Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0623 ATGGGGTCTTGCTTGTCTGTTGGAAGTAAGAGGGCCATTCCTGGTTCCCCTGTATCTCCTGTGTTGGGAGCAAGGAAACAGAAAGACTCAGACAATGGGGTGAAGTTTAAGAATTCTGTGTTTGAGCAGCAGAGTGAAGCAACAGTACACAGAATTCCTGGTAGGATGTTCTTGAATGGATCCAGTGAAATCGCCTCACTTCATACTCAACAGGGCAAGAAAGGGATGAACCAAGATGCCATGATTGTATGGGAGAATTTTGGCTCCAGAACAGATACATTCTTCTGTGGAGTTTTTGATGGCCATGGTCCTTATGGTCATCTGGTCGCAAAAAGAGTGAGGGATTCTCTTCCCCTGAAACTGACTGCACATTGGGAGGCTAATGCAAGCAGTGAGGATATTTCAAAAGAGTTCGGTTGTAAAACAAAAGATGTGAACAATGAGGATTCTGCCTTAGAAACTGGTTGGAAGGAAGCTAGTTCCCCCTTTATGCACCTTGCAATTTCTGAAAAACTGAAGGAATCGTTTCTGAAGGCTTTTAAGATAATGGATGTGGAACTTCAAATGCAACCAAGTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAGCTCTTGTTAAGCAGGGTCGAGATCTTGTTATTGGAAACGTCGGGGACTCACGAGCTGTGCTGGGTACCAGAGATGAGGATAATTATCTCCAAGCAGTTCAGTTGACCATAGATCTCAAGCCAGATATTCCAGGGGAAGCTGAGAGAATTCTCAAATGCAAAGGTAGGGTATTTGCTCATCAGGATGAACCAGAAGTTGCTAGAGTATGGCTTCCAAACAATGATTCCCCCGGGCTGGCGATGGCTCGATCTTTCGGAGACTTTTGCCTCAAGGATTTCGGTCTAATTTCTGTTCCTGAAATATCATATCGGTTTCTGACAGACAAGGATGAGTTTATAGTTTTAGCTACAGACGGAGTATGA 972 44.14 MGSCLSVGSKRAIPGSPVSPVLGARKQKDSDNGVKFKNSVFEQQSEATVHRIPGRMFLNGSSEIASLHTQQGKKGMNQDAMIVWENFGSRTDTFFCGVFDGHGPYGHLVAKRVRDSLPLKLTAHWEANASSEDISKEFGCKTKDVNNEDSALETGWKEASSPFMHLAISEKLKESFLKAFKIMDVELQMQPSIDCFCSGTTAVALVKQGRDLVIGNVGDSRAVLGTRDEDNYLQAVQLTIDLKPDIPGEAERILKCKGRVFAHQDEPEVARVWLPNNDSPGLAMARSFGDFCLKDFGLISVPEISYRFLTDKDEFIVLATDGV 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 52973373 52976969 - Tan0018939.3 Tan09g0623 762966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0623 323 SMART PP2C_4 54 323 IPR001932 -
Tan09g0623 323 ProSiteProfiles PPM-type phosphatase domain profile. 64 323 IPR001932 -
Tan09g0623 323 CDD PP2Cc 64 323 IPR001932 -
Tan09g0623 323 MobiDBLite consensus disorder prediction 1 29 - -
Tan09g0623 323 SUPERFAMILY PP2C-like 62 323 IPR036457 -
Tan09g0623 323 PANTHER PROTEIN PHOSPHATASE 51 323 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan09g0623 323 Pfam Protein phosphatase 2C 165 323 IPR001932 -
Tan09g0623 323 Gene3D - 60 323 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0621 Tan-Chr9:52973373 Tan09g0623 Tan-Chr9:52973373 1.20E-188 dispersed
Tan09g0623 Tan-Chr9:52973373 Tan01g0124 Tan-Chr1:1219063 4.30E-10 dispersed
Tan09g0622 Tan-Chr9:52973373 Tan09g0623 Tan-Chr9:52973373 1.20E-188 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0623 - - - 0.0