Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0618 ATGTTCTTGAATGGATCCAGTGAAATCGCCTCACTTCATACTCAACAGGGCAAGAAAGGGATGAACCAAGATGCCATGATTGTATGGGAGAATTTTGGCTCCAGAACAGATACATTCTTCTGTGGAGTTTTTGATGGCCATGGTCCTTATGGTCATCTGGTCGCAAAAAGAGTGAGGGATTCTCTTCCCCTGAAACTGACTGCACATTGGGAGGCTAATGCAAGCAGTGAGGATATTTCAAAAGAGTTCGGTTGTAAAACAAAAGATGTGAACAATGAGGATTCTGCCTTAGAAACTGGTTGGAAGGAAGCTAGTTTCCCCCTTATGCACCCTGCAATTTCTGAAAAACTGAAGGAATCATTTCTGAAGGCTTTTAAGATAATGGATGTGGAACTTCAAATGCAACCAAGTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAGCTCTTGTTAAGCAGGGTCGAGATCTTGTTATTGGAAACGTCGGGGACTCACGAGCTGTGCTGGGTACCAGAGATGAGGATAATTATCTCCAAGCAGTTCAGTTGACCATAGATCTCAAGCCAGATATTCCAGCTGAGAGAATTCTCAAATGCAAAGGTAGGGTATTTGCTCATCAGGATGAACCAGAAGTTGCTAGAGTATGGCTTCCAAACAATGATTCCCCCGGGCTGGCGATGGCTCGATCTTTCGGAGACTTTTGCCTCAAGGATTTCGGTCTAATTTCTGTTCCTGAAATATCATATCGGTTTCTGACAGACAAGGATGAGTTTATAGTTTTAGCTACCGACGGAATTTGGGATGTTCTCTCAAACCAGGAGGTAGTCGACATTGTGGCATCAGCCCCTGCTCGTTCTGCAGCTCGATCATTGGTCGAGTCTGCAACTAAAACATGGAGATGCAAGTTTCCTTCTTCCAACATTGACGACTGTGCTGTTGTGTGCCTCTTCCTTGACTCGAACTTGATGGTGTCGGAGTCGAATACTAAATCCAAGGAGGAGGTTAATTCAGCTATCCAAGCTGAGACAGCCATGGTAGATGATGATGTCTCAGGAGTAGCTGGTCTACGACATTCGGAAGTTGACGTTGCGCGAACAGTCGGAGTTTCTCCGAGAAGCAGACGATAG 1128 45.04 MFLNGSSEIASLHTQQGKKGMNQDAMIVWENFGSRTDTFFCGVFDGHGPYGHLVAKRVRDSLPLKLTAHWEANASSEDISKEFGCKTKDVNNEDSALETGWKEASFPLMHPAISEKLKESFLKAFKIMDVELQMQPSIDCFCSGTTAVALVKQGRDLVIGNVGDSRAVLGTRDEDNYLQAVQLTIDLKPDIPAERILKCKGRVFAHQDEPEVARVWLPNNDSPGLAMARSFGDFCLKDFGLISVPEISYRFLTDKDEFIVLATDGIWDVLSNQEVVDIVASAPARSAARSLVESATKTWRCKFPSSNIDDCAVVCLFLDSNLMVSESNTKSKEEVNSAIQAETAMVDDDVSGVAGLRHSEVDVARTVGVSPRSRR 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 52704968 52707257 + Tan0009714.1 Tan09g0618 762961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0618 375 Pfam Protein phosphatase 2C 105 284 IPR001932 -
Tan09g0618 375 ProSiteProfiles PPM-type phosphatase domain profile. 9 318 IPR001932 -
Tan09g0618 375 SUPERFAMILY PP2C-like 10 319 IPR036457 -
Tan09g0618 375 Gene3D - 6 321 IPR036457 -
Tan09g0618 375 CDD PP2Cc 9 318 IPR001932 -
Tan09g0618 375 SMART PP2C_4 1 316 IPR001932 -
Tan09g0618 375 PANTHER PROTEIN PHOSPHATASE 11 317 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0618 Tan-Chr9:52704968 Tan09g0622 Tan-Chr9:52973373 5.00E-212 dispersed
Tan09g0618 Tan-Chr9:52704968 Tan09g0621 Tan-Chr9:52973373 5.00E-212 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0618 - - - 0.0