Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0622 ATGGGGTCTTGCTTGTCTGTTGGAAGTAAGAGGGCCATTCCTGGTTCCCCTGTATCTCCTGTGTTGGGAGCAAGGAAACAGAAAGACTCAGACAATGGGGTGAAGTTTAAGAATTCTGTGTTTGAGCAGCAGAGTGAAGCAACAGTACACAGAATTCCTGGTAGGATGTTCTTGAATGGATCCAGTGAAATCGCCTCACTTCATACTCAACAGGGCAAGAAAGGGATGAACCAAGATGCCATGATTGTATGGGAGAATTTTGGCTCCAGAACAGATACATTCTTCTGTGGAGTTTTTGATGGCCATGGTCCTTATGGTCATCTGGTCGCAAAAAGAGTGAGGGATTCTCTTCCCCTGAAACTGACTGCACATTGGGAGGCTAATGCAAGCAGTGAGGATATTTCAAAAGAGTTCGGTTGTAAAACAAAAGATGTGAACAATGAGGATTCTGCCTTAGAAACTGGTTGGAAGGAAGCTAGTTCCCCCTTTATGCACCTTGCAATTTCTGAAAAACTGAAGGAATCGTTTCTGAAGGCTTTTAAGATAATGGATGTGGAACTTCAAATGCAACCAAGTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAGCTCTTGTTAAGCAGGGTCGAGATCTTGTTATTGGAAACGTCGGGGACTCACGAGCTGTGCTGGGTACCAGAGATGAGGATAATTATCTCCAAGCAGTTCAGTTGACCATAGATCTCAAGCCAGATATTCCAGGGGAAGCTGAGAGAATTCTCAAATGCAAAGGTAGGGTATTTGCTCATCAGGATGAACCAGAAGTTGCTAGAGTATGGCTTCCAAACAATGATTCCCCCGGGCTGGCGATGGCTCGATCTTTCGGAGACTTTTGCCTCAAGGATTTCGGTCTAATTTCTGTTCCTGAAATATCATATCGGTTTCTGACAGACAAGGATGAGTTTATAGTTTTAGCTACAGACGGAATTTGGGATGTTCTCTCAAACCAGGAGGTAGTCGACATTGTGGCATCAGCCCCTGCTCGTTCTGCAGCTCGATCATTGGTCGAGTCTGCAACTAAAACATGGAGATGCAAGTTTCCTTCTTCCAACATTGACGACTGTGCTGTTGTGTGCCTCTTCCTCGACTCGAACTTGATGGTGTCGGAGTCGAATATTAAATCCAAGGAGGAGGTTAATTCAGCTATCCAAGCTGAGACAGCCATGGGAGATGATGATGTCTCAGGAGTAGCTGGTCTACGACATTCGGAAGTTGACGTTGCGCGAACAGTCGGAGTTTCTCCGAGAAGCAGACGATAG 1299 45.42 MGSCLSVGSKRAIPGSPVSPVLGARKQKDSDNGVKFKNSVFEQQSEATVHRIPGRMFLNGSSEIASLHTQQGKKGMNQDAMIVWENFGSRTDTFFCGVFDGHGPYGHLVAKRVRDSLPLKLTAHWEANASSEDISKEFGCKTKDVNNEDSALETGWKEASSPFMHLAISEKLKESFLKAFKIMDVELQMQPSIDCFCSGTTAVALVKQGRDLVIGNVGDSRAVLGTRDEDNYLQAVQLTIDLKPDIPGEAERILKCKGRVFAHQDEPEVARVWLPNNDSPGLAMARSFGDFCLKDFGLISVPEISYRFLTDKDEFIVLATDGIWDVLSNQEVVDIVASAPARSAARSLVESATKTWRCKFPSSNIDDCAVVCLFLDSNLMVSESNIKSKEEVNSAIQAETAMGDDDVSGVAGLRHSEVDVARTVGVSPRSRR 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 52973373 52976969 - Tan0018939.2 Tan09g0622 762965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0622 432 ProSiteProfiles PPM-type phosphatase domain profile. 64 375 IPR001932 -
Tan09g0622 432 Gene3D - 60 377 IPR036457 -
Tan09g0622 432 CDD PP2Cc 64 375 IPR001932 -
Tan09g0622 432 Pfam Protein phosphatase 2C 166 347 IPR001932 -
Tan09g0622 432 PANTHER PROTEIN PHOSPHATASE 51 374 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan09g0622 432 MobiDBLite consensus disorder prediction 1 29 - -
Tan09g0622 432 SMART PP2C_4 54 373 IPR001932 -
Tan09g0622 432 SUPERFAMILY PP2C-like 63 376 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0618 Tan-Chr9:52704968 Tan09g0622 Tan-Chr9:52973373 5.00E-212 dispersed
Tan09g0622 Tan-Chr9:52973373 Tan09g1239 Tan-Chr9:64759072 1.10E-24 dispersed
Tan09g0621 Tan-Chr9:52973373 Tan09g0622 Tan-Chr9:52973373 3.70E-251 tandem
Tan09g0622 Tan-Chr9:52973373 Tan09g0623 Tan-Chr9:52973373 1.20E-188 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0622 - - - 0.0