Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0798 ATGTTTCAAGACGAAGGCACATCCTCCATAACTTCCTCCCCTCTCCAGTTCTTCACAATGATGTCTCTTTCACCTAAATTGGGTTCTCCATATCCATGGCTTAGAGAGCTCAAATCTGAGGAGAGGGGCTTGTATCTGATCCATTTGTTGCTTACCTGTGCAAATCATGTGGCTGTTGGCAGCCTTGACAGTGCTAATCTTGCTCTTGATCAAATATCCCATCTTGCTTCTGCTGATGGTGATACAATGCAGCGGATTGCAGCGTATTTTGCCGAGGCTCTGGCCGATCGAATCCTCAAAAGTTGGCCTGGTCTTTACAAGGCCTTCAACTCCACAAAGATACCAATGGTTTCAGAGGAGATTCTTGTTAAGAAACTGTTTTTTGAAATGTTTCCATTCCTCAAGTTGGCTTTTGTGCTTACTAATCAGGCTATTGTTGAAGCCATGGAGGGGGAAAAGATGATTCATATCATTGATCTCAATGCCAAGGAAACTGCTCAGTGGCTAGCACTTTTGCAAGTTTTGAGTGTCAGGCCTGAAGGACCTCCCCATTTGAGAATCACTGGGGTTCATCCACAGAAAGAGGTTCTGGATCAAATGGCTAGAAGGCTGACCGAAGAAGCCGAAAAATTGGATATCCCGTTTCAATTCAATTCGGTTATCAGTCAATTGGAGGATCTTGATATGGAAAAGCTTCGTGTGAAAACTGGGGAGGCCCTGGCTATCAACTCAGTTCTTCAGTTGCACACCCTTTTGGGCTCTGATAATGAAGTCCTGCAAAAGCCATCTCCATCAGCAGCACAGAGTGCAAATGGAGTTCAATACTCAAGGTACCCACACCTGAACCAAACCACCTTGAGCGAGTTACTCGACAAGGATTTGGTTAATGGGTGCAGTCCAAGCCCGGATTCGGTCTCCTCATCAGCACTGTCTCAAGCCAATGCAACGAAGATCGAGAGCTTTTTGAATGGATTGTGGAGTTTGACGCCAAAGGTGATGGTCGTAACAGAACAAGATTCTAACCATAATGGTTTGACGCTTATGGACAGATTACTGGAGGCTCTCCACACATATGCAGCTATTTTTGACTGTTTGGAATCTAACATGTCAAGAACATCCCTGGAGAGGTTGAAGTTGGAAAAGATGCTATTTGGGGAAGAGATCAAGAACATTATAGCTTGTGAGGGAGCTGAAAGGAAGGAACGACACGAAAAGCGTGAGAAATGGAGTCAACGATTCGATCTCGCAGGGTTCAGGCATGTGTCTTTGAGTTATTATGGCATGCTGCAGGCGCGGAGCCTGCTGCAGGGGTATGGTTGTGATGGTTATAGGATGAAGGAAGAGAATGGTTGTGTGATGATTTGCTGGCAAGATCGTCCGTTGTACTCGGTATCGGCTTGGAGGTGTTGTAAGTAG 1416 45.55 MFQDEGTSSITSSPLQFFTMMSLSPKLGSPYPWLRELKSEERGLYLIHLLLTCANHVAVGSLDSANLALDQISHLASADGDTMQRIAAYFAEALADRILKSWPGLYKAFNSTKIPMVSEEILVKKLFFEMFPFLKLAFVLTNQAIVEAMEGEKMIHIIDLNAKETAQWLALLQVLSVRPEGPPHLRITGVHPQKEVLDQMARRLTEEAEKLDIPFQFNSVISQLEDLDMEKLRVKTGEALAINSVLQLHTLLGSDNEVLQKPSPSAAQSANGVQYSRYPHLNQTTLSELLDKDLVNGCSPSPDSVSSSALSQANATKIESFLNGLWSLTPKVMVVTEQDSNHNGLTLMDRLLEALHTYAAIFDCLESNMSRTSLERLKLEKMLFGEEIKNIIACEGAERKERHEKREKWSQRFDLAGFRHVSLSYYGMLQARSLLQGYGCDGYRMKEENGCVMICWQDRPLYSVSAWRCCK 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 58659799 58662289 + Tan0004821.1 Tan09g0798 763141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0798 471 ProSiteProfiles GRAS family profile. 37 468 IPR005202 -
Tan09g0798 471 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 467 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009739(PANTHER)|GO:0043565(PANTHER)
Tan09g0798 471 Pfam GRAS domain family 46 468 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0568 Tan-Chr4:4791626 Tan09g0798 Tan-Chr9:58659799 5.00E-169 dispersed
Tan09g0798 Tan-Chr9:58659799 Tan11g0122 Tan-Chr11:1245175 7.70E-69 dispersed
Tan09g0798 Tan-Chr9:58659799 Tan05g1662 Tan-Chr5:46198852 3.90E-28 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28300 PF03514 GRAS 1.40E-141 CL0063 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0798 - - - 0.0