Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0563 ATGGAGGCTTGTTCTTCTCCATTCCATACTCTCTCACTCATCCTCTTCCTTTCTCTATTTCATCAACAATTCCTCTGCCAACAGTCGTATTTGGGAAACGAAACCAGTTGCTCTATCAATAACACAGCTTCAACTCATCCAAAAGAATATGTTTGCACTGATTCTATTTACTCATGTGATTCCTATTTGGCTTTCCCTTTCGATCCTTTCTTTAATGACTTTTTTTACTTCAATATAACATTAGGGAATCAAAATTTGTCCATTATTCACATTCGATGTTCTTGTTTGGGTTATTTCTATCATTACGTCATTTCTTACACTATCAAGAGTGGTGATAGTTATGAAAAGATAGCGAATGATATTTTTAAAGGACTGACAAGCTGTTCAACGTTGAAAAATATGAATGATGACTATCCTATTAATAATACTTCTGCGATTGGTAGAACACTCGAAGTTCCATTGCGATGTGCTTGCCCCACCAAAGCTCAGAACGCTACGGGAATTGAGTCCTTGGTTGTTTATATGCTGCAACTGAATGAGACCATTGAATCTGTTGCAAGGGATTTTGGGGTTCAAATAAAAAGCATCTGGGAAGCAAACGAGCTTTCGAATTCGAGCCATATCTATCCATTTACGCCTATTTTGATTCCATTGGATGGAGATGGGACTTGTAGAGTATTCCCTTATTACTGCAGAAACAAAAGTACAAGCTATTATCTTCCATTTATTTTACTATATTGCGTTTCGATTCCAATAGGTGGCATAATAACATTACTAAGTTGTTTCTTCTGCGGATGCAAAGGGCATCAAATACTATTGAAGAAAAGAAGACACAAACTTCATAAGAAAAAGTTTTTCAAGCAAAATGGTGGCCTCTTATTGCAAGAAAAACTACTTGAAGATAGTGAGAGAGTAAAAGTATTTACACAAGAAGAACTTGAAGTAGCAACAGATAACTATAACGAAAGTAGATTTCTTGGTCACGGAGGGTATGGCACAGTTTACAAAGGGACACTCCATGACGATACCATTGTTGCAATCAAAAGGTCAAAGCAAATCGAGACGAATTGGATTGAACAGTTCATTAATGAAGTTATTGTACTCTCTCAAATTAATCACAGAAATATTGTTAGGCTTTTGGGTTGTTGTTTAGAAACTGAGTTTCCTTTGCTAGTTTATGAATTTGTTTCTAACGGGACACTTTCACAACATATTCACAAGGAAGATCCTGGAGAATCACCACCTCTATCATGGGAAAATCGTCTCAGAATTGCTTCTGAAGTTGCGGGAGCTATATCTTACATGCATTCTGCAGCTTCAATTCCTATCTATCATAGAGATATCAAGTCTTTAAATATACTTTTGGATGAAAATTATAGTGCAAAAGTTTCGGATTTTGGAACATCTAGATTTGTGTCGTGTGATCAATCACATTTGACGACAAAAGTATTAGGAACTTTTGGATACATAGATCCTGAGTACTTCATATCAAGTCAATACACTGAAAAGAGTGACGTATATAGCTTTGGAGTCTTGATGATAGAACTTTTAACTGGAAAACTACCTGTCAGTTTTGCCAAAAATGATGGCCGAAACCTATTAGACTACTTCATTTTATTGGAGAAGGCTAATCAGCTCACTGAAATTCTAGATATCATAGTAGCCATGGAAGAAAAGATGGAAGTTATTAACCTTGTTGCGACACTTGCCACGAAATGCTTAAGATCAAATGGAAAAGAGAGACCGACAATGAAACAAGTATATTTGGAGCTTGAAGGATTGAGAAAGTCTCATGATTGTTCAAAAATAAGTGAAGAAATTCAATCCACTGAAACTTCTTCATCATTCTCTCTCGAGGATGGAGATGACGAGCTTACAGAATGA 1884 36.15 MEACSSPFHTLSLILFLSLFHQQFLCQQSYLGNETSCSINNTASTHPKEYVCTDSIYSCDSYLAFPFDPFFNDFFYFNITLGNQNLSIIHIRCSCLGYFYHYVISYTIKSGDSYEKIANDIFKGLTSCSTLKNMNDDYPINNTSAIGRTLEVPLRCACPTKAQNATGIESLVVYMLQLNETIESVARDFGVQIKSIWEANELSNSSHIYPFTPILIPLDGDGTCRVFPYYCRNKSTSYYLPFILLYCVSIPIGGIITLLSCFFCGCKGHQILLKKRRHKLHKKKFFKQNGGLLLQEKLLEDSERVKVFTQEELEVATDNYNESRFLGHGGYGTVYKGTLHDDTIVAIKRSKQIETNWIEQFINEVIVLSQINHRNIVRLLGCCLETEFPLLVYEFVSNGTLSQHIHKEDPGESPPLSWENRLRIASEVAGAISYMHSAASIPIYHRDIKSLNILLDENYSAKVSDFGTSRFVSCDQSHLTTKVLGTFGYIDPEYFISSQYTEKSDVYSFGVLMIELLTGKLPVSFAKNDGRNLLDYFILLEKANQLTEILDIIVAMEEKMEVINLVATLATKCLRSNGKERPTMKQVYLELEGLRKSHDCSKISEEIQSTETSSSFSLEDGDDELTE 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 50091053 50093475 + Tan0002626.1 Tan09g0563 762906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0563 627 ProSiteProfiles Protein kinase domain profile. 320 594 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0563 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0563 627 Pfam LysM domain 106 137 IPR018392 -
Tan09g0563 627 Pfam LysM domain 177 217 IPR018392 -
Tan09g0563 627 ProSiteProfiles LysM domain profile. 172 216 IPR018392 -
Tan09g0563 627 Gene3D LysM domain 160 222 IPR036779 -
Tan09g0563 627 ProSiteProfiles LysM domain profile. 104 152 IPR018392 -
Tan09g0563 627 CDD STKc_IRAK 326 594 - -
Tan09g0563 627 Gene3D Transferase(Phosphotransferase) domain 1 396 617 - -
Tan09g0563 627 SUPERFAMILY LysM domain 172 217 IPR036779 -
Tan09g0563 627 SMART LysM_2 105 153 IPR018392 -
Tan09g0563 627 SMART LysM_2 173 217 IPR018392 -
Tan09g0563 627 MobiDBLite consensus disorder prediction 605 627 - -
Tan09g0563 627 FunFam Wall-associated receptor kinase 2 396 614 - -
Tan09g0563 627 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524(InterPro)
Tan09g0563 627 SMART serkin_6 320 601 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0563 627 SUPERFAMILY Protein kinase-like (PK-like) 304 591 IPR011009 -
Tan09g0563 627 Gene3D Phosphorylase Kinase; domain 1 294 395 - -
Tan09g0563 627 CDD LysM 172 216 IPR018392 -
Tan09g0563 627 Pfam Protein kinase domain 320 587 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0563 627 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 84 597 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(InterPro)|GO:0007166(PANTHER)
Tan09g0563 627 FunFam Wall-associated receptor kinase 2 293 395 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1318 Tan-Chr6:15821162 Tan09g0563 Tan-Chr9:50091053 9.50E-235 dispersed
Tan06g1320 Tan-Chr6:15882723 Tan09g0563 Tan-Chr9:50091053 4.10E-235 dispersed
Tan09g0563 Tan-Chr9:50091053 Tan09g0569 Tan-Chr9:50384667 4.70E-239 dispersed
Tan09g0560 Tan-Chr9:49622816 Tan09g0563 Tan-Chr9:50091053 4.20E-240 proximal
Tan09g0563 Tan-Chr9:50091053 Tan09g0564 Tan-Chr9:50116318 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68025 PF00069 Pkinase 3.00E-50 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0563 - - - 0.0