Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0569 ATGGAAACATCTTCTCCATATAATCCTCTTTGTTTCATCCTCTTCCTTTCTTTCTTTCTTTATCAATCTCTCTGCCAACAACCATATGTGGGAAAGGAGATCGGTTGCTCTATCAATAACAATTCGATGTCAAAAGAGTACGCTTGTAGTGATTCTATTTACAATTGTTATTACTCCTATTTGACCTTCAAATCCAAACCGCCCTACGACACAGAATCAAACATAAACGGTCTCTTCGACTATAGTGTCTACAACACAACATTAAAGAATGGTAGTTTGTTTATTACTCCTGTTTTGTGTTCGTGTGTGCGTCGTTCCTATCGGTATGTCACCCACTACACTGTTAAGATTGGTGATAGCTATGAAAAGATAGCGAATGATATTTATCAAGGCCTAGTGAGTTGCTCGGCACTAAGAAGTCAAAACCAACAAGATTATGTTGTGGAGAAAAATTCTTCAATGGACATGATACTCGAAGTTCCTTTGCGATGCGCATGTCCTACCGAAGCTCAGAAACGGGGTGGAGTTGAGGCCTTGGTTGTGTATATGCTACAACCAAATGAAACCATTGGATCTGTTGCGAGGGAATTTGGGGTTGATGAAGAAAGAATTTTAGAAGCAAATATGCTTTCAAATTCAACCCATATCTACCCATTTACGCCTCTTTTGGTTCCATTGGCCGAAAATCAGACTTGCAAAGCATACCCTTATTCTTCCCAACAGTGCAGGGGCCATCCTTCCACCAACCATTTTGATCCATATATTTTCCTATGGGTCGGGGTTGCAATAGGTGGTCTAACAACATTACTATGTTGCTTCTTTTGCGGATGCAAAGGAAATCAACTATGGTTGAAGAAAAGGAGACGCAAACTTGATAAGAAAAAGTTTTTCAAGCAAAATGGTGGCCTCTTATTGCAACAAAAACTACTCGAAGATAGCGAGAGAGTAAAAATATTTACACAGGAAGAACTAGAAGAAGCAACGGATAACTACAACGAAAGTAGAGTTCTTGGTCAAGGAGGGTATGGCACAGTTTACAAAGGAGTGCTCTATGACAACACAGTTGTTGCAATCAAAAGGTCAAAACAAATTGAGACAAACTGGATCGAACAATTTATTAATGAAGTTATTATCCTCTCCCAAATTAACCACAAAAATATTGTAAGACTTTTGGGATGTTGTTTAGAAGCTGAGTTTCCTTTGCTAGTTTATGAATTTGTTTCGAATGGGACACTTTCGCACCATATTCACAAGGAGGATCTTGAAGAATCACATTCTCTTTCATGGGAGACTCGTCTTAGAATTGTTTCTGAAGTTGCAGGAGCCATATCTTACATGCATTCTTCGGCTTCAATTCCTATTTATCACAGAGATATAAAGTCTTTAAACATACTTTTGGATGATAACTCTAGTGCAAAAGTTTCAGATTTTGGAACATCCAGATTTGTGTCATGTGATCAATCACATTTGACAACAAAAGTGTTGGGAACTTTTGGATATATAGATCCTGAGTACTTCATATCAAGTCAATACACTGAAAAGAGTGACGTGTATAGCTTTGGAGTCTTGATGGTAGAGCTTTTAACTGGAAAGCTCCCCGTAAGTTATACAAGAAATGACGGCAGGAATCTGTTAGACTACTTCATTTCATTGGAAAAGGCTAATCAACTTGTTGAAATTTTAGACATAGCAATAGCAATGGAAGAAAATATGGAAGAAGTTAAAAATGTTGCGACACTTGCCACCAAATGTTTAAAATCCAATGGAAAAGAGAGACCAACAATGAAACAAATATATTTGGAACTAGAAAGATTGAGAAAATCTAAAGATTGTTCAGAAATTAGTGAAGTTCAATCAACTGGAGGGTCTTCATCGTCCTCTCTAGACGTTGGAGATGATGAGCTCACAGATGACAACACCATCATATCATTTGAAACAAGGACACCATGA 1950 37.74 METSSPYNPLCFILFLSFFLYQSLCQQPYVGKEIGCSINNNSMSKEYACSDSIYNCYYSYLTFKSKPPYDTESNINGLFDYSVYNTTLKNGSLFITPVLCSCVRRSYRYVTHYTVKIGDSYEKIANDIYQGLVSCSALRSQNQQDYVVEKNSSMDMILEVPLRCACPTEAQKRGGVEALVVYMLQPNETIGSVAREFGVDEERILEANMLSNSTHIYPFTPLLVPLAENQTCKAYPYSSQQCRGHPSTNHFDPYIFLWVGVAIGGLTTLLCCFFCGCKGNQLWLKKRRRKLDKKKFFKQNGGLLLQQKLLEDSERVKIFTQEELEEATDNYNESRVLGQGGYGTVYKGVLYDNTVVAIKRSKQIETNWIEQFINEVIILSQINHKNIVRLLGCCLEAEFPLLVYEFVSNGTLSHHIHKEDLEESHSLSWETRLRIVSEVAGAISYMHSSASIPIYHRDIKSLNILLDDNSSAKVSDFGTSRFVSCDQSHLTTKVLGTFGYIDPEYFISSQYTEKSDVYSFGVLMVELLTGKLPVSYTRNDGRNLLDYFISLEKANQLVEILDIAIAMEENMEEVKNVATLATKCLKSNGKERPTMKQIYLELERLRKSKDCSEISEVQSTGGSSSSSLDVGDDELTDDNTIISFETRTP 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 50384667 50387083 + Tan0000730.1 Tan09g0569 762912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0569 649 SUPERFAMILY Protein kinase-like (PK-like) 315 602 IPR011009 -
Tan09g0569 649 CDD LysM 180 224 IPR018392 -
Tan09g0569 649 FunFam Wall-associated receptor kinase 2 304 406 - -
Tan09g0569 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0569 649 CDD STKc_IRAK 337 605 - -
Tan09g0569 649 SMART serkin_6 331 605 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0569 649 Coils Coil 310 330 - -
Tan09g0569 649 Pfam Protein kinase domain 331 598 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0569 649 Gene3D Transferase(Phosphotransferase) domain 1 407 625 - -
Tan09g0569 649 MobiDBLite consensus disorder prediction 614 630 - -
Tan09g0569 649 Gene3D LysM domain 170 234 IPR036779 -
Tan09g0569 649 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 126 609 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(InterPro)|GO:0007166(PANTHER)
Tan09g0569 649 ProSiteProfiles LysM domain profile. 180 224 IPR018392 -
Tan09g0569 649 MobiDBLite consensus disorder prediction 611 649 - -
Tan09g0569 649 FunFam Wall-associated receptor kinase 2 407 624 - -
Tan09g0569 649 ProSiteProfiles Protein kinase domain profile. 331 605 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0569 649 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524(InterPro)
Tan09g0569 649 Pfam LysM domain 182 225 IPR018392 -
Tan09g0569 649 Pfam LysM domain 113 142 IPR018392 -
Tan09g0569 649 Gene3D Phosphorylase Kinase; domain 1 305 406 - -
Tan09g0569 649 SMART LysM_2 112 161 IPR018392 -
Tan09g0569 649 SMART LysM_2 181 225 IPR018392 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0563 Tan-Chr9:50091053 Tan09g0569 Tan-Chr9:50384667 4.70E-239 dispersed
Tan09g0564 Tan-Chr9:50116318 Tan09g0569 Tan-Chr9:50384667 3.90E-241 dispersed
Tan09g0569 Tan-Chr9:50384667 Tan11g1218 Tan-Chr11:10164484 3.00E-95 dispersed
Tan09g0568 Tan-Chr9:50340537 Tan09g0569 Tan-Chr9:50384667 2.10E-239 tandem
Tan09g0569 Tan-Chr9:50384667 Tan09g0570 Tan-Chr9:50481496 5.20E-148 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68028 PF00069 Pkinase 1.70E-52 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0569 - - - 0.0