Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0568 ATGGCAGCTTCTTCCCCGTGTAATGCTCTTTCTCTCATCCTCTTCCTTTCTCTCTTCCCTTATCAATCCCTTAGCCAACAGTCATACGTCGGAAACGAAATGGGTTGCTCTATCGATAACATAACTTCAATGTCAAAAGGATATGTGTGCACTGATTCTATTTACTTATGTGATTCCTCCTATTTGACCTTCAGATCCAAGCCGCCCTATGACACAGAATCCAAAATAAGCGATCTCTTCAATCTCTATATCTACAATACAACATTTGCGAATGGTAGTTTGTTTGGTATTAGGGTTTCGTGCTCATGTGTGCATCGTTCCTATCGGTATGTCACCTATTACACCACTAAGAGAGGTGATAGTTTTGAAAAGATAGCCTATGATATTTTCCAAGGCCTGGTTGGCTGCTCGGCACTAAAAAGTCAAAACCAACAAGATTATGGGTTCGATAATAGTTCTACGATGGGCATAAAACTTCAAGTTCCGTTGCGATGTGCTTGTCCTACAAAAGCTCAAAAAGATAGTGGAGTTGAGACCTTGGTTGTGTATATGCTACAACCTAATGAGACGATTGGATCCGTTGCGAAGGATTTTGGAGTCGAGGAAGAGAGCGTCTTTGAAGCAAACAGGCTTTCCAATTCAAGCTATATCTACCCGTTTACGCCTGTTTTGGTTCCGTTGGACAAAAATGGGACTTGCAGAGTATTCAACTCCAGTTGTCCTTACTTGCCTTCGACTTCTGGTTCGAATTATACCGCGATTTTCATAATCTTACTTACAATTGGACATCAACTACTATTGAAGAAAAGAAGACGCGAACTTAATAAGAAAATGTTTTTCCAGCAAAATGGTGGCCTGATACTGCAACAAAAACTACTTGAAGATAGCAAGAGAGTAAAAATATTTTCACAAGAAGAACTTGAAGAAGCAACGGATAACTACAGTAAAGGTAGATTTCTTGGTCAGGGAGGTTATGGCACAGTTTACAAAGGAATGTTCCATGACAACACCATTGTTGCAATCAAGAAGTCAAAGAAAGTTGAGAAAAATTGGATCGAACAATTTATTAACGAAGTTATTATCCTCTCTCAAATTAACCACAGAAATATTGTCAAGCTTCTTGGTTGTTGTTTAGAAACTGAGTTTCCTTTGCTAGTTTATGAATTTGTTTCCAATGGAACGCTTTCACAACATATTCACAAAGAAGATTCAGGAGAATCTCCTTCTCTTTCATGGAAAAACCGTCTCAGAATCGCCACTGAAGTTGCTGGAGCCATATCTTACATGCACTCTGCAGCTTCAATTCCTATTTATCACAGAGATATCAAGTCTTTAAACATACTTTTGGATGATAATTATAGTGCAAAAGTTTCAGATTTTGGAACATCAAGATTTGTGTCGTGTGATCAATCACATTTGACTACAAAAGTGTTAGGAACTTTTGGATATATAGATCCTGAGTACTTCAGATCAAGTCAATACACTGAAAAGAGTGACGTATATAGCTTTGGAGTTTTAATGGTAGAGCTTTTAACTGGGAAGGTACCTGTTACTTTTGCAAAGAAGAATGACGGTGGAAATCTATTAGACTATTTCATTTCATTAAAAAGGAATAATCGACTTGTTGAAATTTTAGATATTGAAGTAGCCACCGAAGAAATGATGGGCATTGTTAACAACCTTGCAGAACTTAGTACAAAATGTTTAAGATCAAATGGGAGGGAGAGACCAACAATGAAACAAGTATATTTGGAACTGGAAGGATTGGAAAAGTCTCAAGGTTGCCAAGAAATTTGGGAAGACGTTCAATCAATTGGAACTTCTTCATCAATCTCTCTAGAGGTTGGGGATAAAAGCAACCCATCATATCTTGTGTGA 1878 37.86 MAASSPCNALSLILFLSLFPYQSLSQQSYVGNEMGCSIDNITSMSKGYVCTDSIYLCDSSYLTFRSKPPYDTESKISDLFNLYIYNTTFANGSLFGIRVSCSCVHRSYRYVTYYTTKRGDSFEKIAYDIFQGLVGCSALKSQNQQDYGFDNSSTMGIKLQVPLRCACPTKAQKDSGVETLVVYMLQPNETIGSVAKDFGVEEESVFEANRLSNSSYIYPFTPVLVPLDKNGTCRVFNSSCPYLPSTSGSNYTAIFIILLTIGHQLLLKKRRRELNKKMFFQQNGGLILQQKLLEDSKRVKIFSQEELEEATDNYSKGRFLGQGGYGTVYKGMFHDNTIVAIKKSKKVEKNWIEQFINEVIILSQINHRNIVKLLGCCLETEFPLLVYEFVSNGTLSQHIHKEDSGESPSLSWKNRLRIATEVAGAISYMHSAASIPIYHRDIKSLNILLDDNYSAKVSDFGTSRFVSCDQSHLTTKVLGTFGYIDPEYFRSSQYTEKSDVYSFGVLMVELLTGKVPVTFAKKNDGGNLLDYFISLKRNNRLVEILDIEVATEEMMGIVNNLAELSTKCLRSNGRERPTMKQVYLELEGLEKSQGCQEIWEDVQSIGTSSSISLEVGDKSNPSYLV 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 50340537 50343305 + Tan0009435.1 Tan09g0568 762911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0568 625 FunFam Wall-associated receptor kinase 2 287 389 - -
Tan09g0568 625 CDD LysM 181 219 IPR018392 -
Tan09g0568 625 Gene3D Transferase(Phosphotransferase) domain 1 390 608 - -
Tan09g0568 625 Pfam LysM domain 183 226 IPR018392 -
Tan09g0568 625 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 117 593 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(InterPro)|GO:0007166(PANTHER)
Tan09g0568 625 Pfam Protein kinase domain 314 582 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0568 625 SMART LysM_2 113 162 IPR018392 -
Tan09g0568 625 SMART LysM_2 182 226 IPR018392 -
Tan09g0568 625 ProSiteProfiles Protein kinase domain profile. 314 589 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0568 625 CDD STKc_IRAK 320 589 - -
Tan09g0568 625 Gene3D LysM domain 168 233 IPR036779 -
Tan09g0568 625 Gene3D Phosphorylase Kinase; domain 1 294 389 - -
Tan09g0568 625 FunFam Wall-associated receptor kinase 2 390 607 - -
Tan09g0568 625 SUPERFAMILY Protein kinase-like (PK-like) 297 586 IPR011009 -
Tan09g0568 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0568 625 SMART serkin_6 314 589 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0568 625 Coils Coil 293 313 - -
Tan09g0568 625 ProSitePatterns Protein kinases ATP-binding region signature. 320 343 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0568 Tan-Chr9:50340537 Tan09g0570 Tan-Chr9:50481496 1.40E-174 dispersed
Tan09g0568 Tan-Chr9:50340537 Tan09g0569 Tan-Chr9:50384667 2.10E-239 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68027 PF00069 Pkinase 3.10E-52 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0568 - - - 0.0