Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0570 ATGGGTTTATCTGGTTCGAGCAACTTTGAACTTTTAATCACCTTGATTATAGTTGGTGGTCTCATCGTATTATTTAGTTGTTTCTTTTGTGGATGCAAAGGACATCAACTACTATTGAAGAAAAGAAGACGCAAACTTAATAAGAAAATGTTTTTCCAGCAAAATGGTGGCCTATTACTGCAACAAAAACTACTTGAAAACAACAAGAGAGTAAAAATATTTTCACAAGAAGAACTTGAAGAAGCAACGGATCACTATAGTCAAAGTAGATTTCTTGGTCAGGGAGGTTATGGCACAGTTTACAAAGGGATGCTTCATGACAACACCATTGTTGCAATCAAGAAGTCAAAGAAAATTGAGAAAAATTGGGTCGAACAATTCATTAACGAAGTTATTATTCTCTCTCAAATTAACCACAGAAATATTGTCAAGCTTCTTGGTTGTTGTTTAGAAACTGAATTTCCTTTGCTAGTCTATGAATTTGTTTCTAATGGAACGCTTTCACAGCATATTCACAAGGAAGATCCAGGAGAATCTCCTTCTCTTTCATGGAAAAATCGTCTCAAAATCGCTACTGAAGTTGCTGGAGCTATATCTTACATGCACTCTGCAACTTCAATTCCGATTTATCACAGAGATATCAAGTCTTTAAACGTACTTTTGGATGATAACTATAGTGCAAAAGTTTCAGATTTTGGAACATCAAGATTTGTGTCGTGTGATCAATCACATTTGACTACAAAAGTATTAGGAACTTTTGGATATATAGATCCTGAGTACTTCAGATCAAGTCAATACACTGAAAAGAGTGACGTATATAGCTTTGGAGTCTTAATGGTAGAGCTCTTAACTGGGAAGATACCGGTCACTTTTGCAAAGAATAATGACGGTGGGAGTCTATTAGACTATTTCATTTCATTAGAAAAGAATAATCAACTTGTTGAAATTTTAGATATTGAAGTAGCCACAGAAGAAATGATGGGTGTTGTTAACAACATTGCGACACTTACTACAAAATGTTTAAGATCAAATGGGAGAGAGAGACCAACAATGAAACAAGTATATTTGGAACTAGAAGGATTGGGAAAGTCTCAAGGTTGTTCAGAAATTTGTGAAGAAGTTCAATCAATTGGAACTTCTTCATCAATATCTCTAGAGGGTTGGGATAAAAACAACCCATCATATCTTGTGTGA 1194 34.76 MGLSGSSNFELLITLIIVGGLIVLFSCFFCGCKGHQLLLKKRRRKLNKKMFFQQNGGLLLQQKLLENNKRVKIFSQEELEEATDHYSQSRFLGQGGYGTVYKGMLHDNTIVAIKKSKKIEKNWVEQFINEVIILSQINHRNIVKLLGCCLETEFPLLVYEFVSNGTLSQHIHKEDPGESPSLSWKNRLKIATEVAGAISYMHSATSIPIYHRDIKSLNVLLDDNYSAKVSDFGTSRFVSCDQSHLTTKVLGTFGYIDPEYFRSSQYTEKSDVYSFGVLMVELLTGKIPVTFAKNNDGGSLLDYFISLEKNNQLVEILDIEVATEEMMGVVNNIATLTTKCLRSNGRERPTMKQVYLELEGLGKSQGCSEICEEVQSIGTSSSISLEGWDKNNPSYLV 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 50481496 50483714 + Tan0022214.1 Tan09g0570 762913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0570 397 FunFam Wall-associated receptor kinase 2 59 161 - -
Tan09g0570 397 FunFam Wall-associated receptor kinase 2 162 379 - -
Tan09g0570 397 SMART serkin_6 86 361 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0570 397 Gene3D Transferase(Phosphotransferase) domain 1 162 379 - -
Tan09g0570 397 Gene3D Phosphorylase Kinase; domain 1 60 161 - -
Tan09g0570 397 ProSiteProfiles Protein kinase domain profile. 86 361 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g0570 397 SUPERFAMILY Protein kinase-like (PK-like) 69 358 IPR011009 -
Tan09g0570 397 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 35 362 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(InterPro)|GO:0007166(PANTHER)
Tan09g0570 397 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524(InterPro)
Tan09g0570 397 CDD STKc_IRAK 92 361 - -
Tan09g0570 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g0570 397 Pfam Protein kinase domain 86 354 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0568 Tan-Chr9:50340537 Tan09g0570 Tan-Chr9:50481496 1.40E-174 dispersed
Tan09g0570 Tan-Chr9:50481496 Tan11g1218 Tan-Chr11:10164484 1.20E-91 dispersed
Tan09g0569 Tan-Chr9:50384667 Tan09g0570 Tan-Chr9:50481496 5.20E-148 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68029 PF00069 Pkinase 2.50E-52 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0570 - - - 0.0