Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0704 ATGGCCACTCAGGCTCTTGTTTCATCTTCTTTAACCTCTTCAGTTGGCGCAGCCAGACAAAGATTAGGGACAAAACCCTCTGTTGGATCCTCCAGAAAATCTGCTTCTTTTGTTGTTAGAGCTGAAGGCGGAGCTCCTGTTAAGCAAGGAGCAGACAGACAACTATGGTTTGCCTCAAAACAAAGTCTGTCTTACCTTGATGGAAGTCTCCCGGGCGATTACGGATTCGACCCATTGGGGCTATCGGACCCCGAGGGTACAGGAGGGTTCATCGAGCCGAAATGGTTGGCATACGGCGAGGTGATCAACGGGAGGTTCGCGATGCTGGGAGCAGCAGGAGCCATTGCCCCAGAGATCTTTGGATCACTAGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACTGGGGTCATCCCACCAGCAGGGACCTACAACTACTGGGCAGACCCCTACACACTGTTTGTGTTTGAGATGGCTCTAATGGGCTTTGCTGAACACAGAAGATTTCAAGATTGGGCCAACCCAGGGTCCATGGGAAAGCAATACTTTTTGGGCCTAGAGAAATTCTTGGGTGGGTCAGGGGACCCAGCTTACCCAGGTGGACCCTTGTTCAACCCTCTAGGATTTGGAAAAGATGAGAAGTCAATGAAGGAATTGAAGCTCAAGGAAGTGAAGAATGGGAGACTTGCAATGTTGGCAATTTTGGGTTACTTTGTACAAGGTCTTGTGACTGGTGTTGGGCCTTACCAAAACCTTTTGGATCATTTATCTGACCCTGTCAACAACAATGTTTTGACAAGCCTTAAATTCCACTAG 822 48.91 MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 56612610 56614176 + Tan0017620.1 Tan09g0704 763047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0704 273 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 5 268 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Tan09g0704 273 FunFam Chlorophyll a-b binding protein, chloroplastic 54 272 - -
Tan09g0704 273 Pfam Chlorophyll A-B binding protein 64 243 IPR022796 -
Tan09g0704 273 Gene3D Chlorophyll a/b binding protein domain 54 272 - -
Tan09g0704 273 SUPERFAMILY Chlorophyll a-b binding protein 52 269 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0704 Tan-Chr9:56612610 Tan09g1055 Tan-Chr9:62798005 1.40E-41 dispersed
Tan09g0704 Tan-Chr9:56612610 Tan09g2110 Tan-Chr9:71467726 5.20E-41 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0704 K08909 - csv:101202993 531.561