSDNKIEELQKPTIGHPPVPLWKNRVAFNAVPEKKEYNYMEGRFPRINRGSNDHNMALSSSSANSTVSENVNPGGSGASIDSSVSIRSAEVGSSSSYMNSQSTSAMIEPNILPLIDEQNRKPNGEHSGSIDLQDEKVDAVDGRDNLIRFDNRRTFTYDRPVGTNLILKDPGSPSLLIDPSLNRFEQVYDDVDVGQCEIQWEDLIIGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALAEFKREVLIMRQLRHPNIVLFMGAVTRPPNLSIVTEFLPRGSLYRIIHRPHCQIDEKRRIKMALDVARGMNCLHASNPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHHTFLSSKSTGGTPEWMAPEVLRNEPSNEK 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 49097452 49119182 - Tan0000399.2 Tan09g0554 762897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0554 843 MobiDBLite consensus disorder prediction 359 423 - -
Tan09g0554 843 ProSiteProfiles Protein kinase domain profile. 665 843 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0554 843 CDD STKc_MAP3K-like 671 843 - -
Tan09g0554 843 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524(InterPro)
Tan09g0554 843 Pfam Protein tyrosine and serine/threonine kinase 667 838 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0554 843 PANTHER SERINE-THREONINE PROTEIN KINASE 72 843 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan09g0554 843 MobiDBLite consensus disorder prediction 518 543 - -
Tan09g0554 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0554 843 Gene3D Phosphorylase Kinase; domain 1 658 742 - -
Tan09g0554 843 MobiDBLite consensus disorder prediction 1 73 - -
Tan09g0554 843 FunFam Serine/threonine-protein kinase isoform 1 656 743 - -
Tan09g0554 843 MobiDBLite consensus disorder prediction 399 423 - -
Tan09g0554 843 MobiDBLite consensus disorder prediction 15 73 - -
Tan09g0554 843 MobiDBLite consensus disorder prediction 359 387 - -
Tan09g0554 843 SUPERFAMILY Protein kinase-like (PK-like) 655 839 IPR011009 -
Tan09g0554 843 Gene3D Transferase(Phosphotransferase) domain 1 744 843 - -
Tan09g0554 843 SMART serkin_6 665 842 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0554 843 Pfam Ethylene-responsive protein kinase Le-CTR1 137 332 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0554 Tan-Chr9:49097452 Tan01g2353 Tan-Chr1:28329619 2.70E-40 dispersed
Tan09g0553 Tan-Chr9:49097452 Tan09g0554 Tan-Chr9:49097452 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68022 PF14381 EDR1 9.00E-71 CL0125 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0554 - - - 0.0